Gene annotation
Transcriptome id Sobic.002G170100.1
Synonym Sb02g021780, UGE5
Functional annotation NAD dependent epimerase/dehydratase family protein, putative, expressed
UniProt C5X9S7
Pfam PF01073
Panther DB PTHR10366 PTHR10366:SF416
NCBI CDD -
KEGG Orthology K01784; galE, UDP-glucose 4-epimerase
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0006694steroid biosynthetic process GO:00038543-beta-hydroxy-delta5-steroid dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT4G10960 : UDP-D-glucose/UDP-D-galactose 4-epimerase 5
RAP-DB (Rice) LOC_Os09g15420.1 : NAD dependent epimerase/dehydratase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a046491 , Zm00025a013742 , Zm00025a006148
Brachypodium KQJ98153 , KQJ89839
Barley HORVU5Hr1G055920.6 , HORVU5Hr1G055920.7 , HORVU5Hr1G055920.4 , HORVU5Hr1G055920.2 , HORVU5Hr1G055920.3 , HORVU5Hr1G055920.1 , HORVU5Hr1G055920.8
Wheat TraesCS5A02G183100 , TraesCS5D02G188200 , TraesCS5B02G181300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
2 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
3 Sobic.005G170400 OsFBDUF58 - F-box and DUF domain containing protein, expressed -
4 Sobic.004G358000 CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
5 Sobic.003G218100 - -
6 Sobic.003G290500 profilin domain containing protein, expressed K05759: profilin
7 Sobic.003G304600 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
8 Sobic.005G144000 glycosyltransferase, putative, expressed -
9 Sobic.002G283200 expressed protein -
10 Sobic.007G091400 diacylglycerol kinase catalytic domain family protein, expressed K00901: dgkA, diacylglycerol kinase (ATP)
11 Sobic.003G013900 - -
12 Sobic.006G105100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
13 Sobic.008G176500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
14 Sobic.004G180100 - -
15 Sobic.003G114600 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
16 Sobic.001G279000 OsFBX382 - F-box domain containing protein, expressed -
17 Sobic.001G452500 MA3 domain-containing protein("PubMedID : 26759170,PubMedID : 24597475")@MA3 domain containing protein, expressed -
18 Sobic.001G103100 DNA binding protein, putative, expressed -
19 Sobic.006G026200 gamma-thionin family domain containing protein, expressed -
20 Sobic.010G111000 - -


Gene co-expression network
sample Sobic002G170100 Sobic002G170100 Sobic009G242200 Sobic009G242200 Sobic002G170100--Sobic009G242200 Sobic002G380300 Sobic002G380300 Sobic002G170100--Sobic002G380300 Sobic005G170400 Sobic005G170400 Sobic002G170100--Sobic005G170400 Sobic004G358000 Sobic004G358000 Sobic002G170100--Sobic004G358000 Sobic003G218100 Sobic003G218100 Sobic002G170100--Sobic003G218100 Sobic003G290500 Sobic003G290500 Sobic002G170100--Sobic003G290500 Sobic003G304600 Sobic003G304600 Sobic002G170100--Sobic003G304600 Sobic005G144000 Sobic005G144000 Sobic002G170100--Sobic005G144000 Sobic002G283200 Sobic002G283200 Sobic002G170100--Sobic002G283200 Sobic009G242200--Sobic002G170100 Sobic009G242200--Sobic003G290500 Sobic009G242200--Sobic002G380300 Sobic006G115700 Sobic006G115700 Sobic009G242200--Sobic006G115700 Sobic009G242200--Sobic003G304600 Sobic009G242200--Sobic004G358000 Sobic007G091400 Sobic007G091400 Sobic009G242200--Sobic007G091400 Sobic003G297100 Sobic003G297100 Sobic009G242200--Sobic003G297100 Sobic001G370400 Sobic001G370400 Sobic009G242200--Sobic001G370400 Sobic006G105100 Sobic006G105100 Sobic002G380300--Sobic006G105100 Sobic004G290500 Sobic004G290500 Sobic002G380300--Sobic004G290500 Sobic008G176500 Sobic008G176500 Sobic002G380300--Sobic008G176500 Sobic001G041600 Sobic001G041600 Sobic002G380300--Sobic001G041600 Sobic010G016200 Sobic010G016200 Sobic002G380300--Sobic010G016200 Sobic001G130500 Sobic001G130500 Sobic002G380300--Sobic001G130500 Sobic001G332000 Sobic001G332000 Sobic002G380300--Sobic001G332000 Sobic001G329200 Sobic001G329200 Sobic002G380300--Sobic001G329200 Sobic010G040400 Sobic010G040400 Sobic002G380300--Sobic010G040400 Sobic010G111000 Sobic010G111000 Sobic005G170400--Sobic010G111000 Sobic005G170400--Sobic001G041600 Sobic005G170400--Sobic008G176500 Sobic010G098932 Sobic010G098932 Sobic005G170400--Sobic010G098932 Sobic005G207700 Sobic005G207700 Sobic005G170400--Sobic005G207700 Sobic005G170400--Sobic002G380300 Sobic006G043101 Sobic006G043101 Sobic005G170400--Sobic006G043101 Sobic008G125801 Sobic008G125801 Sobic005G170400--Sobic008G125801 Sobic005G214800 Sobic005G214800 Sobic005G170400--Sobic005G214800 Sobic004G358000--Sobic002G170100 Sobic004G358000--Sobic007G091400 Sobic001G103100 Sobic001G103100 Sobic004G358000--Sobic001G103100 Sobic004G358000--Sobic009G242200 Sobic004G358000--Sobic003G290500 Sobic004G358000--Sobic003G218100 Sobic004G358000--Sobic003G304600 Sobic004G358000--Sobic002G380300 Sobic004G358000--Sobic008G176500 Sobic003G218100--Sobic003G304600 Sobic003G394801 Sobic003G394801 Sobic003G218100--Sobic003G394801 Sobic010G162700 Sobic010G162700 Sobic003G218100--Sobic010G162700 Sobic009G169500 Sobic009G169500 Sobic003G218100--Sobic009G169500 Sobic001G306200 Sobic001G306200 Sobic003G218100--Sobic001G306200 Sobic006G236300 Sobic006G236300 Sobic003G218100--Sobic006G236300 Sobic009G016900 Sobic009G016900 Sobic003G218100--Sobic009G016900 Sobic005G204500 Sobic005G204500 Sobic003G218100--Sobic005G204500 Sobic004G217200 Sobic004G217200 Sobic003G218100--Sobic004G217200 Sobic003G290500--Sobic002G380300 Sobic003G290500--Sobic006G105100 Sobic003G290500--Sobic001G041600 Sobic003G290500--Sobic003G304600 Sobic003G290500--Sobic008G176500 Sobic003G290500--Sobic002G283200 Sobic007G222100 Sobic007G222100 Sobic003G290500--Sobic007G222100 Sobic010G051000 Sobic010G051000 Sobic003G290500--Sobic010G051000 Sobic009G203900 Sobic009G203900 Sobic003G290500--Sobic009G203900 Sobic001G306400 Sobic001G306400 Sobic003G304600--Sobic001G306400 Sobic003G304600--Sobic008G176500 Sobic008G154300 Sobic008G154300 Sobic003G304600--Sobic008G154300 Sobic005G142400 Sobic005G142400 Sobic003G304600--Sobic005G142400 Sobic010G091800 Sobic010G091800 Sobic003G304600--Sobic010G091800 Sobic008G017500 Sobic008G017500 Sobic003G304600--Sobic008G017500 Sobic003G246500 Sobic003G246500 Sobic003G304600--Sobic003G246500 Sobic002G053800 Sobic002G053800 Sobic003G304600--Sobic002G053800 Sobic001G269800 Sobic001G269800 Sobic003G304600--Sobic001G269800 Sobic003G441000 Sobic003G441000 Sobic005G144000--Sobic003G441000 Sobic005G144000--Sobic002G170100 Sobic008G122800 Sobic008G122800 Sobic005G144000--Sobic008G122800 Sobic001G279000 Sobic001G279000 Sobic005G144000--Sobic001G279000 Sobic005G144000--Sobic009G242200 Sobic001G503600 Sobic001G503600 Sobic005G144000--Sobic001G503600 Sobic004G180100 Sobic004G180100 Sobic005G144000--Sobic004G180100 Sobic008G071300 Sobic008G071300 Sobic005G144000--Sobic008G071300 Sobic002G404600 Sobic002G404600 Sobic005G144000--Sobic002G404600 Sobic003G114600 Sobic003G114600 Sobic002G283200--Sobic003G114600 Sobic001G024800 Sobic001G024800 Sobic002G283200--Sobic001G024800 Sobic006G263500 Sobic006G263500 Sobic002G283200--Sobic006G263500 Sobic010G006900 Sobic010G006900 Sobic002G283200--Sobic010G006900 Sobic005G025600 Sobic005G025600 Sobic002G283200--Sobic005G025600 Sobic001G452500 Sobic001G452500 Sobic002G283200--Sobic001G452500 Sobic008G027900 Sobic008G027900 Sobic002G283200--Sobic008G027900 Sobic005G023700 Sobic005G023700 Sobic002G283200--Sobic005G023700 Sobic001G252900 Sobic001G252900 Sobic002G283200--Sobic001G252900
Octagon: transcription factors


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