Gene annotation
Transcriptome id Sobic.003G290500.1
Synonym Sb03g034110, PRF5
Functional annotation profilin domain containing protein, expressed
UniProt C5XJ77
Pfam PF00235
Panther DB PTHR11604 PTHR11604:SF8
NCBI CDD KOG1755; Profilin
KEGG Orthology K05759; profilin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G19770 : profilin 5
RAP-DB (Rice) LOC_Os10g17660.1 : profilin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020214 , Zm00025a040078 , Zm00025a037986 , Zm00025a044310 , Zm00025a027661 , Zm00025a040077
Brachypodium KQK09648 , KQK19606 , KQK05308
Barley HORVU5Hr1G053460.1 , HORVU1Hr1G075600.2 , HORVU3Hr1G070510.1 , HORVU3Hr1G070510.2 , HORVU3Hr1G070510.3 , HORVU3Hr1G070490.5 , HORVU3Hr1G070490.4 , HORVU3Hr1G070490.6 , HORVU3Hr1G070490.1 , HORVU3Hr1G070490.3 , HORVU3Hr1G070490.2 , HORVU7Hr1G022570.1 , HORVU7Hr1G022570.2 , HORVU1Hr1G075570.3 , HORVU1Hr1G075570.2 , HORVU1Hr1G075570.5 , HORVU1Hr1G075570.4
Wheat TraesCS1A02G343400 , TraesCS1A02G343400 , TraesCS7A02G107400 , TraesCS3D02G277200 , TraesCS3A02G277000 , TraesCS1B02G356700 , TraesCS3B02G311200
Populus -


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cDNA sequences
Sobic.003G290500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
2 Sobic.006G105100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
3 Sobic.001G041600 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
4 Sobic.003G304600 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
5 Sobic.008G176500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
6 Sobic.002G283200 expressed protein -
7 Sobic.007G222100 - -
8 Sobic.010G051000 "domain confirmed by Pfam database, expressed in flower, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
9 Sobic.009G203900 profilin domain containing protein, expressed K05759: profilin
10 Sobic.001G024900 expressed protein -
11 Sobic.001G306500 expansin precursor, putative, expressed -
12 Sobic.001G288400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
13 Sobic.003G175950 - -
14 Sobic.010G091800 expressed protein -
15 Sobic.001G269800 - -
16 Sobic.001G093100 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
17 Sobic.003G175600 plant protein of unknown function domain containing protein, expressed -
18 Sobic.001G306400 expansin precursor, putative, expressed -
19 Sobic.001G130500 - -
20 Sobic.010G040400 polygalacturonase, putative, expressed -


Gene co-expression network
sample Sobic003G290500 Sobic003G290500 Sobic002G380300 Sobic002G380300 Sobic003G290500--Sobic002G380300 Sobic006G105100 Sobic006G105100 Sobic003G290500--Sobic006G105100 Sobic001G041600 Sobic001G041600 Sobic003G290500--Sobic001G041600 Sobic003G304600 Sobic003G304600 Sobic003G290500--Sobic003G304600 Sobic008G176500 Sobic008G176500 Sobic003G290500--Sobic008G176500 Sobic002G283200 Sobic002G283200 Sobic003G290500--Sobic002G283200 Sobic007G222100 Sobic007G222100 Sobic003G290500--Sobic007G222100 Sobic010G051000 Sobic010G051000 Sobic003G290500--Sobic010G051000 Sobic009G203900 Sobic009G203900 Sobic003G290500--Sobic009G203900 Sobic002G380300--Sobic006G105100 Sobic004G290500 Sobic004G290500 Sobic002G380300--Sobic004G290500 Sobic002G380300--Sobic008G176500 Sobic002G380300--Sobic001G041600 Sobic010G016200 Sobic010G016200 Sobic002G380300--Sobic010G016200 Sobic001G130500 Sobic001G130500 Sobic002G380300--Sobic001G130500 Sobic001G332000 Sobic001G332000 Sobic002G380300--Sobic001G332000 Sobic001G329200 Sobic001G329200 Sobic002G380300--Sobic001G329200 Sobic010G040400 Sobic010G040400 Sobic002G380300--Sobic010G040400 Sobic006G105100--Sobic002G380300 Sobic006G105100--Sobic004G290500 Sobic001G261416 Sobic001G261416 Sobic006G105100--Sobic001G261416 Sobic006G105100--Sobic001G329200 Sobic010G090200 Sobic010G090200 Sobic006G105100--Sobic010G090200 Sobic006G105100--Sobic001G041600 Sobic006G105100--Sobic001G332000 Sobic001G171300 Sobic001G171300 Sobic006G105100--Sobic001G171300 Sobic001G287400 Sobic001G287400 Sobic006G105100--Sobic001G287400 Sobic002G082400 Sobic002G082400 Sobic001G041600--Sobic002G082400 Sobic005G220500 Sobic005G220500 Sobic001G041600--Sobic005G220500 Sobic003G445300 Sobic003G445300 Sobic001G041600--Sobic003G445300 Sobic003G175600 Sobic003G175600 Sobic001G041600--Sobic003G175600 Sobic005G220400 Sobic005G220400 Sobic001G041600--Sobic005G220400 Sobic001G269200 Sobic001G269200 Sobic001G041600--Sobic001G269200 Sobic001G041600--Sobic009G203900 Sobic004G293300 Sobic004G293300 Sobic001G041600--Sobic004G293300 Sobic002G053800 Sobic002G053800 Sobic001G041600--Sobic002G053800 Sobic001G306400 Sobic001G306400 Sobic003G304600--Sobic001G306400 Sobic003G304600--Sobic008G176500 Sobic008G154300 Sobic008G154300 Sobic003G304600--Sobic008G154300 Sobic005G142400 Sobic005G142400 Sobic003G304600--Sobic005G142400 Sobic010G091800 Sobic010G091800 Sobic003G304600--Sobic010G091800 Sobic008G017500 Sobic008G017500 Sobic003G304600--Sobic008G017500 Sobic003G246500 Sobic003G246500 Sobic003G304600--Sobic003G246500 Sobic003G304600--Sobic002G053800 Sobic001G269800 Sobic001G269800 Sobic003G304600--Sobic001G269800 Sobic008G176500--Sobic001G041600 Sobic008G176500--Sobic003G304600 Sobic008G176500--Sobic009G203900 Sobic008G176500--Sobic007G222100 Sobic008G176500--Sobic002G053800 Sobic008G176500--Sobic004G293300 Sobic008G176500--Sobic001G130500 Sobic008G176500--Sobic010G051000 Sobic001G024900 Sobic001G024900 Sobic008G176500--Sobic001G024900 Sobic003G114600 Sobic003G114600 Sobic002G283200--Sobic003G114600 Sobic001G024800 Sobic001G024800 Sobic002G283200--Sobic001G024800 Sobic006G263500 Sobic006G263500 Sobic002G283200--Sobic006G263500 Sobic010G006900 Sobic010G006900 Sobic002G283200--Sobic010G006900 Sobic005G025600 Sobic005G025600 Sobic002G283200--Sobic005G025600 Sobic001G452500 Sobic001G452500 Sobic002G283200--Sobic001G452500 Sobic008G027900 Sobic008G027900 Sobic002G283200--Sobic008G027900 Sobic005G023700 Sobic005G023700 Sobic002G283200--Sobic005G023700 Sobic001G252900 Sobic001G252900 Sobic002G283200--Sobic001G252900 Sobic007G222100--Sobic001G024900 Sobic007G222100--Sobic010G051000 Sobic001G306500 Sobic001G306500 Sobic007G222100--Sobic001G306500 Sobic007G222100--Sobic009G203900 Sobic001G288400 Sobic001G288400 Sobic007G222100--Sobic001G288400 Sobic004G100900 Sobic004G100900 Sobic007G222100--Sobic004G100900 Sobic007G222100--Sobic001G269800 Sobic005G040700 Sobic005G040700 Sobic007G222100--Sobic005G040700 Sobic007G222100--Sobic001G306400 Sobic010G051000--Sobic007G222100 Sobic010G051000--Sobic001G306500 Sobic010G051000--Sobic001G024900 Sobic010G051000--Sobic001G288400 Sobic010G051000--Sobic005G040700 Sobic010G051000--Sobic009G203900 Sobic003G175950 Sobic003G175950 Sobic010G051000--Sobic003G175950 Sobic010G051000--Sobic001G130500 Sobic010G051000--Sobic004G100900 Sobic009G203900--Sobic007G222100 Sobic009G203900--Sobic002G053800 Sobic009G203900--Sobic001G024900 Sobic009G203900--Sobic010G051000 Sobic009G203900--Sobic003G175600 Sobic009G203900--Sobic004G293300 Sobic009G203900--Sobic001G306500 Sobic009G203900--Sobic001G269800 Sobic009G203900--Sobic010G091800
Octagon: transcription factors


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