Gene annotation
Transcriptome id Sobic.001G387300.1
Synonym Sb01g036720
Functional annotation exostosin family domain containing protein, expressed
UniProt C5X1R3
Pfam PF03016
Panther DB PTHR11062 PTHR11062:SF96
NCBI CDD KOG1021; Acetylglucosaminyltransferase EXT1/exostosin 1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G45400 : exostosin family protein
RAP-DB (Rice) LOC_Os03g20850.1 : exostosin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002269 , Zm00025a021323 , Zm00025a052472
Brachypodium KQJ85213 , KQK21888
Barley -
Wheat TraesCS4B02G175000 , TraesCS4D02G176900 , TraesCS4A02G129600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
3 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
4 Sobic.001G322400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
5 Sobic.004G113600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
6 Sobic.009G202000 GATA zinc finger domain containing protein, expressed -
7 Sobic.003G244400 OsFBK1 - F-box domain and kelch repeat containing protein, expressed -
8 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
9 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
10 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
11 Sobic.007G212500 nodulation protein-related, putative, expressed -
12 Sobic.009G242600 ATPCME, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
13 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
14 Sobic.002G389600 transcription regulator, putative, expressed -
15 Sobic.007G039200 MYB family transcription factor, putative, expressed -
16 Sobic.003G093100 cyclin-related protein, putative, expressed -
17 Sobic.010G073900 expressed protein -
18 Sobic.001G340800 exocyst complex component 6, putative, expressed -
19 Sobic.004G290600 beige/BEACH domain containing protein, expressed -
20 Sobic.003G024100 MRH1, putative, expressed -


Gene co-expression network
sample Sobic001G387300 Sobic001G387300 Sobic001G384200 Sobic001G384200 Sobic001G387300--Sobic001G384200 Sobic009G178400 Sobic009G178400 Sobic001G387300--Sobic009G178400 Sobic008G166100 Sobic008G166100 Sobic001G387300--Sobic008G166100 Sobic001G322400 Sobic001G322400 Sobic001G387300--Sobic001G322400 Sobic004G113600 Sobic004G113600 Sobic001G387300--Sobic004G113600 Sobic009G202000 Sobic009G202000 Sobic001G387300--Sobic009G202000 Sobic003G244400 Sobic003G244400 Sobic001G387300--Sobic003G244400 Sobic001G072000 Sobic001G072000 Sobic001G387300--Sobic001G072000 Sobic001G432200 Sobic001G432200 Sobic001G387300--Sobic001G432200 Sobic003G024100 Sobic003G024100 Sobic001G384200--Sobic003G024100 Sobic001G340800 Sobic001G340800 Sobic001G384200--Sobic001G340800 Sobic001G384200--Sobic008G166100 Sobic001G384200--Sobic009G178400 Sobic001G370400 Sobic001G370400 Sobic001G384200--Sobic001G370400 Sobic001G384200--Sobic003G244400 Sobic001G384200--Sobic001G432200 Sobic003G175350 Sobic003G175350 Sobic001G384200--Sobic003G175350 Sobic007G039200 Sobic007G039200 Sobic001G384200--Sobic007G039200 Sobic009G178400--Sobic001G384200 Sobic009G178400--Sobic001G340800 Sobic002G233600 Sobic002G233600 Sobic009G178400--Sobic002G233600 Sobic009G178400--Sobic008G166100 Sobic009G178400--Sobic007G039200 Sobic007G048101 Sobic007G048101 Sobic009G178400--Sobic007G048101 Sobic009G178400--Sobic001G432200 Sobic001G308000 Sobic001G308000 Sobic009G178400--Sobic001G308000 Sobic002G088600 Sobic002G088600 Sobic009G178400--Sobic002G088600 Sobic008G166100--Sobic001G384200 Sobic008G166100--Sobic007G039200 Sobic008G166100--Sobic009G178400 Sobic008G166100--Sobic001G322400 Sobic008G166100--Sobic003G024100 Sobic008G166100--Sobic009G202000 Sobic008G166100--Sobic001G340800 Sobic008G166100--Sobic001G387300 Sobic008G166100--Sobic001G432200 Sobic001G322400--Sobic001G072000 Sobic010G073900 Sobic010G073900 Sobic001G322400--Sobic010G073900 Sobic001G322400--Sobic001G432200 Sobic001G322400--Sobic008G166100 Sobic004G279200 Sobic004G279200 Sobic001G322400--Sobic004G279200 Sobic001G322400--Sobic007G048101 Sobic001G322400--Sobic009G202000 Sobic009G238650 Sobic009G238650 Sobic001G322400--Sobic009G238650 Sobic003G407700 Sobic003G407700 Sobic001G322400--Sobic003G407700 Sobic001G112600 Sobic001G112600 Sobic004G113600--Sobic001G112600 Sobic004G113600--Sobic003G244400 Sobic004G358000 Sobic004G358000 Sobic004G113600--Sobic004G358000 Sobic009G242200 Sobic009G242200 Sobic004G113600--Sobic009G242200 Sobic002G170100 Sobic002G170100 Sobic004G113600--Sobic002G170100 Sobic005G050400 Sobic005G050400 Sobic004G113600--Sobic005G050400 Sobic004G113600--Sobic001G384200 Sobic001G400000 Sobic001G400000 Sobic004G113600--Sobic001G400000 Sobic005G054150 Sobic005G054150 Sobic004G113600--Sobic005G054150 Sobic009G202000--Sobic001G432200 Sobic004G290600 Sobic004G290600 Sobic009G202000--Sobic004G290600 Sobic010G142650 Sobic010G142650 Sobic009G202000--Sobic010G142650 Sobic009G202000--Sobic002G088600 Sobic003G093100 Sobic003G093100 Sobic009G202000--Sobic003G093100 Sobic010G003200 Sobic010G003200 Sobic009G202000--Sobic010G003200 Sobic009G202000--Sobic001G370400 Sobic006G171600 Sobic006G171600 Sobic009G202000--Sobic006G171600 Sobic004G177900 Sobic004G177900 Sobic009G202000--Sobic004G177900 Sobic003G244400--Sobic001G370400 Sobic001G103100 Sobic001G103100 Sobic003G244400--Sobic001G103100 Sobic008G055200 Sobic008G055200 Sobic003G244400--Sobic008G055200 Sobic003G244400--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic003G244400--Sobic006G204500 Sobic003G244400--Sobic001G340800 Sobic002G364700 Sobic002G364700 Sobic003G244400--Sobic002G364700 Sobic007G091400 Sobic007G091400 Sobic003G244400--Sobic007G091400 Sobic003G244400--Sobic010G003200 Sobic001G072000--Sobic001G322400 Sobic001G072000--Sobic005G050400 Sobic001G072000--Sobic001G112600 Sobic001G072000--Sobic004G279200 Sobic008G156600 Sobic008G156600 Sobic001G072000--Sobic008G156600 Sobic001G072000--Sobic001G432200 Sobic009G163100 Sobic009G163100 Sobic001G072000--Sobic009G163100 Sobic001G072000--Sobic009G242200 Sobic004G038500 Sobic004G038500 Sobic001G072000--Sobic004G038500 Sobic001G432200--Sobic003G093100 Sobic001G432200--Sobic001G370400 Sobic003G297100 Sobic003G297100 Sobic001G432200--Sobic003G297100 Sobic009G061601 Sobic009G061601 Sobic001G432200--Sobic009G061601 Sobic003G151400 Sobic003G151400 Sobic001G432200--Sobic003G151400 Sobic001G432200--Sobic002G088600 Sobic001G432200--Sobic004G290600 Sobic001G432200--Sobic006G204500 Sobic001G294500 Sobic001G294500 Sobic001G432200--Sobic001G294500
Octagon: transcription factors


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