Gene annotation
Transcriptome id Sobic.009G178400.1
Synonym Sb09g023860
Functional annotation oxidoreductase, putative, expressed
UniProt C5YZX3
Pfam PF01549 PF03171
Panther DB PTHR10869 PTHR10869:SF64
NCBI CDD -
KEGG Orthology K00472; prolyl 4-hydroxylase
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G18900 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os05g41010.1 : oxidoreductase, putative, expressed
MaizeGDB (Corn) Zm00025a044057
Brachypodium KQK05681
Barley HORVU1Hr1G068850.4 , HORVU1Hr1G068850.2 , HORVU1Hr1G068850.3 , HORVU1Hr1G068850.1 , HORVU0Hr1G025870.9 , HORVU0Hr1G025870.2 , HORVU0Hr1G025870.3 , HORVU0Hr1G025870.1 , HORVU0Hr1G025870.6 , HORVU0Hr1G025870.7 , HORVU0Hr1G025870.4 , HORVU0Hr1G025870.5 , HORVU0Hr1G025870.8 , HORVU0Hr1G025870.10
Wheat -
Populus -


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cDNA sequences
Sobic.009G178400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.001G340800 exocyst complex component 6, putative, expressed -
3 Sobic.002G233600 glycogen operon protein glgX, putative, expressed K01214: ISA, isoamylase
4 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
5 Sobic.007G039200 MYB family transcription factor, putative, expressed -
6 Sobic.007G048101 - -
7 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
8 Sobic.001G308000 viral A-type inclusion protein repeat containing protein, expressed -
9 Sobic.002G088600 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
10 Sobic.010G073900 expressed protein -
11 Sobic.010G128350 - -
12 Sobic.009G238650 - -
13 Sobic.003G024100 MRH1, putative, expressed -
14 Sobic.001G387300 exostosin family domain containing protein, expressed -
15 Sobic.003G093100 cyclin-related protein, putative, expressed -
16 Sobic.010G010201 - -
17 Sobic.008G136601 - -
18 Sobic.009G202000 GATA zinc finger domain containing protein, expressed -
19 Sobic.004G177900 - -
20 Sobic.006G001100 ELMO/CED-12 family protein, putative, expressed -


Gene co-expression network
sample Sobic009G178400 Sobic009G178400 Sobic001G384200 Sobic001G384200 Sobic009G178400--Sobic001G384200 Sobic001G340800 Sobic001G340800 Sobic009G178400--Sobic001G340800 Sobic002G233600 Sobic002G233600 Sobic009G178400--Sobic002G233600 Sobic008G166100 Sobic008G166100 Sobic009G178400--Sobic008G166100 Sobic007G039200 Sobic007G039200 Sobic009G178400--Sobic007G039200 Sobic007G048101 Sobic007G048101 Sobic009G178400--Sobic007G048101 Sobic001G432200 Sobic001G432200 Sobic009G178400--Sobic001G432200 Sobic001G308000 Sobic001G308000 Sobic009G178400--Sobic001G308000 Sobic002G088600 Sobic002G088600 Sobic009G178400--Sobic002G088600 Sobic003G024100 Sobic003G024100 Sobic001G384200--Sobic003G024100 Sobic001G384200--Sobic001G340800 Sobic001G384200--Sobic008G166100 Sobic001G384200--Sobic009G178400 Sobic001G370400 Sobic001G370400 Sobic001G384200--Sobic001G370400 Sobic003G244400 Sobic003G244400 Sobic001G384200--Sobic003G244400 Sobic001G384200--Sobic001G432200 Sobic003G175350 Sobic003G175350 Sobic001G384200--Sobic003G175350 Sobic001G384200--Sobic007G039200 Sobic001G340800--Sobic001G370400 Sobic009G061601 Sobic009G061601 Sobic001G340800--Sobic009G061601 Sobic008G136601 Sobic008G136601 Sobic001G340800--Sobic008G136601 Sobic004G290600 Sobic004G290600 Sobic001G340800--Sobic004G290600 Sobic009G061500 Sobic009G061500 Sobic001G340800--Sobic009G061500 Sobic008G020800 Sobic008G020800 Sobic001G340800--Sobic008G020800 Sobic001G294500 Sobic001G294500 Sobic001G340800--Sobic001G294500 Sobic007G131000 Sobic007G131000 Sobic001G340800--Sobic007G131000 Sobic003G093100 Sobic003G093100 Sobic001G340800--Sobic003G093100 Sobic002G233600--Sobic009G178400 Sobic002G233600--Sobic001G308000 Sobic009G230800 Sobic009G230800 Sobic002G233600--Sobic009G230800 Sobic002G233600--Sobic007G039200 Sobic002G233600--Sobic007G048101 Sobic009G238650 Sobic009G238650 Sobic002G233600--Sobic009G238650 Sobic002G233600--Sobic001G340800 Sobic006G001100 Sobic006G001100 Sobic002G233600--Sobic006G001100 Sobic003G358600 Sobic003G358600 Sobic002G233600--Sobic003G358600 Sobic008G166100--Sobic001G384200 Sobic008G166100--Sobic007G039200 Sobic008G166100--Sobic009G178400 Sobic001G322400 Sobic001G322400 Sobic008G166100--Sobic001G322400 Sobic008G166100--Sobic003G024100 Sobic009G202000 Sobic009G202000 Sobic008G166100--Sobic009G202000 Sobic008G166100--Sobic001G340800 Sobic001G387300 Sobic001G387300 Sobic008G166100--Sobic001G387300 Sobic008G166100--Sobic001G432200 Sobic007G039200--Sobic001G340800 Sobic002G389600 Sobic002G389600 Sobic007G039200--Sobic002G389600 Sobic007G039200--Sobic009G061500 Sobic007G039200--Sobic008G136601 Sobic007G039200--Sobic009G230800 Sobic007G039200--Sobic004G290600 Sobic007G039200--Sobic008G166100 Sobic007G039200--Sobic001G384200 Sobic008G159701 Sobic008G159701 Sobic007G039200--Sobic008G159701 Sobic007G048101--Sobic009G238650 Sobic007G048101--Sobic002G088600 Sobic007G048101--Sobic003G093100 Sobic004G177900 Sobic004G177900 Sobic007G048101--Sobic004G177900 Sobic006G239500 Sobic006G239500 Sobic007G048101--Sobic006G239500 Sobic004G349600 Sobic004G349600 Sobic007G048101--Sobic004G349600 Sobic008G025400 Sobic008G025400 Sobic007G048101--Sobic008G025400 Sobic010G073900 Sobic010G073900 Sobic007G048101--Sobic010G073900 Sobic007G048101--Sobic001G294500 Sobic001G432200--Sobic003G093100 Sobic001G432200--Sobic001G370400 Sobic003G297100 Sobic003G297100 Sobic001G432200--Sobic003G297100 Sobic001G432200--Sobic009G061601 Sobic003G151400 Sobic003G151400 Sobic001G432200--Sobic003G151400 Sobic001G432200--Sobic002G088600 Sobic001G432200--Sobic004G290600 Sobic006G204500 Sobic006G204500 Sobic001G432200--Sobic006G204500 Sobic001G432200--Sobic001G294500 Sobic005G120400 Sobic005G120400 Sobic001G308000--Sobic005G120400 Sobic010G177500 Sobic010G177500 Sobic001G308000--Sobic010G177500 Sobic005G092100 Sobic005G092100 Sobic001G308000--Sobic005G092100 Sobic001G308000--Sobic004G349600 Sobic001G308000--Sobic009G238650 Sobic003G191350 Sobic003G191350 Sobic001G308000--Sobic003G191350 Sobic001G308000--Sobic002G088600 Sobic002G372000 Sobic002G372000 Sobic001G308000--Sobic002G372000 Sobic001G165901 Sobic001G165901 Sobic001G308000--Sobic001G165901 Sobic002G088600--Sobic004G177900 Sobic002G088600--Sobic003G093100 Sobic002G088600--Sobic001G294500 Sobic002G088600--Sobic008G025400 Sobic002G088600--Sobic003G151400 Sobic004G328500 Sobic004G328500 Sobic002G088600--Sobic004G328500 Sobic002G088600--Sobic007G131000 Sobic002G088600--Sobic009G061601 Sobic005G043300 Sobic005G043300 Sobic002G088600--Sobic005G043300
Octagon: transcription factors


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