Gene annotation
Transcriptome id Sobic.001G279000.1
Synonym Sb01g027450
Functional annotation OsFBX382 - F-box domain containing protein, expressed
UniProt A0A1B6QME8
Pfam PF12937
Panther DB PTHR32133 PTHR32133:SF154
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g17940.1 : OsFBX382 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium PNT68663
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G013900 - -
2 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
3 Sobic.008G176500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AGC_AGC_other_GWLd.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.003G019450 - -
5 Sobic.007G091400 diacylglycerol kinase catalytic domain family protein, expressed K00901: dgkA, diacylglycerol kinase (ATP)
6 Sobic.006G236400 glutaredoxin, putative, expressed -
7 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
8 Sobic.010G016200 expressed protein -
9 Sobic.003G304600 alpha-1,4-glucan-protein synthase, putative, expressed K13379: RGP, reversibly glycosylated polypeptide / UDP-arabinopyranose mutase
10 Sobic.005G170400 OsFBDUF58 - F-box and DUF domain containing protein, expressed -
11 Sobic.003G218100 - -
12 Sobic.003G290500 profilin domain containing protein, expressed K05759: profilin
13 Sobic.004G094400 - -
14 Sobic.002G404600 expressed protein -
15 Sobic.001G103100 DNA binding protein, putative, expressed -
16 Sobic.006G105100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
17 Sobic.001G041600 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
18 Sobic.009G207700 cell cycle control protein, putative, expressed -
19 Sobic.004G290500 actin-depolymerizing factor, putative, expressed K05765: cofilin
20 Sobic.004G120600 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase


Gene co-expression network
sample Sobic001G279000 Sobic001G279000 Sobic003G013900 Sobic003G013900 Sobic001G279000--Sobic003G013900 Sobic002G380300 Sobic002G380300 Sobic001G279000--Sobic002G380300 Sobic008G176500 Sobic008G176500 Sobic001G279000--Sobic008G176500 Sobic003G019450 Sobic003G019450 Sobic001G279000--Sobic003G019450 Sobic007G091400 Sobic007G091400 Sobic001G279000--Sobic007G091400 Sobic006G236400 Sobic006G236400 Sobic001G279000--Sobic006G236400 Sobic001G370400 Sobic001G370400 Sobic001G279000--Sobic001G370400 Sobic010G016200 Sobic010G016200 Sobic001G279000--Sobic010G016200 Sobic003G304600 Sobic003G304600 Sobic001G279000--Sobic003G304600 Sobic006G095700 Sobic006G095700 Sobic003G013900--Sobic006G095700 Sobic010G187700 Sobic010G187700 Sobic003G013900--Sobic010G187700 Sobic006G071096 Sobic006G071096 Sobic003G013900--Sobic006G071096 Sobic009G177300 Sobic009G177300 Sobic003G013900--Sobic009G177300 Sobic009G087200 Sobic009G087200 Sobic003G013900--Sobic009G087200 Sobic008G124301 Sobic008G124301 Sobic003G013900--Sobic008G124301 Sobic003G013900--Sobic007G091400 Sobic002G066100 Sobic002G066100 Sobic003G013900--Sobic002G066100 Sobic001G473700 Sobic001G473700 Sobic003G013900--Sobic001G473700 Sobic006G105100 Sobic006G105100 Sobic002G380300--Sobic006G105100 Sobic004G290500 Sobic004G290500 Sobic002G380300--Sobic004G290500 Sobic002G380300--Sobic008G176500 Sobic001G041600 Sobic001G041600 Sobic002G380300--Sobic001G041600 Sobic002G380300--Sobic010G016200 Sobic001G130500 Sobic001G130500 Sobic002G380300--Sobic001G130500 Sobic001G332000 Sobic001G332000 Sobic002G380300--Sobic001G332000 Sobic001G329200 Sobic001G329200 Sobic002G380300--Sobic001G329200 Sobic010G040400 Sobic010G040400 Sobic002G380300--Sobic010G040400 Sobic008G176500--Sobic001G041600 Sobic008G176500--Sobic003G304600 Sobic009G203900 Sobic009G203900 Sobic008G176500--Sobic009G203900 Sobic007G222100 Sobic007G222100 Sobic008G176500--Sobic007G222100 Sobic002G053800 Sobic002G053800 Sobic008G176500--Sobic002G053800 Sobic004G293300 Sobic004G293300 Sobic008G176500--Sobic004G293300 Sobic008G176500--Sobic001G130500 Sobic010G051000 Sobic010G051000 Sobic008G176500--Sobic010G051000 Sobic001G024900 Sobic001G024900 Sobic008G176500--Sobic001G024900 Sobic006G020400 Sobic006G020400 Sobic003G019450--Sobic006G020400 Sobic003G019450--Sobic008G176500 Sobic008G125801 Sobic008G125801 Sobic003G019450--Sobic008G125801 Sobic006G074150 Sobic006G074150 Sobic003G019450--Sobic006G074150 Sobic003G019450--Sobic001G041600 Sobic002G015900 Sobic002G015900 Sobic003G019450--Sobic002G015900 Sobic001G337100 Sobic001G337100 Sobic003G019450--Sobic001G337100 Sobic004G094400 Sobic004G094400 Sobic003G019450--Sobic004G094400 Sobic010G215000 Sobic010G215000 Sobic003G019450--Sobic010G215000 Sobic004G070600 Sobic004G070600 Sobic007G091400--Sobic004G070600 Sobic009G102700 Sobic009G102700 Sobic007G091400--Sobic009G102700 Sobic010G252600 Sobic010G252600 Sobic007G091400--Sobic010G252600 Sobic002G254700 Sobic002G254700 Sobic007G091400--Sobic002G254700 Sobic001G528700 Sobic001G528700 Sobic007G091400--Sobic001G528700 Sobic002G295800 Sobic002G295800 Sobic007G091400--Sobic002G295800 Sobic001G452500 Sobic001G452500 Sobic007G091400--Sobic001G452500 Sobic009G105100 Sobic009G105100 Sobic007G091400--Sobic009G105100 Sobic006G026200 Sobic006G026200 Sobic007G091400--Sobic006G026200 Sobic007G042800 Sobic007G042800 Sobic006G236400--Sobic007G042800 Sobic009G207700 Sobic009G207700 Sobic006G236400--Sobic009G207700 Sobic010G177200 Sobic010G177200 Sobic006G236400--Sobic010G177200 Sobic006G236400--Sobic006G074150 Sobic004G255900 Sobic004G255900 Sobic006G236400--Sobic004G255900 Sobic005G191300 Sobic005G191300 Sobic006G236400--Sobic005G191300 Sobic008G043300 Sobic008G043300 Sobic006G236400--Sobic008G043300 Sobic001G092500 Sobic001G092500 Sobic006G236400--Sobic001G092500 Sobic004G134000 Sobic004G134000 Sobic006G236400--Sobic004G134000 Sobic009G061601 Sobic009G061601 Sobic001G370400--Sobic009G061601 Sobic003G297100 Sobic003G297100 Sobic001G370400--Sobic003G297100 Sobic001G063300 Sobic001G063300 Sobic001G370400--Sobic001G063300 Sobic006G205400 Sobic006G205400 Sobic001G370400--Sobic006G205400 Sobic007G131000 Sobic007G131000 Sobic001G370400--Sobic007G131000 Sobic003G151400 Sobic003G151400 Sobic001G370400--Sobic003G151400 Sobic007G215200 Sobic007G215200 Sobic001G370400--Sobic007G215200 Sobic001G370400--Sobic002G015900 Sobic001G294500 Sobic001G294500 Sobic001G370400--Sobic001G294500 Sobic008G043200 Sobic008G043200 Sobic010G016200--Sobic008G043200 Sobic010G016200--Sobic010G040400 Sobic010G016200--Sobic001G092500 Sobic009G175400 Sobic009G175400 Sobic010G016200--Sobic009G175400 Sobic010G016200--Sobic007G215200 Sobic010G016200--Sobic001G332000 Sobic010G207800 Sobic010G207800 Sobic010G016200--Sobic010G207800 Sobic005G145400 Sobic005G145400 Sobic010G016200--Sobic005G145400 Sobic001G089400 Sobic001G089400 Sobic010G016200--Sobic001G089400 Sobic001G306400 Sobic001G306400 Sobic003G304600--Sobic001G306400 Sobic003G304600--Sobic008G176500 Sobic008G154300 Sobic008G154300 Sobic003G304600--Sobic008G154300 Sobic005G142400 Sobic005G142400 Sobic003G304600--Sobic005G142400 Sobic010G091800 Sobic010G091800 Sobic003G304600--Sobic010G091800 Sobic008G017500 Sobic008G017500 Sobic003G304600--Sobic008G017500 Sobic003G246500 Sobic003G246500 Sobic003G304600--Sobic003G246500 Sobic003G304600--Sobic002G053800 Sobic001G269800 Sobic001G269800 Sobic003G304600--Sobic001G269800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.