Gene annotation
Transcriptome id Sobic.002G404600.1
Synonym Sb02g041900
Functional annotation expressed protein
UniProt A0A1W0W7P1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g43990.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G204200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.004G290500 actin-depolymerizing factor, putative, expressed K05765: cofilin
3 Sobic.001G089400 ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
4 Sobic.005G037700 OsFBX378 - F-box domain containing protein, expressed -
5 Sobic.004G192600 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.003G004000 - -
7 Sobic.007G197000 "Candidate orthologue to the wheat Pm40 gene, probable glucan endo-1,3-betaglucosidase A6"(PubMedID : 27755575)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
8 Sobic.002G381500 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
9 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
10 Sobic.010G016200 expressed protein -
11 Sobic.006G105100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
12 Sobic.009G110600 OsFBX422 - F-box domain containing protein, expressed -
13 Sobic.001G167300 - -
14 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.003G420500 Ca ATPase 3(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
16 Sobic.008G043200 - -
17 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
18 Sobic.009G234900 WRKY43, expressed -
19 Sobic.008G074100 - -
20 Sobic.005G145400 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G404600 Sobic002G404600 Sobic007G204200 Sobic007G204200 Sobic002G404600--Sobic007G204200 Sobic004G290500 Sobic004G290500 Sobic002G404600--Sobic004G290500 Sobic001G089400 Sobic001G089400 Sobic002G404600--Sobic001G089400 Sobic005G037700 Sobic005G037700 Sobic002G404600--Sobic005G037700 Sobic004G192600 Sobic004G192600 Sobic002G404600--Sobic004G192600 Sobic003G004000 Sobic003G004000 Sobic002G404600--Sobic003G004000 Sobic007G197000 Sobic007G197000 Sobic002G404600--Sobic007G197000 Sobic002G381500 Sobic002G381500 Sobic002G404600--Sobic002G381500 Sobic002G380300 Sobic002G380300 Sobic002G404600--Sobic002G380300 Sobic007G204200--Sobic005G037700 Sobic007G204200--Sobic004G192600 Sobic008G074100 Sobic008G074100 Sobic007G204200--Sobic008G074100 Sobic007G204200--Sobic001G089400 Sobic007G204200--Sobic003G004000 Sobic007G204200--Sobic007G197000 Sobic003G420500 Sobic003G420500 Sobic007G204200--Sobic003G420500 Sobic010G121700 Sobic010G121700 Sobic007G204200--Sobic010G121700 Sobic003G070400 Sobic003G070400 Sobic007G204200--Sobic003G070400 Sobic010G207800 Sobic010G207800 Sobic004G290500--Sobic010G207800 Sobic007G215200 Sobic007G215200 Sobic004G290500--Sobic007G215200 Sobic005G006100 Sobic005G006100 Sobic004G290500--Sobic005G006100 Sobic001G167300 Sobic001G167300 Sobic004G290500--Sobic001G167300 Sobic001G192300 Sobic001G192300 Sobic004G290500--Sobic001G192300 Sobic010G090200 Sobic010G090200 Sobic004G290500--Sobic010G090200 Sobic001G261416 Sobic001G261416 Sobic004G290500--Sobic001G261416 Sobic007G014000 Sobic007G014000 Sobic004G290500--Sobic007G014000 Sobic010G216100 Sobic010G216100 Sobic004G290500--Sobic010G216100 Sobic001G089400--Sobic004G192600 Sobic001G089400--Sobic003G004000 Sobic008G043200 Sobic008G043200 Sobic001G089400--Sobic008G043200 Sobic001G089400--Sobic001G167300 Sobic001G089400--Sobic005G037700 Sobic001G089400--Sobic010G207800 Sobic010G016200 Sobic010G016200 Sobic001G089400--Sobic010G016200 Sobic001G089400--Sobic003G420500 Sobic001G089400--Sobic007G215200 Sobic005G037700--Sobic003G420500 Sobic005G037700--Sobic001G089400 Sobic005G037700--Sobic004G192600 Sobic005G145400 Sobic005G145400 Sobic005G037700--Sobic005G145400 Sobic005G037700--Sobic007G204200 Sobic005G037700--Sobic007G197000 Sobic005G037700--Sobic003G004000 Sobic005G037700--Sobic008G043200 Sobic001G525600 Sobic001G525600 Sobic005G037700--Sobic001G525600 Sobic004G192600--Sobic001G089400 Sobic004G192600--Sobic003G004000 Sobic004G192600--Sobic001G167300 Sobic004G192600--Sobic008G043200 Sobic004G192600--Sobic005G037700 Sobic004G192600--Sobic010G207800 Sobic004G192600--Sobic003G420500 Sobic004G192600--Sobic010G016200 Sobic004G192600--Sobic007G215200 Sobic003G004000--Sobic001G167300 Sobic003G004000--Sobic004G192600 Sobic003G004000--Sobic001G089400 Sobic003G004000--Sobic008G043200 Sobic008G024200 Sobic008G024200 Sobic003G004000--Sobic008G024200 Sobic003G004000--Sobic010G207800 Sobic003G004000--Sobic010G121700 Sobic003G004000--Sobic005G006100 Sobic009G234900 Sobic009G234900 Sobic003G004000--Sobic009G234900 Sobic007G197000--Sobic005G037700 Sobic007G197000--Sobic003G420500 Sobic007G197000--Sobic004G192600 Sobic007G197000--Sobic001G089400 Sobic007G197000--Sobic003G004000 Sobic007G197000--Sobic008G043200 Sobic007G197000--Sobic007G204200 Sobic007G197000--Sobic005G145400 Sobic007G197000--Sobic001G525600 Sobic002G381500--Sobic002G404600 Sobic002G381500--Sobic007G204200 Sobic002G381500--Sobic007G197000 Sobic002G381500--Sobic005G037700 Sobic009G110600 Sobic009G110600 Sobic002G381500--Sobic009G110600 Sobic002G381500--Sobic010G121700 Sobic002G381500--Sobic004G192600 Sobic002G381500--Sobic003G004000 Sobic002G381500--Sobic001G089400 Sobic006G105100 Sobic006G105100 Sobic002G380300--Sobic006G105100 Sobic002G380300--Sobic004G290500 Sobic008G176500 Sobic008G176500 Sobic002G380300--Sobic008G176500 Sobic001G041600 Sobic001G041600 Sobic002G380300--Sobic001G041600 Sobic002G380300--Sobic010G016200 Sobic001G130500 Sobic001G130500 Sobic002G380300--Sobic001G130500 Sobic001G332000 Sobic001G332000 Sobic002G380300--Sobic001G332000 Sobic001G329200 Sobic001G329200 Sobic002G380300--Sobic001G329200 Sobic010G040400 Sobic010G040400 Sobic002G380300--Sobic010G040400
Octagon: transcription factors


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