Gene annotation
Transcriptome id Sobic.001G452500.1
Synonym Sb01g042530
Functional annotation MA3 domain-containing protein( (PubMedID : 26759170,(PubMedID : 24597475)
MA3 domain containing protein, expressed
UniProt C5WSP1
Pfam PF02847
Panther DB PTHR12626 PTHR12626:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G22730 : MA3 domain-containing protein
RAP-DB (Rice) LOC_Os03g12180.1 : MA3 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a001346
Brachypodium KQK22835
Barley HORVU4Hr1G067080.1 , HORVU4Hr1G067080.2
Wheat TraesCS4A02G064600 , TraesCS4B02G242000 , TraesCS4D02G241600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G171500 ZOS4-09 - C2H2 zinc finger protein, expressed -
2 Sobic.001G348600 patatin, putative, expressed -
3 Sobic.004G029032 - -
4 Sobic.008G028200 pollen allergen, putative, expressed -
5 Sobic.006G263500 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.002G150400 harpin-induced protein 1 domain containing protein, expressed -
7 Sobic.001G024800 uncharacterized Cys-rich domain containing protein, putative, expressed -
8 Sobic.008G027900 pollen allergen, putative, expressed -
9 Sobic.007G222500 - -
10 Sobic.001G252900 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
11 Sobic.003G400000 signal peptide peptidase-like 2B, putative, expressed -
12 Sobic.005G025600 plant invertase/pectin methylesterase inhibitor domain containing protein, expressed -
13 Sobic.010G006900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
14 Sobic.005G023700 pollen allergen Cyn d 23, putative, expressed -
15 Sobic.008G028000 pollen allergen, putative, expressed -
16 Sobic.004G002800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
17 Sobic.006G026200 gamma-thionin family domain containing protein, expressed -
18 Sobic.009G091600 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.003G335200 monocopper oxidase, putative, expressed -
20 Sobic.003G073540 - -


Gene co-expression network
sample Sobic001G452500 Sobic001G452500 Sobic006G171500 Sobic006G171500 Sobic001G452500--Sobic006G171500 Sobic001G348600 Sobic001G348600 Sobic001G452500--Sobic001G348600 Sobic004G029032 Sobic004G029032 Sobic001G452500--Sobic004G029032 Sobic008G028200 Sobic008G028200 Sobic001G452500--Sobic008G028200 Sobic006G263500 Sobic006G263500 Sobic001G452500--Sobic006G263500 Sobic002G150400 Sobic002G150400 Sobic001G452500--Sobic002G150400 Sobic001G024800 Sobic001G024800 Sobic001G452500--Sobic001G024800 Sobic008G027900 Sobic008G027900 Sobic001G452500--Sobic008G027900 Sobic007G222500 Sobic007G222500 Sobic001G452500--Sobic007G222500 Sobic006G171500--Sobic001G348600 Sobic006G171500--Sobic004G029032 Sobic006G171500--Sobic008G028200 Sobic006G171500--Sobic002G150400 Sobic003G400000 Sobic003G400000 Sobic006G171500--Sobic003G400000 Sobic006G171500--Sobic008G027900 Sobic006G171500--Sobic001G024800 Sobic002G140500 Sobic002G140500 Sobic006G171500--Sobic002G140500 Sobic001G002200 Sobic001G002200 Sobic006G171500--Sobic001G002200 Sobic001G348600--Sobic006G171500 Sobic001G348600--Sobic008G028200 Sobic001G348600--Sobic004G029032 Sobic001G348600--Sobic007G222500 Sobic001G228000 Sobic001G228000 Sobic001G348600--Sobic001G228000 Sobic001G348600--Sobic002G150400 Sobic001G348600--Sobic002G140500 Sobic001G348600--Sobic001G002200 Sobic008G027800 Sobic008G027800 Sobic001G348600--Sobic008G027800 Sobic004G029032--Sobic006G171500 Sobic004G029032--Sobic003G400000 Sobic004G029032--Sobic008G027900 Sobic009G091600 Sobic009G091600 Sobic004G029032--Sobic009G091600 Sobic004G029032--Sobic001G348600 Sobic004G029032--Sobic002G150400 Sobic004G029032--Sobic006G263500 Sobic004G029032--Sobic008G028200 Sobic004G029032--Sobic001G024800 Sobic008G028200--Sobic006G171500 Sobic010G093600 Sobic010G093600 Sobic008G028200--Sobic010G093600 Sobic008G028200--Sobic008G027800 Sobic008G028200--Sobic001G348600 Sobic008G028200--Sobic002G150400 Sobic008G028200--Sobic001G002200 Sobic008G028200--Sobic004G029032 Sobic008G028200--Sobic002G140500 Sobic009G016700 Sobic009G016700 Sobic008G028200--Sobic009G016700 Sobic010G006900 Sobic010G006900 Sobic006G263500--Sobic010G006900 Sobic005G025600 Sobic005G025600 Sobic006G263500--Sobic005G025600 Sobic005G023700 Sobic005G023700 Sobic006G263500--Sobic005G023700 Sobic006G263500--Sobic008G027900 Sobic008G028000 Sobic008G028000 Sobic006G263500--Sobic008G028000 Sobic006G159000 Sobic006G159000 Sobic006G263500--Sobic006G159000 Sobic004G002800 Sobic004G002800 Sobic006G263500--Sobic004G002800 Sobic006G263500--Sobic009G091600 Sobic006G263500--Sobic004G029032 Sobic002G150400--Sobic008G028200 Sobic002G150400--Sobic006G171500 Sobic002G150400--Sobic004G029032 Sobic002G150400--Sobic001G024800 Sobic002G150400--Sobic001G348600 Sobic002G150400--Sobic001G002200 Sobic002G150400--Sobic003G400000 Sobic002G150400--Sobic008G027800 Sobic002G150400--Sobic001G228000 Sobic001G024800--Sobic002G150400 Sobic008G119501 Sobic008G119501 Sobic001G024800--Sobic008G119501 Sobic001G024800--Sobic004G029032 Sobic001G024800--Sobic003G400000 Sobic001G024800--Sobic006G171500 Sobic006G282000 Sobic006G282000 Sobic001G024800--Sobic006G282000 Sobic002G066300 Sobic002G066300 Sobic001G024800--Sobic002G066300 Sobic001G024800--Sobic001G348600 Sobic001G024800--Sobic009G091600 Sobic008G027900--Sobic009G091600 Sobic008G027900--Sobic010G006900 Sobic008G027900--Sobic006G263500 Sobic008G027900--Sobic008G028000 Sobic008G027900--Sobic005G023700 Sobic008G027900--Sobic004G029032 Sobic008G027900--Sobic005G025600 Sobic008G027900--Sobic003G400000 Sobic008G027900--Sobic002G066300 Sobic001G528700 Sobic001G528700 Sobic007G222500--Sobic001G528700 Sobic001G252900 Sobic001G252900 Sobic007G222500--Sobic001G252900 Sobic007G222500--Sobic001G348600 Sobic007G222500--Sobic008G028200 Sobic007G057600 Sobic007G057600 Sobic007G222500--Sobic007G057600 Sobic007G222500--Sobic004G002800 Sobic007G222500--Sobic006G171500 Sobic004G166100 Sobic004G166100 Sobic007G222500--Sobic004G166100 Sobic007G222500--Sobic001G228000
Octagon: transcription factors


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