Gene annotation
Transcriptome id Sobic.009G061601.1
Synonym -
Functional annotation -
UniProt A0A1Z5R1V4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G131000 dynamin-2B, putative, expressed K01528: dynamin 1/3
2 Sobic.007G215200 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
3 Sobic.001G294500 phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
4 Sobic.003G151400 protein kinase, putative, expressed K13436: pto-interacting protein 1
5 Sobic.006G205400 villin protein, putative, expressed -
6 Sobic.005G204600 OsMADS68 - MADS-box family gene with MIKC , type-box, expressed -
7 Sobic.001G063300 CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
8 Sobic.010G207800 E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
9 Sobic.001G261416 - K01858: INO1, myo-inositol-1-phosphate synthase
10 Sobic.001G332000 pollen allergen, putative, expressed -
11 Sobic.008G020800 GASR10 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
12 Sobic.008G043200 - -
13 Sobic.001G171300 UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
14 Sobic.005G040700 amino acid permease family protein, putative, expressed -
15 Sobic.001G329200 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
16 Sobic.010G040400 polygalacturonase, putative, expressed -
17 Sobic.001G212500 vacuolar protein sorting-associated protein 52, putative, expressed -
18 Sobic.001G130500 - -
19 Sobic.001G287400 VQ domain containing protein, putative, expressed -
20 Sobic.010G216100 leaf senescence related protein, putative, expressed -


Gene co-expression network
sample Sobic009G061601 Sobic009G061601 Sobic007G131000 Sobic007G131000 Sobic009G061601--Sobic007G131000 Sobic007G215200 Sobic007G215200 Sobic009G061601--Sobic007G215200 Sobic001G294500 Sobic001G294500 Sobic009G061601--Sobic001G294500 Sobic003G151400 Sobic003G151400 Sobic009G061601--Sobic003G151400 Sobic006G205400 Sobic006G205400 Sobic009G061601--Sobic006G205400 Sobic005G204600 Sobic005G204600 Sobic009G061601--Sobic005G204600 Sobic001G063300 Sobic001G063300 Sobic009G061601--Sobic001G063300 Sobic010G207800 Sobic010G207800 Sobic009G061601--Sobic010G207800 Sobic001G261416 Sobic001G261416 Sobic009G061601--Sobic001G261416 Sobic003G246500 Sobic003G246500 Sobic007G131000--Sobic003G246500 Sobic005G040700 Sobic005G040700 Sobic007G131000--Sobic005G040700 Sobic004G100900 Sobic004G100900 Sobic007G131000--Sobic004G100900 Sobic003G175950 Sobic003G175950 Sobic007G131000--Sobic003G175950 Sobic010G051000 Sobic010G051000 Sobic007G131000--Sobic010G051000 Sobic001G332000 Sobic001G332000 Sobic007G131000--Sobic001G332000 Sobic001G329200 Sobic001G329200 Sobic007G131000--Sobic001G329200 Sobic001G269100 Sobic001G269100 Sobic007G131000--Sobic001G269100 Sobic001G171300 Sobic001G171300 Sobic007G131000--Sobic001G171300 Sobic007G215200--Sobic010G207800 Sobic007G215200--Sobic001G261416 Sobic007G215200--Sobic001G332000 Sobic010G090200 Sobic010G090200 Sobic007G215200--Sobic010G090200 Sobic007G215200--Sobic001G329200 Sobic001G287400 Sobic001G287400 Sobic007G215200--Sobic001G287400 Sobic007G014000 Sobic007G014000 Sobic007G215200--Sobic007G014000 Sobic007G215200--Sobic001G171300 Sobic010G216100 Sobic010G216100 Sobic007G215200--Sobic010G216100 Sobic001G294500--Sobic007G131000 Sobic004G177900 Sobic004G177900 Sobic001G294500--Sobic004G177900 Sobic001G294500--Sobic003G151400 Sobic005G043300 Sobic005G043300 Sobic001G294500--Sobic005G043300 Sobic001G294500--Sobic003G246500 Sobic008G025400 Sobic008G025400 Sobic001G294500--Sobic008G025400 Sobic003G093100 Sobic003G093100 Sobic001G294500--Sobic003G093100 Sobic001G294500--Sobic005G204600 Sobic001G294500--Sobic009G061601 Sobic003G151400--Sobic001G294500 Sobic001G109900 Sobic001G109900 Sobic003G151400--Sobic001G109900 Sobic003G151400--Sobic007G131000 Sobic003G151400--Sobic003G093100 Sobic003G151400--Sobic009G061601 Sobic003G151400--Sobic008G025400 Sobic003G151400--Sobic006G205400 Sobic005G092100 Sobic005G092100 Sobic003G151400--Sobic005G092100 Sobic002G254700 Sobic002G254700 Sobic003G151400--Sobic002G254700 Sobic001G212500 Sobic001G212500 Sobic006G205400--Sobic001G212500 Sobic008G043200 Sobic008G043200 Sobic006G205400--Sobic008G043200 Sobic006G205400--Sobic002G254700 Sobic009G175400 Sobic009G175400 Sobic006G205400--Sobic009G175400 Sobic006G205400--Sobic001G063300 Sobic006G205400--Sobic001G332000 Sobic010G276100 Sobic010G276100 Sobic006G205400--Sobic010G276100 Sobic006G205400--Sobic007G215200 Sobic010G040400 Sobic010G040400 Sobic006G205400--Sobic010G040400 Sobic008G043300 Sobic008G043300 Sobic005G204600--Sobic008G043300 Sobic001G092500 Sobic001G092500 Sobic005G204600--Sobic001G092500 Sobic005G204600--Sobic001G287400 Sobic007G145500 Sobic007G145500 Sobic005G204600--Sobic007G145500 Sobic008G053750 Sobic008G053750 Sobic005G204600--Sobic008G053750 Sobic005G204600--Sobic005G040700 Sobic005G204600--Sobic007G131000 Sobic005G204600--Sobic001G171300 Sobic001G130500 Sobic001G130500 Sobic005G204600--Sobic001G130500 Sobic001G063300--Sobic001G261416 Sobic001G063300--Sobic010G090200 Sobic001G063300--Sobic010G207800 Sobic001G063300--Sobic010G216100 Sobic001G063300--Sobic007G014000 Sobic010G240300 Sobic010G240300 Sobic001G063300--Sobic010G240300 Sobic001G063300--Sobic007G215200 Sobic001G063300--Sobic001G287400 Sobic005G006100 Sobic005G006100 Sobic001G063300--Sobic005G006100 Sobic010G207800--Sobic007G014000 Sobic010G207800--Sobic007G215200 Sobic010G207800--Sobic001G261416 Sobic010G207800--Sobic010G090200 Sobic010G207800--Sobic010G216100 Sobic010G207800--Sobic005G006100 Sobic010G207800--Sobic010G240300 Sobic001G167300 Sobic001G167300 Sobic010G207800--Sobic001G167300 Sobic010G207800--Sobic001G287400 Sobic001G261416--Sobic010G090200 Sobic001G261416--Sobic001G171300 Sobic001G261416--Sobic001G287400 Sobic001G261416--Sobic001G329200 Sobic001G261416--Sobic007G014000 Sobic001G165700 Sobic001G165700 Sobic001G261416--Sobic001G165700 Sobic001G261416--Sobic010G216100 Sobic001G261416--Sobic010G207800 Sobic010G215000 Sobic010G215000 Sobic001G261416--Sobic010G215000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.