Gene annotation
Transcriptome id Sobic.002G283200.2
Synonym Sb02g031590
Functional annotation expressed protein
UniProt A0A1W0W615
Pfam PF04788
Panther DB PTHR31300 PTHR31300:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G66740 : Protein of unknown function (DUF620)
RAP-DB (Rice) LOC_Os01g55795.1 : expressed protein
MaizeGDB (Corn) Zm00025a027449 , Zm00025a039959 , Zm00025a001765 , Zm00025a052787
Brachypodium KQK22407 , KQK09883
Barley HORVU3Hr1G073950.1 , HORVU3Hr1G073950.3 , HORVU3Hr1G073950.2 , HORVU3Hr1G073950.5 , HORVU3Hr1G073950.4
Wheat TraesCS3A02G302500 , TraesCS3B02G333900 , TraesCS4B02G211300 , TraesCS4D02G211900 , TraesCS3D02G299300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G114600 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
2 Sobic.001G024800 uncharacterized Cys-rich domain containing protein, putative, expressed -
3 Sobic.006G263500 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.010G006900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
5 Sobic.005G025600 plant invertase/pectin methylesterase inhibitor domain containing protein, expressed -
6 Sobic.001G452500 MA3 domain-containing protein("PubMedID : 26759170,PubMedID : 24597475")@MA3 domain containing protein, expressed -
7 Sobic.008G027900 pollen allergen, putative, expressed -
8 Sobic.005G023700 pollen allergen Cyn d 23, putative, expressed -
9 Sobic.001G252900 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
10 Sobic.006G259100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
11 Sobic.003G290500 profilin domain containing protein, expressed K05759: profilin
12 Sobic.004G002800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
13 Sobic.004G029032 - -
14 Sobic.007G057600 - -
15 Sobic.006G159000 OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed -
16 Sobic.001G412900 - -
17 Sobic.008G028000 pollen allergen, putative, expressed -
18 Sobic.002G150400 harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.009G091600 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
20 Sobic.001G348600 patatin, putative, expressed -


Gene co-expression network
sample Sobic002G283200 Sobic002G283200 Sobic003G114600 Sobic003G114600 Sobic002G283200--Sobic003G114600 Sobic001G024800 Sobic001G024800 Sobic002G283200--Sobic001G024800 Sobic006G263500 Sobic006G263500 Sobic002G283200--Sobic006G263500 Sobic010G006900 Sobic010G006900 Sobic002G283200--Sobic010G006900 Sobic005G025600 Sobic005G025600 Sobic002G283200--Sobic005G025600 Sobic001G452500 Sobic001G452500 Sobic002G283200--Sobic001G452500 Sobic008G027900 Sobic008G027900 Sobic002G283200--Sobic008G027900 Sobic005G023700 Sobic005G023700 Sobic002G283200--Sobic005G023700 Sobic001G252900 Sobic001G252900 Sobic002G283200--Sobic001G252900 Sobic003G114600--Sobic002G283200 Sobic003G114600--Sobic001G024800 Sobic004G024000 Sobic004G024000 Sobic003G114600--Sobic004G024000 Sobic002G150400 Sobic002G150400 Sobic003G114600--Sobic002G150400 Sobic004G134600 Sobic004G134600 Sobic003G114600--Sobic004G134600 Sobic004G029032 Sobic004G029032 Sobic003G114600--Sobic004G029032 Sobic008G028200 Sobic008G028200 Sobic003G114600--Sobic008G028200 Sobic006G171500 Sobic006G171500 Sobic003G114600--Sobic006G171500 Sobic010G229801 Sobic010G229801 Sobic003G114600--Sobic010G229801 Sobic001G024800--Sobic002G150400 Sobic008G119501 Sobic008G119501 Sobic001G024800--Sobic008G119501 Sobic001G024800--Sobic004G029032 Sobic003G400000 Sobic003G400000 Sobic001G024800--Sobic003G400000 Sobic001G024800--Sobic006G171500 Sobic006G282000 Sobic006G282000 Sobic001G024800--Sobic006G282000 Sobic002G066300 Sobic002G066300 Sobic001G024800--Sobic002G066300 Sobic001G348600 Sobic001G348600 Sobic001G024800--Sobic001G348600 Sobic009G091600 Sobic009G091600 Sobic001G024800--Sobic009G091600 Sobic006G263500--Sobic010G006900 Sobic006G263500--Sobic005G025600 Sobic006G263500--Sobic005G023700 Sobic006G263500--Sobic008G027900 Sobic008G028000 Sobic008G028000 Sobic006G263500--Sobic008G028000 Sobic006G159000 Sobic006G159000 Sobic006G263500--Sobic006G159000 Sobic004G002800 Sobic004G002800 Sobic006G263500--Sobic004G002800 Sobic006G263500--Sobic009G091600 Sobic006G263500--Sobic004G029032 Sobic010G006900--Sobic006G263500 Sobic010G006900--Sobic005G023700 Sobic010G006900--Sobic005G025600 Sobic010G006900--Sobic008G027900 Sobic010G006900--Sobic006G159000 Sobic010G006900--Sobic008G028000 Sobic010G006900--Sobic009G091600 Sobic010G006900--Sobic002G066300 Sobic010G006900--Sobic004G002800 Sobic005G025600--Sobic006G263500 Sobic005G025600--Sobic004G002800 Sobic005G025600--Sobic010G006900 Sobic005G025600--Sobic006G159000 Sobic005G025600--Sobic005G023700 Sobic005G025600--Sobic001G252900 Sobic003G335200 Sobic003G335200 Sobic005G025600--Sobic003G335200 Sobic005G025600--Sobic008G028000 Sobic005G025600--Sobic008G027900 Sobic001G452500--Sobic006G171500 Sobic001G452500--Sobic001G348600 Sobic001G452500--Sobic004G029032 Sobic001G452500--Sobic008G028200 Sobic001G452500--Sobic006G263500 Sobic001G452500--Sobic002G150400 Sobic001G452500--Sobic001G024800 Sobic001G452500--Sobic008G027900 Sobic007G222500 Sobic007G222500 Sobic001G452500--Sobic007G222500 Sobic008G027900--Sobic009G091600 Sobic008G027900--Sobic010G006900 Sobic008G027900--Sobic006G263500 Sobic008G027900--Sobic008G028000 Sobic008G027900--Sobic005G023700 Sobic008G027900--Sobic004G029032 Sobic008G027900--Sobic005G025600 Sobic008G027900--Sobic003G400000 Sobic008G027900--Sobic002G066300 Sobic005G023700--Sobic010G006900 Sobic005G023700--Sobic006G263500 Sobic005G023700--Sobic008G027900 Sobic005G023700--Sobic005G025600 Sobic005G023700--Sobic002G066300 Sobic005G023700--Sobic006G159000 Sobic005G023700--Sobic008G028000 Sobic005G023700--Sobic003G335200 Sobic005G023700--Sobic009G091600 Sobic001G252900--Sobic004G002800 Sobic009G082900 Sobic009G082900 Sobic001G252900--Sobic009G082900 Sobic001G252900--Sobic005G025600 Sobic003G073540 Sobic003G073540 Sobic001G252900--Sobic003G073540 Sobic001G252900--Sobic007G222500 Sobic001G252900--Sobic006G263500 Sobic001G252900--Sobic003G335200 Sobic001G252900--Sobic010G006900 Sobic001G528700 Sobic001G528700 Sobic001G252900--Sobic001G528700
Octagon: transcription factors


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