Gene annotation
Transcriptome id Sobic.004G154100.1,Sobic.004G154100.2
Synonym
Functional annotation OsFBX346 - F-box domain containing protein, expressed
UniProt A0A194YPZ6 , A0A1Z5RN23
Pfam -
Panther DB PTHR32212 PTHR32212:SF88
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g03690.1 : OsFBX346 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
2 Sobic.001G279000 OsFBX382 - F-box domain containing protein, expressed -
3 Sobic.005G144000 glycosyltransferase, putative, expressed -
4 Sobic.008G122800 Recombinant SbCYP728B35 catalyzed the conversion of 5DS (5-deoxystrigol) to sorgomol in vitro.(PubMedID : 34970291)@cytochrome P450, putative, expressed -
5 Sobic.002G381500 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
6 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
7 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
8 Sobic.002G283200 expressed protein -
9 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.004G318900 stage II sporulation protein E, putative, expressed -
11 Sobic.004G180100 - -
12 Sobic.003G114600 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
13 Sobic.003G290500 profilin domain containing protein, expressed K05759: profilin
14 Sobic.002G404600 expressed protein -
15 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
16 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
17 Sobic.005G170400 OsFBDUF58 - F-box and DUF domain containing protein, expressed -
18 Sobic.003G013900 - -
19 Sobic.010G187700 GRAM and C2 domains containing protein, putative, expressed -
20 Sobic.001G053500 expressed protein -


Gene co-expression network
sample Sobic004G154100 Sobic004G154100 Sobic002G170100 Sobic002G170100 Sobic004G154100--Sobic002G170100 Sobic001G279000 Sobic001G279000 Sobic004G154100--Sobic001G279000 Sobic005G144000 Sobic005G144000 Sobic004G154100--Sobic005G144000 Sobic008G122800 Sobic008G122800 Sobic004G154100--Sobic008G122800 Sobic002G381500 Sobic002G381500 Sobic004G154100--Sobic002G381500 Sobic009G242200 Sobic009G242200 Sobic004G154100--Sobic009G242200 Sobic001G039100 Sobic001G039100 Sobic004G154100--Sobic001G039100 Sobic002G283200 Sobic002G283200 Sobic004G154100--Sobic002G283200 Sobic006G267100 Sobic006G267100 Sobic004G154100--Sobic006G267100 Sobic002G170100--Sobic009G242200 Sobic002G380300 Sobic002G380300 Sobic002G170100--Sobic002G380300 Sobic005G170400 Sobic005G170400 Sobic002G170100--Sobic005G170400 Sobic004G358000 Sobic004G358000 Sobic002G170100--Sobic004G358000 Sobic003G218100 Sobic003G218100 Sobic002G170100--Sobic003G218100 Sobic003G290500 Sobic003G290500 Sobic002G170100--Sobic003G290500 Sobic003G304600 Sobic003G304600 Sobic002G170100--Sobic003G304600 Sobic002G170100--Sobic005G144000 Sobic002G170100--Sobic002G283200 Sobic003G013900 Sobic003G013900 Sobic001G279000--Sobic003G013900 Sobic001G279000--Sobic002G380300 Sobic008G176500 Sobic008G176500 Sobic001G279000--Sobic008G176500 Sobic003G019450 Sobic003G019450 Sobic001G279000--Sobic003G019450 Sobic007G091400 Sobic007G091400 Sobic001G279000--Sobic007G091400 Sobic006G236400 Sobic006G236400 Sobic001G279000--Sobic006G236400 Sobic001G370400 Sobic001G370400 Sobic001G279000--Sobic001G370400 Sobic010G016200 Sobic010G016200 Sobic001G279000--Sobic010G016200 Sobic001G279000--Sobic003G304600 Sobic003G441000 Sobic003G441000 Sobic005G144000--Sobic003G441000 Sobic005G144000--Sobic002G170100 Sobic005G144000--Sobic008G122800 Sobic005G144000--Sobic001G279000 Sobic005G144000--Sobic009G242200 Sobic001G503600 Sobic001G503600 Sobic005G144000--Sobic001G503600 Sobic004G180100 Sobic004G180100 Sobic005G144000--Sobic004G180100 Sobic008G071300 Sobic008G071300 Sobic005G144000--Sobic008G071300 Sobic002G404600 Sobic002G404600 Sobic005G144000--Sobic002G404600 Sobic008G122800--Sobic004G180100 Sobic008G122800--Sobic005G144000 Sobic008G122800--Sobic002G170100 Sobic008G122800--Sobic001G279000 Sobic001G234500 Sobic001G234500 Sobic008G122800--Sobic001G234500 Sobic001G183633 Sobic001G183633 Sobic008G122800--Sobic001G183633 Sobic008G122800--Sobic003G013900 Sobic008G122800--Sobic003G441000 Sobic009G086600 Sobic009G086600 Sobic008G122800--Sobic009G086600 Sobic002G381500--Sobic002G404600 Sobic007G204200 Sobic007G204200 Sobic002G381500--Sobic007G204200 Sobic007G197000 Sobic007G197000 Sobic002G381500--Sobic007G197000 Sobic005G037700 Sobic005G037700 Sobic002G381500--Sobic005G037700 Sobic009G110600 Sobic009G110600 Sobic002G381500--Sobic009G110600 Sobic010G121700 Sobic010G121700 Sobic002G381500--Sobic010G121700 Sobic004G192600 Sobic004G192600 Sobic002G381500--Sobic004G192600 Sobic003G004000 Sobic003G004000 Sobic002G381500--Sobic003G004000 Sobic001G089400 Sobic001G089400 Sobic002G381500--Sobic001G089400 Sobic009G242200--Sobic002G170100 Sobic009G242200--Sobic003G290500 Sobic009G242200--Sobic002G380300 Sobic006G115700 Sobic006G115700 Sobic009G242200--Sobic006G115700 Sobic009G242200--Sobic003G304600 Sobic009G242200--Sobic004G358000 Sobic009G242200--Sobic007G091400 Sobic003G297100 Sobic003G297100 Sobic009G242200--Sobic003G297100 Sobic009G242200--Sobic001G370400 Sobic001G039100--Sobic002G404600 Sobic007G196700 Sobic007G196700 Sobic001G039100--Sobic007G196700 Sobic001G039100--Sobic002G381500 Sobic002G308900 Sobic002G308900 Sobic001G039100--Sobic002G308900 Sobic001G039100--Sobic009G110600 Sobic006G105100 Sobic006G105100 Sobic001G039100--Sobic006G105100 Sobic001G039100--Sobic002G380300 Sobic001G414650 Sobic001G414650 Sobic001G039100--Sobic001G414650 Sobic004G290500 Sobic004G290500 Sobic001G039100--Sobic004G290500 Sobic003G114600 Sobic003G114600 Sobic002G283200--Sobic003G114600 Sobic001G024800 Sobic001G024800 Sobic002G283200--Sobic001G024800 Sobic006G263500 Sobic006G263500 Sobic002G283200--Sobic006G263500 Sobic010G006900 Sobic010G006900 Sobic002G283200--Sobic010G006900 Sobic005G025600 Sobic005G025600 Sobic002G283200--Sobic005G025600 Sobic001G452500 Sobic001G452500 Sobic002G283200--Sobic001G452500 Sobic008G027900 Sobic008G027900 Sobic002G283200--Sobic008G027900 Sobic005G023700 Sobic005G023700 Sobic002G283200--Sobic005G023700 Sobic001G252900 Sobic001G252900 Sobic002G283200--Sobic001G252900 Sobic006G267100--Sobic008G071300 Sobic006G267100--Sobic001G414650 Sobic002G340600 Sobic002G340600 Sobic006G267100--Sobic002G340600 Sobic006G267100--Sobic003G114600 Sobic006G267100--Sobic002G283200 Sobic006G267100--Sobic006G105100 Sobic004G042501 Sobic004G042501 Sobic006G267100--Sobic004G042501 Sobic006G267100--Sobic002G380300 Sobic006G267100--Sobic003G290500
Octagon: transcription factors


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