Gene annotation
Transcriptome id Sobic.004G180100.1
Synonym
Functional annotation -
UniProt A0A194YQG0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G180100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G234500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
2 Sobic.009G086600 expressed protein -
3 Sobic.004G042501 - -
4 Sobic.010G145000 - -
5 Sobic.005G170400 OsFBDUF58 - F-box and DUF domain containing protein, expressed -
6 Sobic.001G183633 - -
7 Sobic.008G122800 Recombinant SbCYP728B35 catalyzed the conversion of 5DS (5-deoxystrigol) to sorgomol in vitro.(PubMedID : 34970291)@cytochrome P450, putative, expressed -
8 Sobic.008G176500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
9 Sobic.010G034400 hydrolase, alpha/beta fold family protein, putative, expressed -
10 Sobic.003G304600 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
11 Sobic.001G333700 ZOS3-10 - C2H2 zinc finger protein, expressed -
12 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
13 Sobic.010G111000 - -
14 Sobic.006G069766 - -
15 Sobic.002G150932 - -
16 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
17 Sobic.001G041600 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
18 Sobic.006G105100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
19 Sobic.005G207700 - -
20 Sobic.003G218100 - -


Gene co-expression network
sample Sobic004G180100 Sobic004G180100 Sobic001G234500 Sobic001G234500 Sobic004G180100--Sobic001G234500 Sobic009G086600 Sobic009G086600 Sobic004G180100--Sobic009G086600 Sobic004G042501 Sobic004G042501 Sobic004G180100--Sobic004G042501 Sobic010G145000 Sobic010G145000 Sobic004G180100--Sobic010G145000 Sobic005G170400 Sobic005G170400 Sobic004G180100--Sobic005G170400 Sobic001G183633 Sobic001G183633 Sobic004G180100--Sobic001G183633 Sobic008G122800 Sobic008G122800 Sobic004G180100--Sobic008G122800 Sobic008G176500 Sobic008G176500 Sobic004G180100--Sobic008G176500 Sobic010G034400 Sobic010G034400 Sobic004G180100--Sobic010G034400 Sobic001G234500--Sobic009G086600 Sobic001G234500--Sobic001G183633 Sobic001G234500--Sobic010G145000 Sobic001G234500--Sobic004G180100 Sobic002G150932 Sobic002G150932 Sobic001G234500--Sobic002G150932 Sobic001G234500--Sobic010G034400 Sobic003G304600 Sobic003G304600 Sobic001G234500--Sobic003G304600 Sobic001G234500--Sobic008G176500 Sobic001G094700 Sobic001G094700 Sobic001G234500--Sobic001G094700 Sobic009G086600--Sobic010G145000 Sobic009G086600--Sobic010G034400 Sobic009G086600--Sobic002G150932 Sobic009G086600--Sobic001G094700 Sobic001G488950 Sobic001G488950 Sobic004G042501--Sobic001G488950 Sobic001G333700 Sobic001G333700 Sobic004G042501--Sobic001G333700 Sobic004G042501--Sobic001G094700 Sobic010G145000--Sobic009G086600 Sobic010G145000--Sobic001G094700 Sobic010G111000 Sobic010G111000 Sobic005G170400--Sobic010G111000 Sobic001G041600 Sobic001G041600 Sobic005G170400--Sobic001G041600 Sobic005G170400--Sobic008G176500 Sobic010G098932 Sobic010G098932 Sobic005G170400--Sobic010G098932 Sobic005G207700 Sobic005G207700 Sobic005G170400--Sobic005G207700 Sobic002G380300 Sobic002G380300 Sobic005G170400--Sobic002G380300 Sobic006G043101 Sobic006G043101 Sobic005G170400--Sobic006G043101 Sobic008G125801 Sobic008G125801 Sobic005G170400--Sobic008G125801 Sobic005G214800 Sobic005G214800 Sobic005G170400--Sobic005G214800 Sobic001G183633--Sobic001G234500 Sobic001G183633--Sobic009G086600 Sobic001G183633--Sobic002G150932 Sobic001G183633--Sobic010G145000 Sobic003G218100 Sobic003G218100 Sobic001G183633--Sobic003G218100 Sobic001G183633--Sobic005G170400 Sobic001G183633--Sobic010G098932 Sobic004G120600 Sobic004G120600 Sobic001G183633--Sobic004G120600 Sobic001G183633--Sobic003G304600 Sobic008G122800--Sobic004G180100 Sobic005G144000 Sobic005G144000 Sobic008G122800--Sobic005G144000 Sobic002G170100 Sobic002G170100 Sobic008G122800--Sobic002G170100 Sobic001G279000 Sobic001G279000 Sobic008G122800--Sobic001G279000 Sobic008G122800--Sobic001G234500 Sobic008G122800--Sobic001G183633 Sobic003G013900 Sobic003G013900 Sobic008G122800--Sobic003G013900 Sobic003G441000 Sobic003G441000 Sobic008G122800--Sobic003G441000 Sobic008G122800--Sobic009G086600 Sobic008G176500--Sobic001G041600 Sobic008G176500--Sobic003G304600 Sobic009G203900 Sobic009G203900 Sobic008G176500--Sobic009G203900 Sobic007G222100 Sobic007G222100 Sobic008G176500--Sobic007G222100 Sobic002G053800 Sobic002G053800 Sobic008G176500--Sobic002G053800 Sobic004G293300 Sobic004G293300 Sobic008G176500--Sobic004G293300 Sobic001G130500 Sobic001G130500 Sobic008G176500--Sobic001G130500 Sobic010G051000 Sobic010G051000 Sobic008G176500--Sobic010G051000 Sobic001G024900 Sobic001G024900 Sobic008G176500--Sobic001G024900 Sobic010G034400--Sobic001G094700
Octagon: transcription factors


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