Gene annotation
Transcriptome id Sobic.010G052900.3,Sobic.010G052900.1,Sobic.010G052900.2
Synonym
Functional annotation expressed protein
UniProt A0A1W0VRI5 , A0A194YHE8
Pfam -
Panther DB PTHR31205 PTHR31205:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g06710.1,LOC_Os06g06670.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G197900 expressed protein -
2 Sobic.006G171600 ZOS4-10 - C2H2 zinc finger protein, expressed -
3 Sobic.004G062200 expressed protein -
4 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
5 Sobic.004G154100 OsFBX346 - F-box domain containing protein, expressed -
6 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G257001 - K13947: auxin efflux carrier family protein
8 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
9 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
10 Sobic.003G110932 - -
11 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
12 Sobic.007G138000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
13 Sobic.001G286900 - -
14 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
15 Sobic.001G357400 emp24/gp25L/p24 family protein, putative, expressed -
16 Sobic.006G115700 WRKY35, expressed K18835: WRKY transcription factor 2
17 Sobic.002G266500 - -
18 Sobic.004G042501 - -
19 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
20 Sobic.002G106600 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic010G052900 Sobic010G052900 Sobic006G197900 Sobic006G197900 Sobic010G052900--Sobic006G197900 Sobic006G171600 Sobic006G171600 Sobic010G052900--Sobic006G171600 Sobic004G062200 Sobic004G062200 Sobic010G052900--Sobic004G062200 Sobic001G112600 Sobic001G112600 Sobic010G052900--Sobic001G112600 Sobic004G154100 Sobic004G154100 Sobic010G052900--Sobic004G154100 Sobic006G267100 Sobic006G267100 Sobic010G052900--Sobic006G267100 Sobic002G257001 Sobic002G257001 Sobic010G052900--Sobic002G257001 Sobic001G414650 Sobic001G414650 Sobic010G052900--Sobic001G414650 Sobic008G071300 Sobic008G071300 Sobic010G052900--Sobic008G071300 Sobic007G081701 Sobic007G081701 Sobic006G197900--Sobic007G081701 Sobic002G223650 Sobic002G223650 Sobic006G197900--Sobic002G223650 Sobic006G276801 Sobic006G276801 Sobic006G197900--Sobic006G276801 Sobic009G177750 Sobic009G177750 Sobic006G197900--Sobic009G177750 Sobic002G266500 Sobic002G266500 Sobic006G197900--Sobic002G266500 Sobic004G075250 Sobic004G075250 Sobic006G197900--Sobic004G075250 Sobic003G250160 Sobic003G250160 Sobic006G197900--Sobic003G250160 Sobic004G258000 Sobic004G258000 Sobic006G197900--Sobic004G258000 Sobic001G467400 Sobic001G467400 Sobic006G197900--Sobic001G467400 Sobic006G115700 Sobic006G115700 Sobic006G171600--Sobic006G115700 Sobic010G142650 Sobic010G142650 Sobic006G171600--Sobic010G142650 Sobic009G242200 Sobic009G242200 Sobic006G171600--Sobic009G242200 Sobic004G290600 Sobic004G290600 Sobic006G171600--Sobic004G290600 Sobic006G204500 Sobic006G204500 Sobic006G171600--Sobic006G204500 Sobic010G003200 Sobic010G003200 Sobic006G171600--Sobic010G003200 Sobic003G297100 Sobic003G297100 Sobic006G171600--Sobic003G297100 Sobic002G340600 Sobic002G340600 Sobic006G171600--Sobic002G340600 Sobic002G364700 Sobic002G364700 Sobic006G171600--Sobic002G364700 Sobic004G062200--Sobic006G171600 Sobic004G279200 Sobic004G279200 Sobic004G062200--Sobic004G279200 Sobic001G072000 Sobic001G072000 Sobic004G062200--Sobic001G072000 Sobic004G062200--Sobic001G112600 Sobic006G070564 Sobic006G070564 Sobic004G062200--Sobic006G070564 Sobic004G062200--Sobic010G052900 Sobic005G050400 Sobic005G050400 Sobic004G062200--Sobic005G050400 Sobic004G062200--Sobic006G115700 Sobic007G063800 Sobic007G063800 Sobic004G062200--Sobic007G063800 Sobic001G112600--Sobic005G050400 Sobic001G112600--Sobic009G242200 Sobic003G441000 Sobic003G441000 Sobic001G112600--Sobic003G441000 Sobic002G170100 Sobic002G170100 Sobic001G112600--Sobic002G170100 Sobic001G112600--Sobic001G414650 Sobic003G244400 Sobic003G244400 Sobic001G112600--Sobic003G244400 Sobic008G055200 Sobic008G055200 Sobic001G112600--Sobic008G055200 Sobic004G358000 Sobic004G358000 Sobic001G112600--Sobic004G358000 Sobic005G144000 Sobic005G144000 Sobic001G112600--Sobic005G144000 Sobic004G154100--Sobic002G170100 Sobic001G279000 Sobic001G279000 Sobic004G154100--Sobic001G279000 Sobic004G154100--Sobic005G144000 Sobic008G122800 Sobic008G122800 Sobic004G154100--Sobic008G122800 Sobic002G381500 Sobic002G381500 Sobic004G154100--Sobic002G381500 Sobic004G154100--Sobic009G242200 Sobic001G039100 Sobic001G039100 Sobic004G154100--Sobic001G039100 Sobic002G283200 Sobic002G283200 Sobic004G154100--Sobic002G283200 Sobic004G154100--Sobic006G267100 Sobic006G267100--Sobic008G071300 Sobic006G267100--Sobic001G414650 Sobic006G267100--Sobic002G340600 Sobic003G114600 Sobic003G114600 Sobic006G267100--Sobic003G114600 Sobic006G267100--Sobic002G283200 Sobic006G105100 Sobic006G105100 Sobic006G267100--Sobic006G105100 Sobic004G042501 Sobic004G042501 Sobic006G267100--Sobic004G042501 Sobic002G380300 Sobic002G380300 Sobic006G267100--Sobic002G380300 Sobic003G290500 Sobic003G290500 Sobic006G267100--Sobic003G290500 Sobic001G333700 Sobic001G333700 Sobic002G257001--Sobic001G333700 Sobic002G106600 Sobic002G106600 Sobic002G257001--Sobic002G106600 Sobic007G070900 Sobic007G070900 Sobic002G257001--Sobic007G070900 Sobic005G135100 Sobic005G135100 Sobic002G257001--Sobic005G135100 Sobic002G257001--Sobic004G042501 Sobic005G049850 Sobic005G049850 Sobic002G257001--Sobic005G049850 Sobic001G337100 Sobic001G337100 Sobic002G257001--Sobic001G337100 Sobic007G112500 Sobic007G112500 Sobic002G257001--Sobic007G112500 Sobic005G207700 Sobic005G207700 Sobic002G257001--Sobic005G207700 Sobic001G357400 Sobic001G357400 Sobic001G414650--Sobic001G357400 Sobic002G404600 Sobic002G404600 Sobic001G414650--Sobic002G404600 Sobic001G414650--Sobic008G055200 Sobic001G414650--Sobic002G381500 Sobic001G414650--Sobic007G070900 Sobic001G414650--Sobic006G105100 Sobic004G054900 Sobic004G054900 Sobic001G414650--Sobic004G054900 Sobic009G110600 Sobic009G110600 Sobic001G414650--Sobic009G110600 Sobic001G414650--Sobic001G337100 Sobic008G071300--Sobic006G267100 Sobic008G071300--Sobic002G170100 Sobic008G071300--Sobic003G114600 Sobic008G071300--Sobic002G283200 Sobic008G071300--Sobic003G290500 Sobic008G071300--Sobic001G039100 Sobic008G071300--Sobic002G340600 Sobic008G071300--Sobic006G105100 Sobic001G503600 Sobic001G503600 Sobic008G071300--Sobic001G503600
Octagon: transcription factors


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