Gene annotation
Transcriptome id Sobic.001G503600.2
Synonym Sb01g047050
Functional annotation expressed protein
UniProt A0A1Z5SBD1
Pfam -
Panther DB PTHR36357 PTHR36357:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46000 : -
RAP-DB (Rice) LOC_Os03g05450.1 : expressed protein
MaizeGDB (Corn) Zm00025a053416 , Zm00025a000656
Brachypodium -
Barley HORVU4Hr1G080030.3 , HORVU4Hr1G080030.1 , HORVU4Hr1G080030.6 , HORVU4Hr1G080030.5 , HORVU4Hr1G080030.4
Wheat TraesCS4D02G311900 , TraesCS4A02G414100 , TraesCS4B02G314800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
2 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
3 Sobic.005G144000 glycosyltransferase, putative, expressed -
4 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
5 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
6 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
7 Sobic.002G340600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
8 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
9 Sobic.002G404600 expressed protein -
10 Sobic.006G105100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
11 Sobic.003G290500 profilin domain containing protein, expressed K05759: profilin
12 Sobic.003G114600 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
13 Sobic.003G441000 rhoGAP domain containing protein, expressed -
14 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G110932 - -
16 Sobic.002G283200 expressed protein -
17 Sobic.006G069766 - -
18 Sobic.003G218100 - -
19 Sobic.003G304600 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
20 Sobic.005G170400 OsFBDUF58 - F-box and DUF domain containing protein, expressed -


Gene co-expression network
sample Sobic001G503600 Sobic001G503600 Sobic001G414650 Sobic001G414650 Sobic001G503600--Sobic001G414650 Sobic008G071300 Sobic008G071300 Sobic001G503600--Sobic008G071300 Sobic005G144000 Sobic005G144000 Sobic001G503600--Sobic005G144000 Sobic009G242200 Sobic009G242200 Sobic001G503600--Sobic009G242200 Sobic002G170100 Sobic002G170100 Sobic001G503600--Sobic002G170100 Sobic001G039100 Sobic001G039100 Sobic001G503600--Sobic001G039100 Sobic002G340600 Sobic002G340600 Sobic001G503600--Sobic002G340600 Sobic002G380300 Sobic002G380300 Sobic001G503600--Sobic002G380300 Sobic002G404600 Sobic002G404600 Sobic001G503600--Sobic002G404600 Sobic001G357400 Sobic001G357400 Sobic001G414650--Sobic001G357400 Sobic001G414650--Sobic002G404600 Sobic008G055200 Sobic008G055200 Sobic001G414650--Sobic008G055200 Sobic002G381500 Sobic002G381500 Sobic001G414650--Sobic002G381500 Sobic007G070900 Sobic007G070900 Sobic001G414650--Sobic007G070900 Sobic006G105100 Sobic006G105100 Sobic001G414650--Sobic006G105100 Sobic004G054900 Sobic004G054900 Sobic001G414650--Sobic004G054900 Sobic009G110600 Sobic009G110600 Sobic001G414650--Sobic009G110600 Sobic001G337100 Sobic001G337100 Sobic001G414650--Sobic001G337100 Sobic006G267100 Sobic006G267100 Sobic008G071300--Sobic006G267100 Sobic008G071300--Sobic002G170100 Sobic003G114600 Sobic003G114600 Sobic008G071300--Sobic003G114600 Sobic002G283200 Sobic002G283200 Sobic008G071300--Sobic002G283200 Sobic003G290500 Sobic003G290500 Sobic008G071300--Sobic003G290500 Sobic008G071300--Sobic001G039100 Sobic008G071300--Sobic002G340600 Sobic008G071300--Sobic006G105100 Sobic008G071300--Sobic001G503600 Sobic003G441000 Sobic003G441000 Sobic005G144000--Sobic003G441000 Sobic005G144000--Sobic002G170100 Sobic008G122800 Sobic008G122800 Sobic005G144000--Sobic008G122800 Sobic001G279000 Sobic001G279000 Sobic005G144000--Sobic001G279000 Sobic005G144000--Sobic009G242200 Sobic005G144000--Sobic001G503600 Sobic004G180100 Sobic004G180100 Sobic005G144000--Sobic004G180100 Sobic005G144000--Sobic008G071300 Sobic005G144000--Sobic002G404600 Sobic009G242200--Sobic002G170100 Sobic009G242200--Sobic003G290500 Sobic009G242200--Sobic002G380300 Sobic006G115700 Sobic006G115700 Sobic009G242200--Sobic006G115700 Sobic003G304600 Sobic003G304600 Sobic009G242200--Sobic003G304600 Sobic004G358000 Sobic004G358000 Sobic009G242200--Sobic004G358000 Sobic007G091400 Sobic007G091400 Sobic009G242200--Sobic007G091400 Sobic003G297100 Sobic003G297100 Sobic009G242200--Sobic003G297100 Sobic001G370400 Sobic001G370400 Sobic009G242200--Sobic001G370400 Sobic002G170100--Sobic009G242200 Sobic002G170100--Sobic002G380300 Sobic005G170400 Sobic005G170400 Sobic002G170100--Sobic005G170400 Sobic002G170100--Sobic004G358000 Sobic003G218100 Sobic003G218100 Sobic002G170100--Sobic003G218100 Sobic002G170100--Sobic003G290500 Sobic002G170100--Sobic003G304600 Sobic002G170100--Sobic005G144000 Sobic002G170100--Sobic002G283200 Sobic001G039100--Sobic002G404600 Sobic007G196700 Sobic007G196700 Sobic001G039100--Sobic007G196700 Sobic001G039100--Sobic002G381500 Sobic002G308900 Sobic002G308900 Sobic001G039100--Sobic002G308900 Sobic001G039100--Sobic009G110600 Sobic001G039100--Sobic006G105100 Sobic001G039100--Sobic002G380300 Sobic001G039100--Sobic001G414650 Sobic004G290500 Sobic004G290500 Sobic001G039100--Sobic004G290500 Sobic002G340600--Sobic006G105100 Sobic002G340600--Sobic002G380300 Sobic001G041600 Sobic001G041600 Sobic002G340600--Sobic001G041600 Sobic006G005300 Sobic006G005300 Sobic002G340600--Sobic006G005300 Sobic003G445300 Sobic003G445300 Sobic002G340600--Sobic003G445300 Sobic006G074150 Sobic006G074150 Sobic002G340600--Sobic006G074150 Sobic005G220400 Sobic005G220400 Sobic002G340600--Sobic005G220400 Sobic005G207700 Sobic005G207700 Sobic002G340600--Sobic005G207700 Sobic002G340600--Sobic003G304600 Sobic002G380300--Sobic006G105100 Sobic002G380300--Sobic004G290500 Sobic008G176500 Sobic008G176500 Sobic002G380300--Sobic008G176500 Sobic002G380300--Sobic001G041600 Sobic010G016200 Sobic010G016200 Sobic002G380300--Sobic010G016200 Sobic001G130500 Sobic001G130500 Sobic002G380300--Sobic001G130500 Sobic001G332000 Sobic001G332000 Sobic002G380300--Sobic001G332000 Sobic001G329200 Sobic001G329200 Sobic002G380300--Sobic001G329200 Sobic010G040400 Sobic010G040400 Sobic002G380300--Sobic010G040400 Sobic007G204200 Sobic007G204200 Sobic002G404600--Sobic007G204200 Sobic002G404600--Sobic004G290500 Sobic001G089400 Sobic001G089400 Sobic002G404600--Sobic001G089400 Sobic005G037700 Sobic005G037700 Sobic002G404600--Sobic005G037700 Sobic004G192600 Sobic004G192600 Sobic002G404600--Sobic004G192600 Sobic003G004000 Sobic003G004000 Sobic002G404600--Sobic003G004000 Sobic007G197000 Sobic007G197000 Sobic002G404600--Sobic007G197000 Sobic002G404600--Sobic002G381500 Sobic002G404600--Sobic002G380300
Octagon: transcription factors


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