Gene annotation
Transcriptome id Sobic.004G318900.1
Synonym Sb04g034970
Functional annotation stage II sporulation protein E, putative, expressed
UniProt C5XTL3
Pfam PF07228
Panther DB PTHR12320 PTHR12320:SF10
NCBI CDD KOG1379; Serine/threonine protein phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT4G16580 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os02g42270.1 : stage II sporulation protein E, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G340600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
2 Sobic.002G283200 expressed protein -
3 Sobic.009G177750 - -
4 Sobic.007G081701 - K10523: speckle-type POZ protein
5 Sobic.003G114600 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
6 Sobic.007G042800 expressed protein -
7 Sobic.007G102900 - -
8 Sobic.003G290500 profilin domain containing protein, expressed K05759: profilin
9 Sobic.002G380300 ras-related protein, putative, expressed K07893: Ras-related protein Rab-6A
10 Sobic.010G187700 GRAM and C2 domains containing protein, putative, expressed -
11 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
12 Sobic.003G305500 expressed protein -
13 Sobic.008G134600 - -
14 Sobic.003G250160 - -
15 Sobic.002G223650 - -
16 Sobic.006G069766 - -
17 Sobic.006G105100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
18 Sobic.005G191300 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.002G066100 - -
20 Sobic.008G043300 - -


Gene co-expression network
sample Sobic004G318900 Sobic004G318900 Sobic002G340600 Sobic002G340600 Sobic004G318900--Sobic002G340600 Sobic002G283200 Sobic002G283200 Sobic004G318900--Sobic002G283200 Sobic009G177750 Sobic009G177750 Sobic004G318900--Sobic009G177750 Sobic007G081701 Sobic007G081701 Sobic004G318900--Sobic007G081701 Sobic003G114600 Sobic003G114600 Sobic004G318900--Sobic003G114600 Sobic007G042800 Sobic007G042800 Sobic004G318900--Sobic007G042800 Sobic007G102900 Sobic007G102900 Sobic004G318900--Sobic007G102900 Sobic003G290500 Sobic003G290500 Sobic004G318900--Sobic003G290500 Sobic002G380300 Sobic002G380300 Sobic004G318900--Sobic002G380300 Sobic006G105100 Sobic006G105100 Sobic002G340600--Sobic006G105100 Sobic002G340600--Sobic002G380300 Sobic001G041600 Sobic001G041600 Sobic002G340600--Sobic001G041600 Sobic006G005300 Sobic006G005300 Sobic002G340600--Sobic006G005300 Sobic003G445300 Sobic003G445300 Sobic002G340600--Sobic003G445300 Sobic006G074150 Sobic006G074150 Sobic002G340600--Sobic006G074150 Sobic005G220400 Sobic005G220400 Sobic002G340600--Sobic005G220400 Sobic005G207700 Sobic005G207700 Sobic002G340600--Sobic005G207700 Sobic003G304600 Sobic003G304600 Sobic002G340600--Sobic003G304600 Sobic002G283200--Sobic003G114600 Sobic001G024800 Sobic001G024800 Sobic002G283200--Sobic001G024800 Sobic006G263500 Sobic006G263500 Sobic002G283200--Sobic006G263500 Sobic010G006900 Sobic010G006900 Sobic002G283200--Sobic010G006900 Sobic005G025600 Sobic005G025600 Sobic002G283200--Sobic005G025600 Sobic001G452500 Sobic001G452500 Sobic002G283200--Sobic001G452500 Sobic008G027900 Sobic008G027900 Sobic002G283200--Sobic008G027900 Sobic005G023700 Sobic005G023700 Sobic002G283200--Sobic005G023700 Sobic001G252900 Sobic001G252900 Sobic002G283200--Sobic001G252900 Sobic003G250160 Sobic003G250160 Sobic009G177750--Sobic003G250160 Sobic009G177750--Sobic007G081701 Sobic001G197050 Sobic001G197050 Sobic009G177750--Sobic001G197050 Sobic006G276801 Sobic006G276801 Sobic009G177750--Sobic006G276801 Sobic001G467400 Sobic001G467400 Sobic009G177750--Sobic001G467400 Sobic004G255900 Sobic004G255900 Sobic009G177750--Sobic004G255900 Sobic005G112500 Sobic005G112500 Sobic009G177750--Sobic005G112500 Sobic003G320000 Sobic003G320000 Sobic009G177750--Sobic003G320000 Sobic002G000200 Sobic002G000200 Sobic009G177750--Sobic002G000200 Sobic007G081701--Sobic003G250160 Sobic007G081701--Sobic009G177750 Sobic007G081701--Sobic006G276801 Sobic007G081701--Sobic001G197050 Sobic007G081701--Sobic005G112500 Sobic007G081701--Sobic001G467400 Sobic004G258000 Sobic004G258000 Sobic007G081701--Sobic004G258000 Sobic007G081701--Sobic004G255900 Sobic002G011300 Sobic002G011300 Sobic007G081701--Sobic002G011300 Sobic003G114600--Sobic002G283200 Sobic003G114600--Sobic001G024800 Sobic004G024000 Sobic004G024000 Sobic003G114600--Sobic004G024000 Sobic002G150400 Sobic002G150400 Sobic003G114600--Sobic002G150400 Sobic004G134600 Sobic004G134600 Sobic003G114600--Sobic004G134600 Sobic004G029032 Sobic004G029032 Sobic003G114600--Sobic004G029032 Sobic008G028200 Sobic008G028200 Sobic003G114600--Sobic008G028200 Sobic006G171500 Sobic006G171500 Sobic003G114600--Sobic006G171500 Sobic010G229801 Sobic010G229801 Sobic003G114600--Sobic010G229801 Sobic005G191300 Sobic005G191300 Sobic007G042800--Sobic005G191300 Sobic001G092500 Sobic001G092500 Sobic007G042800--Sobic001G092500 Sobic008G043300 Sobic008G043300 Sobic007G042800--Sobic008G043300 Sobic005G204600 Sobic005G204600 Sobic007G042800--Sobic005G204600 Sobic004G134000 Sobic004G134000 Sobic007G042800--Sobic004G134000 Sobic009G075400 Sobic009G075400 Sobic007G042800--Sobic009G075400 Sobic010G040400 Sobic010G040400 Sobic007G042800--Sobic010G040400 Sobic010G276100 Sobic010G276100 Sobic007G042800--Sobic010G276100 Sobic001G109900 Sobic001G109900 Sobic007G042800--Sobic001G109900 Sobic007G102900--Sobic003G250160 Sobic007G102900--Sobic009G177750 Sobic004G049300 Sobic004G049300 Sobic007G102900--Sobic004G049300 Sobic007G102900--Sobic007G081701 Sobic006G164800 Sobic006G164800 Sobic007G102900--Sobic006G164800 Sobic007G102900--Sobic001G197050 Sobic003G305500 Sobic003G305500 Sobic007G102900--Sobic003G305500 Sobic009G062600 Sobic009G062600 Sobic007G102900--Sobic009G062600 Sobic002G066600 Sobic002G066600 Sobic007G102900--Sobic002G066600 Sobic003G290500--Sobic002G380300 Sobic003G290500--Sobic006G105100 Sobic003G290500--Sobic001G041600 Sobic003G290500--Sobic003G304600 Sobic008G176500 Sobic008G176500 Sobic003G290500--Sobic008G176500 Sobic003G290500--Sobic002G283200 Sobic007G222100 Sobic007G222100 Sobic003G290500--Sobic007G222100 Sobic010G051000 Sobic010G051000 Sobic003G290500--Sobic010G051000 Sobic009G203900 Sobic009G203900 Sobic003G290500--Sobic009G203900 Sobic002G380300--Sobic006G105100 Sobic004G290500 Sobic004G290500 Sobic002G380300--Sobic004G290500 Sobic002G380300--Sobic008G176500 Sobic002G380300--Sobic001G041600 Sobic010G016200 Sobic010G016200 Sobic002G380300--Sobic010G016200 Sobic001G130500 Sobic001G130500 Sobic002G380300--Sobic001G130500 Sobic001G332000 Sobic001G332000 Sobic002G380300--Sobic001G332000 Sobic001G329200 Sobic001G329200 Sobic002G380300--Sobic001G329200 Sobic002G380300--Sobic010G040400
Octagon: transcription factors


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