Gene annotation
Transcriptome id Sobic.001G053500.1
Synonym Sb01g004910
Functional annotation expressed protein
UniProt C5WX36
Pfam -
Panther DB PTHR33086 PTHR33086:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g54190.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G110700 OsFBL58 - F-box domain and LRR containing protein, expressed -
2 Sobic.003G245300 3-5 exonuclease domain-containing protein, putative, expressed -
3 Sobic.001G192300 expressed protein -
4 Sobic.007G122600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
5 Sobic.005G006100 hypothetical protein -
6 Sobic.009G060000 WD40-like domain containing protein, putative, expressed -
7 Sobic.010G216100 leaf senescence related protein, putative, expressed -
8 Sobic.002G049700 potassium channel AKT1, putative, expressed -
9 Sobic.010G207800 E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
10 Sobic.004G308800 expressed protein -
11 Sobic.002G194201 - -
12 Sobic.010G240300 Os12bglu38 - beta-glucosidase/beta-mannosidase/exoglucanase homologue, expressed K05350: beta-glucosidase
13 Sobic.005G006400 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
14 Sobic.003G007650 - -
15 Sobic.007G134501 - -
16 Sobic.007G035200 - -
17 Sobic.007G014000 OsFBX142 - F-box domain containing protein, expressed -
18 Sobic.008G086500 - -
19 Sobic.010G090200 OsMADS63 - MADS-box family gene with MIKC , type-box, expressed -
20 Sobic.001G167300 - -


Gene co-expression network
sample Sobic001G053500 Sobic001G053500 Sobic009G110700 Sobic009G110700 Sobic001G053500--Sobic009G110700 Sobic003G245300 Sobic003G245300 Sobic001G053500--Sobic003G245300 Sobic001G192300 Sobic001G192300 Sobic001G053500--Sobic001G192300 Sobic007G122600 Sobic007G122600 Sobic001G053500--Sobic007G122600 Sobic005G006100 Sobic005G006100 Sobic001G053500--Sobic005G006100 Sobic009G060000 Sobic009G060000 Sobic001G053500--Sobic009G060000 Sobic010G216100 Sobic010G216100 Sobic001G053500--Sobic010G216100 Sobic002G049700 Sobic002G049700 Sobic001G053500--Sobic002G049700 Sobic010G207800 Sobic010G207800 Sobic001G053500--Sobic010G207800 Sobic009G110700--Sobic003G245300 Sobic009G110700--Sobic007G122600 Sobic008G024200 Sobic008G024200 Sobic009G110700--Sobic008G024200 Sobic009G047100 Sobic009G047100 Sobic009G110700--Sobic009G047100 Sobic009G110700--Sobic005G006100 Sobic001G167300 Sobic001G167300 Sobic009G110700--Sobic001G167300 Sobic009G110700--Sobic010G216100 Sobic009G110700--Sobic010G207800 Sobic009G110700--Sobic001G192300 Sobic003G245300--Sobic007G122600 Sobic002G194201 Sobic002G194201 Sobic003G245300--Sobic002G194201 Sobic007G134501 Sobic007G134501 Sobic003G245300--Sobic007G134501 Sobic005G040100 Sobic005G040100 Sobic003G245300--Sobic005G040100 Sobic003G007650 Sobic003G007650 Sobic003G245300--Sobic003G007650 Sobic003G245300--Sobic005G006100 Sobic007G035200 Sobic007G035200 Sobic003G245300--Sobic007G035200 Sobic005G006400 Sobic005G006400 Sobic003G245300--Sobic005G006400 Sobic008G086500 Sobic008G086500 Sobic003G245300--Sobic008G086500 Sobic001G192300--Sobic007G122600 Sobic001G192300--Sobic005G006100 Sobic001G192300--Sobic002G194201 Sobic001G192300--Sobic007G134501 Sobic001G192300--Sobic005G040100 Sobic001G192300--Sobic003G007650 Sobic001G192300--Sobic003G245300 Sobic001G192300--Sobic005G006400 Sobic001G192300--Sobic007G035200 Sobic007G122600--Sobic005G006100 Sobic007G122600--Sobic002G194201 Sobic007G122600--Sobic007G134501 Sobic007G122600--Sobic005G040100 Sobic007G122600--Sobic003G007650 Sobic007G122600--Sobic003G245300 Sobic007G122600--Sobic005G006400 Sobic010G240300 Sobic010G240300 Sobic007G122600--Sobic010G240300 Sobic007G122600--Sobic007G035200 Sobic005G006100--Sobic007G122600 Sobic005G006100--Sobic007G134501 Sobic005G006100--Sobic002G194201 Sobic005G006100--Sobic003G007650 Sobic005G006100--Sobic010G240300 Sobic005G006100--Sobic005G006400 Sobic005G006100--Sobic007G035200 Sobic005G006100--Sobic005G040100 Sobic005G006100--Sobic010G207800 Sobic009G158300 Sobic009G158300 Sobic009G060000--Sobic009G158300 Sobic009G060000--Sobic002G049700 Sobic001G409000 Sobic001G409000 Sobic009G060000--Sobic001G409000 Sobic007G001800 Sobic007G001800 Sobic009G060000--Sobic007G001800 Sobic003G445600 Sobic003G445600 Sobic009G060000--Sobic003G445600 Sobic003G160600 Sobic003G160600 Sobic009G060000--Sobic003G160600 Sobic006G164800 Sobic006G164800 Sobic009G060000--Sobic006G164800 Sobic007G145500 Sobic007G145500 Sobic009G060000--Sobic007G145500 Sobic009G016900 Sobic009G016900 Sobic009G060000--Sobic009G016900 Sobic007G014000 Sobic007G014000 Sobic010G216100--Sobic007G014000 Sobic010G216100--Sobic010G240300 Sobic010G090200 Sobic010G090200 Sobic010G216100--Sobic010G090200 Sobic001G261416 Sobic001G261416 Sobic010G216100--Sobic001G261416 Sobic010G216100--Sobic008G086500 Sobic010G216100--Sobic005G006400 Sobic002G194300 Sobic002G194300 Sobic010G216100--Sobic002G194300 Sobic010G215000 Sobic010G215000 Sobic010G216100--Sobic010G215000 Sobic010G216100--Sobic010G207800 Sobic001G392650 Sobic001G392650 Sobic002G049700--Sobic001G392650 Sobic008G134600 Sobic008G134600 Sobic002G049700--Sobic008G134600 Sobic002G049700--Sobic009G060000 Sobic002G049700--Sobic009G158300 Sobic001G092500 Sobic001G092500 Sobic002G049700--Sobic001G092500 Sobic001G188100 Sobic001G188100 Sobic002G049700--Sobic001G188100 Sobic004G134000 Sobic004G134000 Sobic002G049700--Sobic004G134000 Sobic008G043300 Sobic008G043300 Sobic002G049700--Sobic008G043300 Sobic010G276100 Sobic010G276100 Sobic002G049700--Sobic010G276100 Sobic010G207800--Sobic007G014000 Sobic007G215200 Sobic007G215200 Sobic010G207800--Sobic007G215200 Sobic010G207800--Sobic001G261416 Sobic010G207800--Sobic010G090200 Sobic010G207800--Sobic010G216100 Sobic010G207800--Sobic005G006100 Sobic010G207800--Sobic010G240300 Sobic010G207800--Sobic001G167300 Sobic001G287400 Sobic001G287400 Sobic010G207800--Sobic001G287400
Octagon: transcription factors


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