Gene annotation
Transcriptome id Sobic.006G204500.1
Synonym Sb06g027560
Functional annotation pectinacetylesterase domain containing protein, expressed
UniProt C5YF65
Pfam PF03283
Panther DB PTHR21562 PTHR21562:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT4G19410 : Pectinacetylesterase family protein
RAP-DB (Rice) LOC_Os04g51340.1 : pectinacetylesterase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009923
Brachypodium KQJ84431
Barley HORVU2Hr1G101640.18 , HORVU2Hr1G101640.10 , HORVU2Hr1G101640.11 , HORVU2Hr1G101640.12 , HORVU2Hr1G101640.13 , HORVU2Hr1G101640.14 , HORVU2Hr1G101640.15 , HORVU2Hr1G101640.16 , HORVU2Hr1G101640.17 , HORVU2Hr1G101640.8 , HORVU2Hr1G101640.9 , HORVU2Hr1G101640.2 , HORVU2Hr1G101640.3 , HORVU2Hr1G101640.1 , HORVU2Hr1G101640.6 , HORVU2Hr1G101640.7 , HORVU2Hr1G101640.4 , HORVU2Hr1G101640.5
Wheat TraesCS2B02G457000 , TraesCS2A02G436200
Populus PNT43641 , PNT43643 , PNT43642 , PNT42835 , PNT42834 , PNT42837 , PNT42836 , PNT42838


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G061601 - -
2 Sobic.004G273600 RNA recognition motif containing protein, putative, expressed -
3 Sobic.008G020800 GASR10 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
4 Sobic.001G402900 methyltransferase domain containing protein, expressed -
5 Sobic.010G003200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
6 Sobic.002G372000 - -
7 Sobic.007G197000 "Candidate orthologue to the wheat Pm40 gene, probable glucan endo-1,3-betaglucosidase A6"(PubMedID : 27755575)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
8 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
9 Sobic.004G014200 serpin domain containing protein, putative, expressed K13963: serpin B
10 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
11 Sobic.003G297100 expressed protein -
12 Sobic.005G037700 OsFBX378 - F-box domain containing protein, expressed -
13 Sobic.006G070032 - K01193: INV, beta-fructofuranosidase
14 Sobic.005G176700 methyltransferase, putative, expressed -
15 Sobic.006G205400 villin protein, putative, expressed -
16 Sobic.003G151400 protein kinase, putative, expressed K13436: pto-interacting protein 1
17 Sobic.001G240700 - -
18 Sobic.005G145400 RNA recognition motif containing protein, putative, expressed -
19 Sobic.003G420500 Ca ATPase 3(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
20 Sobic.004G192600 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic006G204500 Sobic006G204500 Sobic009G061601 Sobic009G061601 Sobic006G204500--Sobic009G061601 Sobic004G273600 Sobic004G273600 Sobic006G204500--Sobic004G273600 Sobic008G020800 Sobic008G020800 Sobic006G204500--Sobic008G020800 Sobic001G402900 Sobic001G402900 Sobic006G204500--Sobic001G402900 Sobic010G003200 Sobic010G003200 Sobic006G204500--Sobic010G003200 Sobic002G372000 Sobic002G372000 Sobic006G204500--Sobic002G372000 Sobic007G197000 Sobic007G197000 Sobic006G204500--Sobic007G197000 Sobic002G364700 Sobic002G364700 Sobic006G204500--Sobic002G364700 Sobic004G014200 Sobic004G014200 Sobic006G204500--Sobic004G014200 Sobic007G131000 Sobic007G131000 Sobic009G061601--Sobic007G131000 Sobic007G215200 Sobic007G215200 Sobic009G061601--Sobic007G215200 Sobic001G294500 Sobic001G294500 Sobic009G061601--Sobic001G294500 Sobic003G151400 Sobic003G151400 Sobic009G061601--Sobic003G151400 Sobic006G205400 Sobic006G205400 Sobic009G061601--Sobic006G205400 Sobic005G204600 Sobic005G204600 Sobic009G061601--Sobic005G204600 Sobic001G063300 Sobic001G063300 Sobic009G061601--Sobic001G063300 Sobic010G207800 Sobic010G207800 Sobic009G061601--Sobic010G207800 Sobic001G261416 Sobic001G261416 Sobic009G061601--Sobic001G261416 Sobic010G001200 Sobic010G001200 Sobic004G273600--Sobic010G001200 Sobic002G125100 Sobic002G125100 Sobic004G273600--Sobic002G125100 Sobic002G279900 Sobic002G279900 Sobic004G273600--Sobic002G279900 Sobic005G145400 Sobic005G145400 Sobic004G273600--Sobic005G145400 Sobic001G135950 Sobic001G135950 Sobic004G273600--Sobic001G135950 Sobic004G099200 Sobic004G099200 Sobic004G273600--Sobic004G099200 Sobic009G105100 Sobic009G105100 Sobic004G273600--Sobic009G105100 Sobic002G254700 Sobic002G254700 Sobic004G273600--Sobic002G254700 Sobic004G071900 Sobic004G071900 Sobic004G273600--Sobic004G071900 Sobic005G176700 Sobic005G176700 Sobic008G020800--Sobic005G176700 Sobic001G167300 Sobic001G167300 Sobic008G020800--Sobic001G167300 Sobic005G006100 Sobic005G006100 Sobic008G020800--Sobic005G006100 Sobic007G122600 Sobic007G122600 Sobic008G020800--Sobic007G122600 Sobic006G070032 Sobic006G070032 Sobic008G020800--Sobic006G070032 Sobic008G020800--Sobic007G215200 Sobic002G194201 Sobic002G194201 Sobic008G020800--Sobic002G194201 Sobic008G020800--Sobic010G207800 Sobic002G015900 Sobic002G015900 Sobic008G020800--Sobic002G015900 Sobic001G402900--Sobic006G205400 Sobic001G093100 Sobic001G093100 Sobic001G402900--Sobic001G093100 Sobic009G175400 Sobic009G175400 Sobic001G402900--Sobic009G175400 Sobic001G402900--Sobic002G254700 Sobic005G040700 Sobic005G040700 Sobic001G402900--Sobic005G040700 Sobic010G051000 Sobic010G051000 Sobic001G402900--Sobic010G051000 Sobic010G144700 Sobic010G144700 Sobic001G402900--Sobic010G144700 Sobic001G332000 Sobic001G332000 Sobic001G402900--Sobic001G332000 Sobic001G130500 Sobic001G130500 Sobic001G402900--Sobic001G130500 Sobic010G003200--Sobic004G273600 Sobic010G003200--Sobic009G105100 Sobic010G003200--Sobic003G151400 Sobic002G295800 Sobic002G295800 Sobic010G003200--Sobic002G295800 Sobic010G252600 Sobic010G252600 Sobic010G003200--Sobic010G252600 Sobic010G003200--Sobic002G372000 Sobic005G110160 Sobic005G110160 Sobic010G003200--Sobic005G110160 Sobic001G142501 Sobic001G142501 Sobic010G003200--Sobic001G142501 Sobic005G092100 Sobic005G092100 Sobic010G003200--Sobic005G092100 Sobic002G372000--Sobic010G001200 Sobic002G384500 Sobic002G384500 Sobic002G372000--Sobic002G384500 Sobic002G372000--Sobic004G273600 Sobic002G372000--Sobic005G092100 Sobic002G372000--Sobic002G279900 Sobic006G022700 Sobic006G022700 Sobic002G372000--Sobic006G022700 Sobic002G372000--Sobic002G295800 Sobic002G372000--Sobic002G125100 Sobic002G372000--Sobic004G071900 Sobic005G037700 Sobic005G037700 Sobic007G197000--Sobic005G037700 Sobic003G420500 Sobic003G420500 Sobic007G197000--Sobic003G420500 Sobic004G192600 Sobic004G192600 Sobic007G197000--Sobic004G192600 Sobic001G089400 Sobic001G089400 Sobic007G197000--Sobic001G089400 Sobic003G004000 Sobic003G004000 Sobic007G197000--Sobic003G004000 Sobic008G043200 Sobic008G043200 Sobic007G197000--Sobic008G043200 Sobic007G204200 Sobic007G204200 Sobic007G197000--Sobic007G204200 Sobic007G197000--Sobic005G145400 Sobic001G525600 Sobic001G525600 Sobic007G197000--Sobic001G525600 Sobic002G364700--Sobic006G204500 Sobic002G364700--Sobic005G176700 Sobic001G370400 Sobic001G370400 Sobic002G364700--Sobic001G370400 Sobic006G115700 Sobic006G115700 Sobic002G364700--Sobic006G115700 Sobic002G364700--Sobic008G020800 Sobic002G307400 Sobic002G307400 Sobic002G364700--Sobic002G307400 Sobic004G100300 Sobic004G100300 Sobic002G364700--Sobic004G100300 Sobic003G070400 Sobic003G070400 Sobic002G364700--Sobic003G070400 Sobic002G364700--Sobic006G070032 Sobic007G016700 Sobic007G016700 Sobic004G014200--Sobic007G016700 Sobic004G014200--Sobic008G020800 Sobic004G014200--Sobic001G402900 Sobic004G014200--Sobic006G070032 Sobic010G098932 Sobic010G098932 Sobic004G014200--Sobic010G098932 Sobic004G014200--Sobic002G015900 Sobic004G014200--Sobic001G063300 Sobic002G194300 Sobic002G194300 Sobic004G014200--Sobic002G194300 Sobic003G351100 Sobic003G351100 Sobic004G014200--Sobic003G351100
Octagon: transcription factors


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