Gene annotation
Transcriptome id Sobic.005G170400.2
Synonym
Functional annotation OsFBDUF58 - F-box and DUF domain containing protein, expressed
UniProt A0A1Z5RJK0
Pfam PF03478
Panther DB PTHR11102:SF101 PTHR11102
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G03560 : F-box family protein with a domain of unknown function (DUF295)
RAP-DB (Rice) LOC_Os11g38140.1 : OsFBDUF58 - F-box and DUF domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G111000 - -
2 Sobic.001G041600 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
3 Sobic.008G176500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.010G098932 - -
5 Sobic.005G207700 - -
6 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
7 Sobic.006G043101 - -
8 Sobic.008G125801 - -
9 Sobic.005G214800 - -
10 Sobic.001G246001 - K10523: speckle-type POZ protein
11 Sobic.007G160501 - -
12 Sobic.002G414000 - -
13 Sobic.009G110800 OsFBX430 - F-box domain containing protein, expressed -
14 Sobic.001G269200 "GDSL-like lipase/acylhydrolase, is the most likely gene associated with epicuticular wax deposition."(PubMedID : 28702690)@GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.006G020400 expressed protein -
16 Sobic.003G445300 aquaporin protein, putative, expressed K09873: aquaporin TIP
17 Sobic.005G220400 pollen allergen, putative, expressed -
18 Sobic.003G351100 - -
19 Sobic.005G220500 pollen allergen, putative, expressed -
20 Sobic.002G082400 DUF567 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G170400 Sobic005G170400 Sobic010G111000 Sobic010G111000 Sobic005G170400--Sobic010G111000 Sobic001G041600 Sobic001G041600 Sobic005G170400--Sobic001G041600 Sobic008G176500 Sobic008G176500 Sobic005G170400--Sobic008G176500 Sobic010G098932 Sobic010G098932 Sobic005G170400--Sobic010G098932 Sobic005G207700 Sobic005G207700 Sobic005G170400--Sobic005G207700 Sobic002G380300 Sobic002G380300 Sobic005G170400--Sobic002G380300 Sobic006G043101 Sobic006G043101 Sobic005G170400--Sobic006G043101 Sobic008G125801 Sobic008G125801 Sobic005G170400--Sobic008G125801 Sobic005G214800 Sobic005G214800 Sobic005G170400--Sobic005G214800 Sobic010G034400 Sobic010G034400 Sobic010G111000--Sobic010G034400 Sobic001G094700 Sobic001G094700 Sobic010G111000--Sobic001G094700 Sobic002G082400 Sobic002G082400 Sobic001G041600--Sobic002G082400 Sobic005G220500 Sobic005G220500 Sobic001G041600--Sobic005G220500 Sobic003G445300 Sobic003G445300 Sobic001G041600--Sobic003G445300 Sobic003G175600 Sobic003G175600 Sobic001G041600--Sobic003G175600 Sobic005G220400 Sobic005G220400 Sobic001G041600--Sobic005G220400 Sobic001G269200 Sobic001G269200 Sobic001G041600--Sobic001G269200 Sobic009G203900 Sobic009G203900 Sobic001G041600--Sobic009G203900 Sobic004G293300 Sobic004G293300 Sobic001G041600--Sobic004G293300 Sobic002G053800 Sobic002G053800 Sobic001G041600--Sobic002G053800 Sobic008G176500--Sobic001G041600 Sobic003G304600 Sobic003G304600 Sobic008G176500--Sobic003G304600 Sobic008G176500--Sobic009G203900 Sobic007G222100 Sobic007G222100 Sobic008G176500--Sobic007G222100 Sobic008G176500--Sobic002G053800 Sobic008G176500--Sobic004G293300 Sobic001G130500 Sobic001G130500 Sobic008G176500--Sobic001G130500 Sobic010G051000 Sobic010G051000 Sobic008G176500--Sobic010G051000 Sobic001G024900 Sobic001G024900 Sobic008G176500--Sobic001G024900 Sobic010G098932--Sobic001G269200 Sobic010G107800 Sobic010G107800 Sobic010G098932--Sobic010G107800 Sobic002G414000 Sobic002G414000 Sobic010G098932--Sobic002G414000 Sobic010G098932--Sobic006G043101 Sobic010G098932--Sobic005G220500 Sobic007G129800 Sobic007G129800 Sobic010G098932--Sobic007G129800 Sobic010G098932--Sobic005G214800 Sobic001G246001 Sobic001G246001 Sobic010G098932--Sobic001G246001 Sobic007G167000 Sobic007G167000 Sobic010G098932--Sobic007G167000 Sobic009G110800 Sobic009G110800 Sobic005G207700--Sobic009G110800 Sobic005G207700--Sobic006G043101 Sobic005G207700--Sobic002G414000 Sobic005G207700--Sobic005G214800 Sobic005G207700--Sobic001G246001 Sobic005G207700--Sobic001G269200 Sobic005G207700--Sobic005G220500 Sobic005G207700--Sobic010G107800 Sobic005G207700--Sobic003G445300 Sobic006G105100 Sobic006G105100 Sobic002G380300--Sobic006G105100 Sobic004G290500 Sobic004G290500 Sobic002G380300--Sobic004G290500 Sobic002G380300--Sobic008G176500 Sobic002G380300--Sobic001G041600 Sobic010G016200 Sobic010G016200 Sobic002G380300--Sobic010G016200 Sobic002G380300--Sobic001G130500 Sobic001G332000 Sobic001G332000 Sobic002G380300--Sobic001G332000 Sobic001G329200 Sobic001G329200 Sobic002G380300--Sobic001G329200 Sobic010G040400 Sobic010G040400 Sobic002G380300--Sobic010G040400 Sobic006G043101--Sobic002G414000 Sobic006G043101--Sobic005G214800 Sobic006G043101--Sobic001G246001 Sobic006G043101--Sobic001G269200 Sobic006G043101--Sobic005G220400 Sobic006G043101--Sobic003G445300 Sobic006G043101--Sobic005G220500 Sobic006G043101--Sobic010G107800 Sobic006G043101--Sobic002G082400 Sobic007G160501 Sobic007G160501 Sobic008G125801--Sobic007G160501 Sobic006G020400 Sobic006G020400 Sobic008G125801--Sobic006G020400 Sobic003G351100 Sobic003G351100 Sobic008G125801--Sobic003G351100 Sobic008G125801--Sobic001G246001 Sobic008G125801--Sobic005G214800 Sobic008G125801--Sobic009G110800 Sobic010G215000 Sobic010G215000 Sobic008G125801--Sobic010G215000 Sobic002G194300 Sobic002G194300 Sobic008G125801--Sobic002G194300 Sobic008G125801--Sobic002G414000 Sobic005G214800--Sobic001G246001 Sobic005G214800--Sobic002G414000 Sobic005G214800--Sobic007G160501 Sobic005G214800--Sobic006G043101 Sobic005G214800--Sobic009G110800 Sobic005G214800--Sobic003G445300 Sobic005G214800--Sobic005G220400 Sobic005G214800--Sobic005G220500 Sobic005G214800--Sobic001G269200
Octagon: transcription factors


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