Gene annotation
Transcriptome id Sobic.001G234500.1
Synonym SbERF4, Sb01g020555, ethylene response factor 4
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt A0A1B6QKL0
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G23230 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os03g05590.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ96899
Barley HORVU4Hr1G077310.1 , HORVU4Hr1G077310.2 , HORVU4Hr1G077310.3 , HORVU4Hr1G077310.4 , HORVU4Hr1G077310.7 , HORVU4Hr1G077310.8 , HORVU4Hr1G080300.1 , HORVU4Hr1G077310.5 , HORVU5Hr1G068450.1
Wheat TraesCS4B02G299500 , TraesCS4B02G299400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G086600 expressed protein -
2 Sobic.001G183633 - -
3 Sobic.010G145000 - -
4 Sobic.004G180100 - -
5 Sobic.002G150932 - -
6 Sobic.010G034400 hydrolase, alpha/beta fold family protein, putative, expressed -
7 Sobic.003G304600 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
8 Sobic.008G176500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
9 Sobic.001G094700 expressed protein -
10 Sobic.001G094700 expressed protein -
11 Sobic.001G094700 expressed protein -
12 Sobic.001G094700 expressed protein -
13 Sobic.001G094700 expressed protein -
14 Sobic.001G094700 expressed protein -
15 Sobic.001G094700 expressed protein -
16 Sobic.001G094700 expressed protein -
17 Sobic.001G094700 expressed protein -
18 Sobic.001G094700 expressed protein -
19 Sobic.001G094700 expressed protein -
20 Sobic.001G094700 expressed protein -


Gene co-expression network
sample Sobic001G234500 Sobic001G234500 Sobic009G086600 Sobic009G086600 Sobic001G234500--Sobic009G086600 Sobic001G183633 Sobic001G183633 Sobic001G234500--Sobic001G183633 Sobic010G145000 Sobic010G145000 Sobic001G234500--Sobic010G145000 Sobic004G180100 Sobic004G180100 Sobic001G234500--Sobic004G180100 Sobic002G150932 Sobic002G150932 Sobic001G234500--Sobic002G150932 Sobic010G034400 Sobic010G034400 Sobic001G234500--Sobic010G034400 Sobic003G304600 Sobic003G304600 Sobic001G234500--Sobic003G304600 Sobic008G176500 Sobic008G176500 Sobic001G234500--Sobic008G176500 Sobic001G094700 Sobic001G094700 Sobic001G234500--Sobic001G094700 Sobic009G086600--Sobic010G145000 Sobic009G086600--Sobic010G034400 Sobic009G086600--Sobic002G150932 Sobic009G086600--Sobic001G094700 Sobic001G183633--Sobic001G234500 Sobic001G183633--Sobic009G086600 Sobic001G183633--Sobic002G150932 Sobic001G183633--Sobic010G145000 Sobic003G218100 Sobic003G218100 Sobic001G183633--Sobic003G218100 Sobic005G170400 Sobic005G170400 Sobic001G183633--Sobic005G170400 Sobic010G098932 Sobic010G098932 Sobic001G183633--Sobic010G098932 Sobic004G120600 Sobic004G120600 Sobic001G183633--Sobic004G120600 Sobic001G183633--Sobic003G304600 Sobic010G145000--Sobic009G086600 Sobic010G145000--Sobic001G094700 Sobic004G180100--Sobic001G234500 Sobic004G180100--Sobic009G086600 Sobic004G042501 Sobic004G042501 Sobic004G180100--Sobic004G042501 Sobic004G180100--Sobic010G145000 Sobic004G180100--Sobic005G170400 Sobic004G180100--Sobic001G183633 Sobic008G122800 Sobic008G122800 Sobic004G180100--Sobic008G122800 Sobic004G180100--Sobic008G176500 Sobic004G180100--Sobic010G034400 Sobic001G248700 Sobic001G248700 Sobic002G150932--Sobic001G248700 Sobic002G150932--Sobic010G145000 Sobic002G150932--Sobic001G094700 Sobic010G034400--Sobic001G094700 Sobic001G306400 Sobic001G306400 Sobic003G304600--Sobic001G306400 Sobic003G304600--Sobic008G176500 Sobic008G154300 Sobic008G154300 Sobic003G304600--Sobic008G154300 Sobic005G142400 Sobic005G142400 Sobic003G304600--Sobic005G142400 Sobic010G091800 Sobic010G091800 Sobic003G304600--Sobic010G091800 Sobic008G017500 Sobic008G017500 Sobic003G304600--Sobic008G017500 Sobic003G246500 Sobic003G246500 Sobic003G304600--Sobic003G246500 Sobic002G053800 Sobic002G053800 Sobic003G304600--Sobic002G053800 Sobic001G269800 Sobic001G269800 Sobic003G304600--Sobic001G269800 Sobic001G041600 Sobic001G041600 Sobic008G176500--Sobic001G041600 Sobic008G176500--Sobic003G304600 Sobic009G203900 Sobic009G203900 Sobic008G176500--Sobic009G203900 Sobic007G222100 Sobic007G222100 Sobic008G176500--Sobic007G222100 Sobic008G176500--Sobic002G053800 Sobic004G293300 Sobic004G293300 Sobic008G176500--Sobic004G293300 Sobic001G130500 Sobic001G130500 Sobic008G176500--Sobic001G130500 Sobic010G051000 Sobic010G051000 Sobic008G176500--Sobic010G051000 Sobic001G024900 Sobic001G024900 Sobic008G176500--Sobic001G024900 Sobic001G094700--Sobic001G094700
Octagon: transcription factors


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