Gene annotation
Transcriptome id Sobic.010G003200.5
Synonym
Functional annotation pleckstrin homology domain-containing protein-related taxo, putative, expressed
UniProt A0A1W0VQY4
Pfam PF00620 PF14389 PF00169
Panther DB PTHR23176:SF38 PTHR23176
NCBI CDD KOG1853; LIS1-interacting protein NUDE
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT4G24580 : Rho GTPase activation protein (RhoGAP) with PH domain
RAP-DB (Rice) LOC_Os03g11140.1 : pleckstrin homology domain-containing protein-related taxo, putative, expressed
MaizeGDB (Corn) Zm00025a050322 , Zm00025a015348 , Zm00025a041162 , Zm00025a001654 , Zm00025a052835
Brachypodium KQK22506
Barley HORVU4Hr1G062120.11 , HORVU4Hr1G062120.10 , HORVU4Hr1G062120.13 , HORVU4Hr1G062120.12 , HORVU4Hr1G062120.14 , HORVU4Hr1G062120.16 , HORVU4Hr1G062120.19 , HORVU4Hr1G062120.18 , HORVU4Hr1G062120.3 , HORVU4Hr1G062120.2 , HORVU4Hr1G062120.5 , HORVU4Hr1G062120.4 , HORVU4Hr1G062120.7 , HORVU4Hr1G062120.6 , HORVU4Hr1G062120.1 , HORVU4Hr1G062120.9 , HORVU4Hr1G062120.8 , HORVU4Hr1G062120.31 , HORVU4Hr1G062120.30 , HORVU4Hr1G062120.29 , HORVU4Hr1G062120.24 , HORVU4Hr1G062120.25 , HORVU4Hr1G062120.26 , HORVU4Hr1G062120.27 , HORVU4Hr1G062120.20 , HORVU4Hr1G062120.21 , HORVU4Hr1G062120.22 , HORVU4Hr1G062120.23
Wheat TraesCS4B02G219700 , TraesCS4D02G220100 , TraesCS4A02G084500 , TraesCS4A02G084500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G273600 RNA recognition motif containing protein, putative, expressed -
2 Sobic.009G105100 expressed protein -
3 Sobic.003G151400 protein kinase, putative, expressed K13436: pto-interacting protein 1
4 Sobic.002G295800 STRUBBELIG-RECEPTOR FAMILY 5 precursor, putative, expressed -
5 Sobic.010G252600 cyclin-related protein, putative, expressed -
6 Sobic.002G372000 - -
7 Sobic.005G110160 - -
8 Sobic.001G142501 - -
9 Sobic.005G092100 - -
10 Sobic.007G091400 diacylglycerol kinase catalytic domain family protein, expressed K00901: dgkA, diacylglycerol kinase (ATP)
11 Sobic.010G001200 CCT/B-box zinc finger protein, putative, expressed -
12 Sobic.002G254700 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
13 Sobic.001G109900 expressed protein -
14 Sobic.009G061601 - -
15 Sobic.004G071900 expressed protein -
16 Sobic.002G279900 beta-galactosidase precursor, putative, expressed -
17 Sobic.002G125100 - -
18 Sobic.010G161400 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
19 Sobic.006G022700 OsFBD9 - F-box and FBD domain containing protein, expressed -
20 Sobic.003G438500 THION25 - Plant thionin family protein precursor, expressed -


Gene co-expression network
sample Sobic010G003200 Sobic010G003200 Sobic004G273600 Sobic004G273600 Sobic010G003200--Sobic004G273600 Sobic009G105100 Sobic009G105100 Sobic010G003200--Sobic009G105100 Sobic003G151400 Sobic003G151400 Sobic010G003200--Sobic003G151400 Sobic002G295800 Sobic002G295800 Sobic010G003200--Sobic002G295800 Sobic010G252600 Sobic010G252600 Sobic010G003200--Sobic010G252600 Sobic002G372000 Sobic002G372000 Sobic010G003200--Sobic002G372000 Sobic005G110160 Sobic005G110160 Sobic010G003200--Sobic005G110160 Sobic001G142501 Sobic001G142501 Sobic010G003200--Sobic001G142501 Sobic005G092100 Sobic005G092100 Sobic010G003200--Sobic005G092100 Sobic010G001200 Sobic010G001200 Sobic004G273600--Sobic010G001200 Sobic002G125100 Sobic002G125100 Sobic004G273600--Sobic002G125100 Sobic002G279900 Sobic002G279900 Sobic004G273600--Sobic002G279900 Sobic005G145400 Sobic005G145400 Sobic004G273600--Sobic005G145400 Sobic001G135950 Sobic001G135950 Sobic004G273600--Sobic001G135950 Sobic004G099200 Sobic004G099200 Sobic004G273600--Sobic004G099200 Sobic004G273600--Sobic009G105100 Sobic002G254700 Sobic002G254700 Sobic004G273600--Sobic002G254700 Sobic004G071900 Sobic004G071900 Sobic004G273600--Sobic004G071900 Sobic009G105100--Sobic010G252600 Sobic009G105100--Sobic004G071900 Sobic009G102700 Sobic009G102700 Sobic009G105100--Sobic009G102700 Sobic004G166100 Sobic004G166100 Sobic009G105100--Sobic004G166100 Sobic006G215500 Sobic006G215500 Sobic009G105100--Sobic006G215500 Sobic004G025500 Sobic004G025500 Sobic009G105100--Sobic004G025500 Sobic009G105100--Sobic002G125100 Sobic009G105100--Sobic001G135950 Sobic007G057600 Sobic007G057600 Sobic009G105100--Sobic007G057600 Sobic001G294500 Sobic001G294500 Sobic003G151400--Sobic001G294500 Sobic001G109900 Sobic001G109900 Sobic003G151400--Sobic001G109900 Sobic007G131000 Sobic007G131000 Sobic003G151400--Sobic007G131000 Sobic003G093100 Sobic003G093100 Sobic003G151400--Sobic003G093100 Sobic009G061601 Sobic009G061601 Sobic003G151400--Sobic009G061601 Sobic008G025400 Sobic008G025400 Sobic003G151400--Sobic008G025400 Sobic006G205400 Sobic006G205400 Sobic003G151400--Sobic006G205400 Sobic003G151400--Sobic005G092100 Sobic003G151400--Sobic002G254700 Sobic002G295800--Sobic010G252600 Sobic002G295800--Sobic009G105100 Sobic002G295800--Sobic004G166100 Sobic001G528700 Sobic001G528700 Sobic002G295800--Sobic001G528700 Sobic002G295800--Sobic009G102700 Sobic003G333100 Sobic003G333100 Sobic002G295800--Sobic003G333100 Sobic007G222500 Sobic007G222500 Sobic002G295800--Sobic007G222500 Sobic007G222400 Sobic007G222400 Sobic002G295800--Sobic007G222400 Sobic001G539700 Sobic001G539700 Sobic002G295800--Sobic001G539700 Sobic010G252600--Sobic004G166100 Sobic010G252600--Sobic001G528700 Sobic010G252600--Sobic007G222500 Sobic010G252600--Sobic007G222400 Sobic001G348600 Sobic001G348600 Sobic010G252600--Sobic001G348600 Sobic004G024000 Sobic004G024000 Sobic010G252600--Sobic004G024000 Sobic009G016700 Sobic009G016700 Sobic010G252600--Sobic009G016700 Sobic008G028300 Sobic008G028300 Sobic010G252600--Sobic008G028300 Sobic001G002200 Sobic001G002200 Sobic010G252600--Sobic001G002200 Sobic002G372000--Sobic010G001200 Sobic002G384500 Sobic002G384500 Sobic002G372000--Sobic002G384500 Sobic002G372000--Sobic004G273600 Sobic002G372000--Sobic005G092100 Sobic002G372000--Sobic002G279900 Sobic006G022700 Sobic006G022700 Sobic002G372000--Sobic006G022700 Sobic002G372000--Sobic002G295800 Sobic002G372000--Sobic002G125100 Sobic002G372000--Sobic004G071900 Sobic002G091200 Sobic002G091200 Sobic005G110160--Sobic002G091200 Sobic002G106800 Sobic002G106800 Sobic005G110160--Sobic002G106800 Sobic010G161400 Sobic010G161400 Sobic005G110160--Sobic010G161400 Sobic004G350400 Sobic004G350400 Sobic005G110160--Sobic004G350400 Sobic009G098900 Sobic009G098900 Sobic005G110160--Sobic009G098900 Sobic001G540000 Sobic001G540000 Sobic005G110160--Sobic001G540000 Sobic003G173800 Sobic003G173800 Sobic005G110160--Sobic003G173800 Sobic010G056500 Sobic010G056500 Sobic005G110160--Sobic010G056500 Sobic005G110160--Sobic004G025500 Sobic001G142501--Sobic009G105100 Sobic001G142501--Sobic006G022700 Sobic001G142501--Sobic002G125100 Sobic002G104801 Sobic002G104801 Sobic001G142501--Sobic002G104801 Sobic001G142501--Sobic004G350400 Sobic001G142501--Sobic006G215500 Sobic001G142501--Sobic005G110160 Sobic001G142501--Sobic004G071900 Sobic001G220800 Sobic001G220800 Sobic001G142501--Sobic001G220800 Sobic005G092100--Sobic003G151400 Sobic005G092100--Sobic010G001200 Sobic005G092100--Sobic001G109900 Sobic004G251900 Sobic004G251900 Sobic005G092100--Sobic004G251900 Sobic007G051100 Sobic007G051100 Sobic005G092100--Sobic007G051100 Sobic005G092100--Sobic008G025400 Sobic005G092100--Sobic006G022700 Sobic005G092100--Sobic004G025500 Sobic005G092100--Sobic009G105100
Octagon: transcription factors


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