Gene annotation
Transcriptome id Sobic.003G244400.1
Synonym HS, HWS, Sb03g030090
Functional annotation OsFBK1 - F-box domain and kelch repeat containing protein, expressed
UniProt C5XFC2
Pfam PF12937
Panther DB PTHR10706 PTHR10706:SF127
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G61590 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os01g47050.1 : OsFBK1 - F-box domain and kelch repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a028172
Brachypodium -
Barley HORVU3Hr1G059460.1 , HORVU3Hr1G059460.2
Wheat -
Populus PNT03867 , PNT03868 , PNT03865 , PNT03866


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
2 Sobic.001G103100 DNA binding protein, putative, expressed -
3 Sobic.008G055200 dirigent, putative, expressed -
4 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
5 Sobic.006G204500 pectinacetylesterase domain containing protein, expressed -
6 Sobic.001G340800 exocyst complex component 6, putative, expressed -
7 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
8 Sobic.007G091400 diacylglycerol kinase catalytic domain family protein, expressed K00901: dgkA, diacylglycerol kinase (ATP)
9 Sobic.010G003200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
10 Sobic.003G151400 protein kinase, putative, expressed K13436: pto-interacting protein 1
11 Sobic.009G061601 - -
12 Sobic.002G381500 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
13 Sobic.002G257001 - K13947: auxin efflux carrier family protein
14 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
15 Sobic.003G093100 cyclin-related protein, putative, expressed -
16 Sobic.007G212500 nodulation protein-related, putative, expressed -
17 Sobic.001G279000 OsFBX382 - F-box domain containing protein, expressed -
18 Sobic.004G094400 - -
19 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
20 Sobic.004G328500 expressed protein -


Gene co-expression network
sample Sobic003G244400 Sobic003G244400 Sobic001G370400 Sobic001G370400 Sobic003G244400--Sobic001G370400 Sobic001G103100 Sobic001G103100 Sobic003G244400--Sobic001G103100 Sobic008G055200 Sobic008G055200 Sobic003G244400--Sobic008G055200 Sobic001G432200 Sobic001G432200 Sobic003G244400--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic003G244400--Sobic006G204500 Sobic001G340800 Sobic001G340800 Sobic003G244400--Sobic001G340800 Sobic002G364700 Sobic002G364700 Sobic003G244400--Sobic002G364700 Sobic007G091400 Sobic007G091400 Sobic003G244400--Sobic007G091400 Sobic010G003200 Sobic010G003200 Sobic003G244400--Sobic010G003200 Sobic009G061601 Sobic009G061601 Sobic001G370400--Sobic009G061601 Sobic003G297100 Sobic003G297100 Sobic001G370400--Sobic003G297100 Sobic001G063300 Sobic001G063300 Sobic001G370400--Sobic001G063300 Sobic006G205400 Sobic006G205400 Sobic001G370400--Sobic006G205400 Sobic007G131000 Sobic007G131000 Sobic001G370400--Sobic007G131000 Sobic003G151400 Sobic003G151400 Sobic001G370400--Sobic003G151400 Sobic007G215200 Sobic007G215200 Sobic001G370400--Sobic007G215200 Sobic002G015900 Sobic002G015900 Sobic001G370400--Sobic002G015900 Sobic001G294500 Sobic001G294500 Sobic001G370400--Sobic001G294500 Sobic001G103100--Sobic007G091400 Sobic010G016200 Sobic010G016200 Sobic001G103100--Sobic010G016200 Sobic009G105100 Sobic009G105100 Sobic001G103100--Sobic009G105100 Sobic005G145400 Sobic005G145400 Sobic001G103100--Sobic005G145400 Sobic004G099200 Sobic004G099200 Sobic001G103100--Sobic004G099200 Sobic010G276100 Sobic010G276100 Sobic001G103100--Sobic010G276100 Sobic009G175400 Sobic009G175400 Sobic001G103100--Sobic009G175400 Sobic004G071900 Sobic004G071900 Sobic001G103100--Sobic004G071900 Sobic010G252600 Sobic010G252600 Sobic001G103100--Sobic010G252600 Sobic005G176700 Sobic005G176700 Sobic008G055200--Sobic005G176700 Sobic005G148000 Sobic005G148000 Sobic008G055200--Sobic005G148000 Sobic005G040100 Sobic005G040100 Sobic008G055200--Sobic005G040100 Sobic001G192300 Sobic001G192300 Sobic008G055200--Sobic001G192300 Sobic004G094400 Sobic004G094400 Sobic008G055200--Sobic004G094400 Sobic001G143700 Sobic001G143700 Sobic008G055200--Sobic001G143700 Sobic002G006200 Sobic002G006200 Sobic008G055200--Sobic002G006200 Sobic002G097300 Sobic002G097300 Sobic008G055200--Sobic002G097300 Sobic008G138400 Sobic008G138400 Sobic008G055200--Sobic008G138400 Sobic003G093100 Sobic003G093100 Sobic001G432200--Sobic003G093100 Sobic001G432200--Sobic001G370400 Sobic001G432200--Sobic003G297100 Sobic001G432200--Sobic009G061601 Sobic001G432200--Sobic003G151400 Sobic002G088600 Sobic002G088600 Sobic001G432200--Sobic002G088600 Sobic004G290600 Sobic004G290600 Sobic001G432200--Sobic004G290600 Sobic001G432200--Sobic006G204500 Sobic001G432200--Sobic001G294500 Sobic006G204500--Sobic009G061601 Sobic004G273600 Sobic004G273600 Sobic006G204500--Sobic004G273600 Sobic008G020800 Sobic008G020800 Sobic006G204500--Sobic008G020800 Sobic001G402900 Sobic001G402900 Sobic006G204500--Sobic001G402900 Sobic006G204500--Sobic010G003200 Sobic002G372000 Sobic002G372000 Sobic006G204500--Sobic002G372000 Sobic007G197000 Sobic007G197000 Sobic006G204500--Sobic007G197000 Sobic006G204500--Sobic002G364700 Sobic004G014200 Sobic004G014200 Sobic006G204500--Sobic004G014200 Sobic001G340800--Sobic001G370400 Sobic001G340800--Sobic009G061601 Sobic008G136601 Sobic008G136601 Sobic001G340800--Sobic008G136601 Sobic001G340800--Sobic004G290600 Sobic009G061500 Sobic009G061500 Sobic001G340800--Sobic009G061500 Sobic001G340800--Sobic008G020800 Sobic001G340800--Sobic001G294500 Sobic001G340800--Sobic007G131000 Sobic001G340800--Sobic003G093100 Sobic002G364700--Sobic006G204500 Sobic002G364700--Sobic005G176700 Sobic002G364700--Sobic001G370400 Sobic006G115700 Sobic006G115700 Sobic002G364700--Sobic006G115700 Sobic002G364700--Sobic008G020800 Sobic002G307400 Sobic002G307400 Sobic002G364700--Sobic002G307400 Sobic004G100300 Sobic004G100300 Sobic002G364700--Sobic004G100300 Sobic003G070400 Sobic003G070400 Sobic002G364700--Sobic003G070400 Sobic006G070032 Sobic006G070032 Sobic002G364700--Sobic006G070032 Sobic004G070600 Sobic004G070600 Sobic007G091400--Sobic004G070600 Sobic009G102700 Sobic009G102700 Sobic007G091400--Sobic009G102700 Sobic007G091400--Sobic010G252600 Sobic002G254700 Sobic002G254700 Sobic007G091400--Sobic002G254700 Sobic001G528700 Sobic001G528700 Sobic007G091400--Sobic001G528700 Sobic002G295800 Sobic002G295800 Sobic007G091400--Sobic002G295800 Sobic001G452500 Sobic001G452500 Sobic007G091400--Sobic001G452500 Sobic007G091400--Sobic009G105100 Sobic006G026200 Sobic006G026200 Sobic007G091400--Sobic006G026200 Sobic010G003200--Sobic004G273600 Sobic010G003200--Sobic009G105100 Sobic010G003200--Sobic003G151400 Sobic010G003200--Sobic002G295800 Sobic010G003200--Sobic010G252600 Sobic010G003200--Sobic002G372000 Sobic005G110160 Sobic005G110160 Sobic010G003200--Sobic005G110160 Sobic001G142501 Sobic001G142501 Sobic010G003200--Sobic001G142501 Sobic005G092100 Sobic005G092100 Sobic010G003200--Sobic005G092100
Octagon: transcription factors


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