Gene annotation
Transcriptome id Sobic.004G358000.2
Synonym Sb04g038450, ATCPK5, CPK5
Functional annotation CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1Z5RR38
Pfam PF13499 PF07714
Panther DB PTHR24349:SF142 PTHR24349
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0004672; protein kinase activity GO:0006468protein phosphorylation


Orthologs (automatic annotation)
TAIR AT4G35310 : calmodulin-domain protein kinase 5
RAP-DB (Rice) LOC_Os02g58520.1 : CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a028374 , Zm00025a039723 , Zm00025a024833 , Zm00025a025734 , Zm00025a033401 , Zm00025a032358 , Zm00025a047650 , Zm00025a033617 , Zm00025a014340 , Zm00025a016615 , Zm00025a032700 , Zm00025a056829 , Zm00025a013124
Brachypodium PNT69746 , KQK10428 , KQJ91880 , KQK12836 , KQJ89241 , KQK20829 , KQK20828 , KQJ89539 , PNT68518 , PNT73998 , PNT73999 , KQJ91002 , PNT64929 , PNT64928
Barley HORVU3Hr1G079040.5 , HORVU3Hr1G079040.4 , HORVU3Hr1G079040.7 , HORVU3Hr1G079040.6 , HORVU3Hr1G079040.1 , HORVU3Hr1G079040.3 , HORVU3Hr1G079040.2 , HORVU4Hr1G026640.1 , HORVU4Hr1G026640.4 , HORVU4Hr1G026640.5 , HORVU6Hr1G094990.7 , HORVU7Hr1G056060.1 , HORVU7Hr1G056060.2 , HORVU7Hr1G056060.3 , HORVU7Hr1G056060.5 , HORVU6Hr1G094990.6 , HORVU6Hr1G094990.8 , HORVU7Hr1G056060.12 , HORVU7Hr1G056060.10 , HORVU7Hr1G056060.11 , HORVU0Hr1G032220.2 , HORVU0Hr1G032220.1 , HORVU4Hr1G004540.9 , HORVU4Hr1G004540.8 , HORVU4Hr1G004540.3 , HORVU4Hr1G004540.1 , HORVU1Hr1G068240.2 , HORVU1Hr1G068240.1 , HORVU4Hr1G004540.19 , HORVU4Hr1G004540.18 , HORVU4Hr1G004540.13 , HORVU4Hr1G004540.10 , HORVU4Hr1G004540.17 , HORVU4Hr1G004540.16 , HORVU4Hr1G004540.15 , HORVU4Hr1G004540.14 , HORVU2Hr1G096270.8 , HORVU2Hr1G096270.1 , HORVU2Hr1G096270.2 , HORVU2Hr1G096270.3 , HORVU2Hr1G096270.4 , HORVU2Hr1G096270.5 , HORVU2Hr1G096270.6 , HORVU2Hr1G096270.7 , HORVU6Hr1G094990.5 , HORVU6Hr1G094990.4 , HORVU6Hr1G094990.3 , HORVU6Hr1G094990.2 , HORVU6Hr1G094990.1 , HORVU7Hr1G056060.8 , HORVU7Hr1G056060.9 , HORVU7Hr1G056060.4 , HORVU7Hr1G056060.6 , HORVU7Hr1G056060.7 , HORVU4Hr1G004540.20 , HORVU4Hr1G019530.8 , HORVU4Hr1G019530.4 , HORVU4Hr1G019530.6 , HORVU4Hr1G019530.7 , HORVU4Hr1G019530.1 , HORVU4Hr1G019530.2 , HORVU4Hr1G019530.3 , HORVU5Hr1G078430.3 , HORVU5Hr1G078430.2 , HORVU5Hr1G078430.5 , HORVU5Hr1G078430.4 , HORVU5Hr1G044550.1 , HORVU5Hr1G044550.3 , HORVU5Hr1G044550.2
Wheat TraesCS3A02G351300 , TraesCS4A02G283400 , TraesCS2A02G407200 , TraesCS5D02G434500 , TraesCS1A02G424200 , TraesCS4A02G187900 , TraesCS4D02G125500 , TraesCS4D02G027600 , TraesCS4D02G107200 , TraesCS7B02G165200 , TraesCS5D02G305200 , TraesCS5A02G298500 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS5D02G434500 , TraesCS6B02G467300 , TraesCS6D02G404800 , TraesCS4B02G030100 , TraesCS4B02G030100 , TraesCS5B02G428400 , TraesCS5B02G428400 , TraesCS5B02G137600 , TraesCS3D02G345500 , TraesCS5D02G122800 , TraesCS5B02G297700 , TraesCS7A02G267000 , TraesCS6A02G261200 , TraesCS4A02G206200 , TraesCS4A02G206200 , TraesCS5B02G115400 , TraesCS5B02G115400 , TraesCS1A02G309400 , TraesCS1A02G309400 , TraesCS3B02G383800 , TraesCS6D02G242000 , TraesCS6D02G242000 , TraesCS6A02G421000 , TraesCS5A02G426500 , TraesCS4B02G109800 , TraesCS4B02G109800 , TraesCS2D02G404200 , TraesCS2B02G424900 , TraesCS5D02G122800 , TraesCS5D02G122800 , TraesCS5D02G122800 , TraesCS5A02G138300 , TraesCS7D02G267700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
2 Sobic.007G091400 diacylglycerol kinase catalytic domain family protein, expressed K00901: dgkA, diacylglycerol kinase (ATP)
3 Sobic.001G103100 DNA binding protein, putative, expressed -
4 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
5 Sobic.003G290500 profilin domain containing protein, expressed K05759: profilin
6 Sobic.003G218100 - -
7 Sobic.003G304600 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
8 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
9 Sobic.008G176500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
10 Sobic.005G185900 expressed protein -
11 Sobic.010G098932 - -
12 Sobic.006G105100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
13 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
14 Sobic.001G041600 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
15 Sobic.002G150932 - -
16 Sobic.005G002100 protein kinase domain containing protein, expressed -
17 Sobic.004G094400 - -
18 Sobic.001G232600 - -
19 Sobic.001G452500 MA3 domain-containing protein("PubMedID : 26759170,PubMedID : 24597475")@MA3 domain containing protein, expressed -
20 Sobic.004G120600 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase


Gene co-expression network
sample Sobic004G358000 Sobic004G358000 Sobic002G170100 Sobic002G170100 Sobic004G358000--Sobic002G170100 Sobic007G091400 Sobic007G091400 Sobic004G358000--Sobic007G091400 Sobic001G103100 Sobic001G103100 Sobic004G358000--Sobic001G103100 Sobic009G242200 Sobic009G242200 Sobic004G358000--Sobic009G242200 Sobic003G290500 Sobic003G290500 Sobic004G358000--Sobic003G290500 Sobic003G218100 Sobic003G218100 Sobic004G358000--Sobic003G218100 Sobic003G304600 Sobic003G304600 Sobic004G358000--Sobic003G304600 Sobic002G380300 Sobic002G380300 Sobic004G358000--Sobic002G380300 Sobic008G176500 Sobic008G176500 Sobic004G358000--Sobic008G176500 Sobic002G170100--Sobic009G242200 Sobic002G170100--Sobic002G380300 Sobic005G170400 Sobic005G170400 Sobic002G170100--Sobic005G170400 Sobic002G170100--Sobic004G358000 Sobic002G170100--Sobic003G218100 Sobic002G170100--Sobic003G290500 Sobic002G170100--Sobic003G304600 Sobic005G144000 Sobic005G144000 Sobic002G170100--Sobic005G144000 Sobic002G283200 Sobic002G283200 Sobic002G170100--Sobic002G283200 Sobic004G070600 Sobic004G070600 Sobic007G091400--Sobic004G070600 Sobic009G102700 Sobic009G102700 Sobic007G091400--Sobic009G102700 Sobic010G252600 Sobic010G252600 Sobic007G091400--Sobic010G252600 Sobic002G254700 Sobic002G254700 Sobic007G091400--Sobic002G254700 Sobic001G528700 Sobic001G528700 Sobic007G091400--Sobic001G528700 Sobic002G295800 Sobic002G295800 Sobic007G091400--Sobic002G295800 Sobic001G452500 Sobic001G452500 Sobic007G091400--Sobic001G452500 Sobic009G105100 Sobic009G105100 Sobic007G091400--Sobic009G105100 Sobic006G026200 Sobic006G026200 Sobic007G091400--Sobic006G026200 Sobic001G103100--Sobic007G091400 Sobic010G016200 Sobic010G016200 Sobic001G103100--Sobic010G016200 Sobic001G103100--Sobic009G105100 Sobic005G145400 Sobic005G145400 Sobic001G103100--Sobic005G145400 Sobic004G099200 Sobic004G099200 Sobic001G103100--Sobic004G099200 Sobic010G276100 Sobic010G276100 Sobic001G103100--Sobic010G276100 Sobic009G175400 Sobic009G175400 Sobic001G103100--Sobic009G175400 Sobic004G071900 Sobic004G071900 Sobic001G103100--Sobic004G071900 Sobic001G103100--Sobic010G252600 Sobic009G242200--Sobic002G170100 Sobic009G242200--Sobic003G290500 Sobic009G242200--Sobic002G380300 Sobic006G115700 Sobic006G115700 Sobic009G242200--Sobic006G115700 Sobic009G242200--Sobic003G304600 Sobic009G242200--Sobic004G358000 Sobic009G242200--Sobic007G091400 Sobic003G297100 Sobic003G297100 Sobic009G242200--Sobic003G297100 Sobic001G370400 Sobic001G370400 Sobic009G242200--Sobic001G370400 Sobic003G290500--Sobic002G380300 Sobic006G105100 Sobic006G105100 Sobic003G290500--Sobic006G105100 Sobic001G041600 Sobic001G041600 Sobic003G290500--Sobic001G041600 Sobic003G290500--Sobic003G304600 Sobic003G290500--Sobic008G176500 Sobic003G290500--Sobic002G283200 Sobic007G222100 Sobic007G222100 Sobic003G290500--Sobic007G222100 Sobic010G051000 Sobic010G051000 Sobic003G290500--Sobic010G051000 Sobic009G203900 Sobic009G203900 Sobic003G290500--Sobic009G203900 Sobic003G218100--Sobic003G304600 Sobic003G394801 Sobic003G394801 Sobic003G218100--Sobic003G394801 Sobic010G162700 Sobic010G162700 Sobic003G218100--Sobic010G162700 Sobic009G169500 Sobic009G169500 Sobic003G218100--Sobic009G169500 Sobic001G306200 Sobic001G306200 Sobic003G218100--Sobic001G306200 Sobic006G236300 Sobic006G236300 Sobic003G218100--Sobic006G236300 Sobic009G016900 Sobic009G016900 Sobic003G218100--Sobic009G016900 Sobic005G204500 Sobic005G204500 Sobic003G218100--Sobic005G204500 Sobic004G217200 Sobic004G217200 Sobic003G218100--Sobic004G217200 Sobic001G306400 Sobic001G306400 Sobic003G304600--Sobic001G306400 Sobic003G304600--Sobic008G176500 Sobic008G154300 Sobic008G154300 Sobic003G304600--Sobic008G154300 Sobic005G142400 Sobic005G142400 Sobic003G304600--Sobic005G142400 Sobic010G091800 Sobic010G091800 Sobic003G304600--Sobic010G091800 Sobic008G017500 Sobic008G017500 Sobic003G304600--Sobic008G017500 Sobic003G246500 Sobic003G246500 Sobic003G304600--Sobic003G246500 Sobic002G053800 Sobic002G053800 Sobic003G304600--Sobic002G053800 Sobic001G269800 Sobic001G269800 Sobic003G304600--Sobic001G269800 Sobic002G380300--Sobic006G105100 Sobic004G290500 Sobic004G290500 Sobic002G380300--Sobic004G290500 Sobic002G380300--Sobic008G176500 Sobic002G380300--Sobic001G041600 Sobic002G380300--Sobic010G016200 Sobic001G130500 Sobic001G130500 Sobic002G380300--Sobic001G130500 Sobic001G332000 Sobic001G332000 Sobic002G380300--Sobic001G332000 Sobic001G329200 Sobic001G329200 Sobic002G380300--Sobic001G329200 Sobic010G040400 Sobic010G040400 Sobic002G380300--Sobic010G040400 Sobic008G176500--Sobic001G041600 Sobic008G176500--Sobic003G304600 Sobic008G176500--Sobic009G203900 Sobic008G176500--Sobic007G222100 Sobic008G176500--Sobic002G053800 Sobic004G293300 Sobic004G293300 Sobic008G176500--Sobic004G293300 Sobic008G176500--Sobic001G130500 Sobic008G176500--Sobic010G051000 Sobic001G024900 Sobic001G024900 Sobic008G176500--Sobic001G024900
Octagon: transcription factors


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