Gene annotation
Transcriptome id Sobic.003G441000.2,Sobic.003G441000.1
Synonym Sb03g047080
Functional annotation rhoGAP domain containing protein, expressed
UniProt C5XJB1
Pfam PF00786 PF00620
Panther DB PTHR23177 PTHR23177:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT4G03100 : Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
RAP-DB (Rice) LOC_Os01g73630.1 : rhoGAP domain containing protein, expressed
MaizeGDB (Corn) Zm00025a025861
Brachypodium KQK11714
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G144000 glycosyltransferase, putative, expressed -
2 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
3 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
4 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
5 Sobic.001G279000 OsFBX382 - F-box domain containing protein, expressed -
6 Sobic.004G358000 CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
7 Sobic.003G290500 profilin domain containing protein, expressed K05759: profilin
8 Sobic.008G055200 dirigent, putative, expressed -
9 Sobic.005G170400 OsFBDUF58 - F-box and DUF domain containing protein, expressed -
10 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
11 Sobic.002G404600 expressed protein -
12 Sobic.004G290500 actin-depolymerizing factor, putative, expressed K05765: cofilin
13 Sobic.006G069766 - -
14 Sobic.006G105100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
15 Sobic.004G094400 - -
16 Sobic.003G019450 - -
17 Sobic.008G176500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
18 Sobic.002G381500 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
19 Sobic.001G041600 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
20 Sobic.003G218100 - -


Gene co-expression network
sample Sobic003G441000 Sobic003G441000 Sobic005G144000 Sobic005G144000 Sobic003G441000--Sobic005G144000 Sobic001G112600 Sobic001G112600 Sobic003G441000--Sobic001G112600 Sobic002G170100 Sobic002G170100 Sobic003G441000--Sobic002G170100 Sobic009G242200 Sobic009G242200 Sobic003G441000--Sobic009G242200 Sobic001G279000 Sobic001G279000 Sobic003G441000--Sobic001G279000 Sobic004G358000 Sobic004G358000 Sobic003G441000--Sobic004G358000 Sobic003G290500 Sobic003G290500 Sobic003G441000--Sobic003G290500 Sobic008G055200 Sobic008G055200 Sobic003G441000--Sobic008G055200 Sobic005G170400 Sobic005G170400 Sobic003G441000--Sobic005G170400 Sobic005G144000--Sobic003G441000 Sobic005G144000--Sobic002G170100 Sobic008G122800 Sobic008G122800 Sobic005G144000--Sobic008G122800 Sobic005G144000--Sobic001G279000 Sobic005G144000--Sobic009G242200 Sobic001G503600 Sobic001G503600 Sobic005G144000--Sobic001G503600 Sobic004G180100 Sobic004G180100 Sobic005G144000--Sobic004G180100 Sobic008G071300 Sobic008G071300 Sobic005G144000--Sobic008G071300 Sobic002G404600 Sobic002G404600 Sobic005G144000--Sobic002G404600 Sobic005G050400 Sobic005G050400 Sobic001G112600--Sobic005G050400 Sobic001G112600--Sobic009G242200 Sobic001G112600--Sobic003G441000 Sobic001G112600--Sobic002G170100 Sobic001G414650 Sobic001G414650 Sobic001G112600--Sobic001G414650 Sobic003G244400 Sobic003G244400 Sobic001G112600--Sobic003G244400 Sobic001G112600--Sobic008G055200 Sobic001G112600--Sobic004G358000 Sobic001G112600--Sobic005G144000 Sobic002G170100--Sobic009G242200 Sobic002G380300 Sobic002G380300 Sobic002G170100--Sobic002G380300 Sobic002G170100--Sobic005G170400 Sobic002G170100--Sobic004G358000 Sobic003G218100 Sobic003G218100 Sobic002G170100--Sobic003G218100 Sobic002G170100--Sobic003G290500 Sobic003G304600 Sobic003G304600 Sobic002G170100--Sobic003G304600 Sobic002G170100--Sobic005G144000 Sobic002G283200 Sobic002G283200 Sobic002G170100--Sobic002G283200 Sobic009G242200--Sobic002G170100 Sobic009G242200--Sobic003G290500 Sobic009G242200--Sobic002G380300 Sobic006G115700 Sobic006G115700 Sobic009G242200--Sobic006G115700 Sobic009G242200--Sobic003G304600 Sobic009G242200--Sobic004G358000 Sobic007G091400 Sobic007G091400 Sobic009G242200--Sobic007G091400 Sobic003G297100 Sobic003G297100 Sobic009G242200--Sobic003G297100 Sobic001G370400 Sobic001G370400 Sobic009G242200--Sobic001G370400 Sobic003G013900 Sobic003G013900 Sobic001G279000--Sobic003G013900 Sobic001G279000--Sobic002G380300 Sobic008G176500 Sobic008G176500 Sobic001G279000--Sobic008G176500 Sobic003G019450 Sobic003G019450 Sobic001G279000--Sobic003G019450 Sobic001G279000--Sobic007G091400 Sobic006G236400 Sobic006G236400 Sobic001G279000--Sobic006G236400 Sobic001G279000--Sobic001G370400 Sobic010G016200 Sobic010G016200 Sobic001G279000--Sobic010G016200 Sobic001G279000--Sobic003G304600 Sobic004G358000--Sobic002G170100 Sobic004G358000--Sobic007G091400 Sobic001G103100 Sobic001G103100 Sobic004G358000--Sobic001G103100 Sobic004G358000--Sobic009G242200 Sobic004G358000--Sobic003G290500 Sobic004G358000--Sobic003G218100 Sobic004G358000--Sobic003G304600 Sobic004G358000--Sobic002G380300 Sobic004G358000--Sobic008G176500 Sobic003G290500--Sobic002G380300 Sobic006G105100 Sobic006G105100 Sobic003G290500--Sobic006G105100 Sobic001G041600 Sobic001G041600 Sobic003G290500--Sobic001G041600 Sobic003G290500--Sobic003G304600 Sobic003G290500--Sobic008G176500 Sobic003G290500--Sobic002G283200 Sobic007G222100 Sobic007G222100 Sobic003G290500--Sobic007G222100 Sobic010G051000 Sobic010G051000 Sobic003G290500--Sobic010G051000 Sobic009G203900 Sobic009G203900 Sobic003G290500--Sobic009G203900 Sobic005G176700 Sobic005G176700 Sobic008G055200--Sobic005G176700 Sobic005G148000 Sobic005G148000 Sobic008G055200--Sobic005G148000 Sobic005G040100 Sobic005G040100 Sobic008G055200--Sobic005G040100 Sobic001G192300 Sobic001G192300 Sobic008G055200--Sobic001G192300 Sobic004G094400 Sobic004G094400 Sobic008G055200--Sobic004G094400 Sobic001G143700 Sobic001G143700 Sobic008G055200--Sobic001G143700 Sobic002G006200 Sobic002G006200 Sobic008G055200--Sobic002G006200 Sobic002G097300 Sobic002G097300 Sobic008G055200--Sobic002G097300 Sobic008G138400 Sobic008G138400 Sobic008G055200--Sobic008G138400 Sobic010G111000 Sobic010G111000 Sobic005G170400--Sobic010G111000 Sobic005G170400--Sobic001G041600 Sobic005G170400--Sobic008G176500 Sobic010G098932 Sobic010G098932 Sobic005G170400--Sobic010G098932 Sobic005G207700 Sobic005G207700 Sobic005G170400--Sobic005G207700 Sobic005G170400--Sobic002G380300 Sobic006G043101 Sobic006G043101 Sobic005G170400--Sobic006G043101 Sobic008G125801 Sobic008G125801 Sobic005G170400--Sobic008G125801 Sobic005G214800 Sobic005G214800 Sobic005G170400--Sobic005G214800
Octagon: transcription factors


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