Gene annotation
Transcriptome id Sobic.006G115700.1,Sobic.006G115700.2
Synonym MSP3, WRKY34, Sb06g019710, ATWRKY34
Functional annotation WRKY35, expressed
UniProt A0A1B6PLI0
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF10
NCBI CDD -
KEGG Orthology K18835; WRKY transcription factor 2
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G56270 : WRKY DNA-binding protein 2
RAP-DB (Rice) LOC_Os04g39570.1 : WRKY35, expressed
MaizeGDB (Corn) Zm00025a056278 , Zm00025a044587 , Zm00025a039749 , Zm00025a011034 , Zm00025a037544 , Zm00025a028138 , Zm00025a027025 , Zm00025a043480 , Zm00025a043967
Brachypodium PNT61277 , KQK04699 , KQJ83108 , KQK05779 , KQJ85838 , KQK05780 , KQK05782
Barley HORVU1Hr1G070250.1 , HORVU1Hr1G070250.3 , HORVU1Hr1G070250.2 , HORVU1Hr1G070250.5 , HORVU3Hr1G088200.3 , HORVU3Hr1G088200.1 , HORVU3Hr1G088200.7 , HORVU3Hr1G088200.6 , HORVU3Hr1G088200.5 , HORVU3Hr1G088200.4 , HORVU3Hr1G088200.9 , HORVU3Hr1G088200.8 , HORVU7Hr1G049130.1 , HORVU3Hr1G060500.8 , HORVU3Hr1G060500.9 , HORVU3Hr1G060500.6 , HORVU3Hr1G060500.7 , HORVU3Hr1G060500.4 , HORVU3Hr1G060500.5 , HORVU3Hr1G060500.2 , HORVU3Hr1G060500.3 , HORVU3Hr1G060500.1 , HORVU1Hr1G070250.4 , HORVU1Hr1G070250.7 , HORVU1Hr1G070250.6 , HORVU1Hr1G070250.9 , HORVU1Hr1G070250.8 , HORVU1Hr1G092130.4 , HORVU1Hr1G092130.5 , HORVU1Hr1G092130.6 , HORVU1Hr1G092130.7 , HORVU1Hr1G092130.1 , HORVU1Hr1G092130.2 , HORVU1Hr1G092130.3 , HORVU0Hr1G004890.3 , HORVU0Hr1G004890.2 , HORVU0Hr1G004890.5 , HORVU0Hr1G004890.4 , HORVU0Hr1G004890.7 , HORVU0Hr1G004890.6 , HORVU0Hr1G004890.9 , HORVU0Hr1G004890.8 , HORVU0Hr1G004890.15 , HORVU0Hr1G004890.14 , HORVU0Hr1G004890.17 , HORVU0Hr1G004890.16 , HORVU0Hr1G004890.11 , HORVU0Hr1G004890.10 , HORVU0Hr1G004890.12 , HORVU0Hr1G004890.19 , HORVU0Hr1G004890.18
Wheat TraesCS2A02G330500 , TraesCS1B02G308200 , TraesCS3D02G341100 , TraesCS3B02G270500 , TraesCS3A02G347500 , TraesCS2B02G351600 , TraesCS1D02G292700 , TraesCS3B02G379200 , TraesCS3B02G379200 , TraesCS3D02G242500 , TraesCS2D02G332300 , TraesCS3A02G242500 , TraesCS1D02G430000 , TraesCS1A02G298600
Populus -


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cDNA sequences
Sobic.006G115700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G297100 expressed protein -
2 Sobic.007G142801 - -
3 Sobic.001G135800 pentatricopeptide, putative, expressed -
4 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
5 Sobic.009G061601 - -
6 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
7 Sobic.005G176700 methyltransferase, putative, expressed -
8 Sobic.006G204500 pectinacetylesterase domain containing protein, expressed -
9 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
10 Sobic.008G020800 GASR10 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
11 Sobic.001G172100 - -
12 Sobic.008G055200 dirigent, putative, expressed -
13 Sobic.004G136100 - -
14 Sobic.007G215200 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
15 Sobic.004G273600 RNA recognition motif containing protein, putative, expressed -
16 Sobic.007G197000 "Candidate orthologue to the wheat Pm40 gene, probable glucan endo-1,3-betaglucosidase A6"(PubMedID : 27755575)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
17 Sobic.010G188500 OsSub50 - Putative Subtilisin homologue, expressed -
18 Sobic.007G131000 dynamin-2B, putative, expressed K01528: dynamin 1/3
19 Sobic.005G204600 OsMADS68 - MADS-box family gene with MIKC , type-box, expressed -
20 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3


Gene co-expression network
sample Sobic006G115700 Sobic006G115700 Sobic003G297100 Sobic003G297100 Sobic006G115700--Sobic003G297100 Sobic007G142801 Sobic007G142801 Sobic006G115700--Sobic007G142801 Sobic001G135800 Sobic001G135800 Sobic006G115700--Sobic001G135800 Sobic002G364700 Sobic002G364700 Sobic006G115700--Sobic002G364700 Sobic009G061601 Sobic009G061601 Sobic006G115700--Sobic009G061601 Sobic001G432200 Sobic001G432200 Sobic006G115700--Sobic001G432200 Sobic005G176700 Sobic005G176700 Sobic006G115700--Sobic005G176700 Sobic006G204500 Sobic006G204500 Sobic006G115700--Sobic006G204500 Sobic001G370400 Sobic001G370400 Sobic006G115700--Sobic001G370400 Sobic007G131000 Sobic007G131000 Sobic003G297100--Sobic007G131000 Sobic003G297100--Sobic009G061601 Sobic001G093100 Sobic001G093100 Sobic003G297100--Sobic001G093100 Sobic003G297100--Sobic007G142801 Sobic003G164400 Sobic003G164400 Sobic003G297100--Sobic003G164400 Sobic007G215200 Sobic007G215200 Sobic003G297100--Sobic007G215200 Sobic003G304600 Sobic003G304600 Sobic003G297100--Sobic003G304600 Sobic006G205400 Sobic006G205400 Sobic003G297100--Sobic006G205400 Sobic005G026700 Sobic005G026700 Sobic003G297100--Sobic005G026700 Sobic001G172100 Sobic001G172100 Sobic007G142801--Sobic001G172100 Sobic007G142801--Sobic003G297100 Sobic007G142801--Sobic005G026700 Sobic005G002100 Sobic005G002100 Sobic007G142801--Sobic005G002100 Sobic007G142801--Sobic003G164400 Sobic002G000200 Sobic002G000200 Sobic007G142801--Sobic002G000200 Sobic007G142801--Sobic007G131000 Sobic005G214800 Sobic005G214800 Sobic007G142801--Sobic005G214800 Sobic001G246001 Sobic001G246001 Sobic007G142801--Sobic001G246001 Sobic001G135800--Sobic006G115700 Sobic001G135800--Sobic007G142801 Sobic001G135800--Sobic003G297100 Sobic001G135800--Sobic001G172100 Sobic001G135800--Sobic005G026700 Sobic001G135800--Sobic003G164400 Sobic001G135800--Sobic002G000200 Sobic001G135800--Sobic005G002100 Sobic009G061500 Sobic009G061500 Sobic001G135800--Sobic009G061500 Sobic002G364700--Sobic006G204500 Sobic002G364700--Sobic005G176700 Sobic002G364700--Sobic001G370400 Sobic002G364700--Sobic006G115700 Sobic008G020800 Sobic008G020800 Sobic002G364700--Sobic008G020800 Sobic002G307400 Sobic002G307400 Sobic002G364700--Sobic002G307400 Sobic004G100300 Sobic004G100300 Sobic002G364700--Sobic004G100300 Sobic003G070400 Sobic003G070400 Sobic002G364700--Sobic003G070400 Sobic006G070032 Sobic006G070032 Sobic002G364700--Sobic006G070032 Sobic009G061601--Sobic007G131000 Sobic009G061601--Sobic007G215200 Sobic001G294500 Sobic001G294500 Sobic009G061601--Sobic001G294500 Sobic003G151400 Sobic003G151400 Sobic009G061601--Sobic003G151400 Sobic009G061601--Sobic006G205400 Sobic005G204600 Sobic005G204600 Sobic009G061601--Sobic005G204600 Sobic001G063300 Sobic001G063300 Sobic009G061601--Sobic001G063300 Sobic010G207800 Sobic010G207800 Sobic009G061601--Sobic010G207800 Sobic001G261416 Sobic001G261416 Sobic009G061601--Sobic001G261416 Sobic003G093100 Sobic003G093100 Sobic001G432200--Sobic003G093100 Sobic001G432200--Sobic001G370400 Sobic001G432200--Sobic003G297100 Sobic001G432200--Sobic009G061601 Sobic001G432200--Sobic003G151400 Sobic002G088600 Sobic002G088600 Sobic001G432200--Sobic002G088600 Sobic004G290600 Sobic004G290600 Sobic001G432200--Sobic004G290600 Sobic001G432200--Sobic006G204500 Sobic001G432200--Sobic001G294500 Sobic010G121700 Sobic010G121700 Sobic005G176700--Sobic010G121700 Sobic005G176700--Sobic008G020800 Sobic008G024200 Sobic008G024200 Sobic005G176700--Sobic008G024200 Sobic005G189100 Sobic005G189100 Sobic005G176700--Sobic005G189100 Sobic009G234900 Sobic009G234900 Sobic005G176700--Sobic009G234900 Sobic002G006200 Sobic002G006200 Sobic005G176700--Sobic002G006200 Sobic001G089300 Sobic001G089300 Sobic005G176700--Sobic001G089300 Sobic001G167300 Sobic001G167300 Sobic005G176700--Sobic001G167300 Sobic001G143700 Sobic001G143700 Sobic005G176700--Sobic001G143700 Sobic006G204500--Sobic009G061601 Sobic004G273600 Sobic004G273600 Sobic006G204500--Sobic004G273600 Sobic006G204500--Sobic008G020800 Sobic001G402900 Sobic001G402900 Sobic006G204500--Sobic001G402900 Sobic010G003200 Sobic010G003200 Sobic006G204500--Sobic010G003200 Sobic002G372000 Sobic002G372000 Sobic006G204500--Sobic002G372000 Sobic007G197000 Sobic007G197000 Sobic006G204500--Sobic007G197000 Sobic006G204500--Sobic002G364700 Sobic004G014200 Sobic004G014200 Sobic006G204500--Sobic004G014200 Sobic001G370400--Sobic009G061601 Sobic001G370400--Sobic003G297100 Sobic001G370400--Sobic001G063300 Sobic001G370400--Sobic006G205400 Sobic001G370400--Sobic007G131000 Sobic001G370400--Sobic003G151400 Sobic001G370400--Sobic007G215200 Sobic002G015900 Sobic002G015900 Sobic001G370400--Sobic002G015900 Sobic001G370400--Sobic001G294500
Octagon: transcription factors


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