Gene annotation
Transcriptome id Sobic.001G340800.1
Synonym SEC15A, Sb01g032760
Functional annotation exocyst complex component 6, putative, expressed
UniProt C5WWN4
Pfam PF04091
Panther DB PTHR12702 PTHR12702:SF4
NCBI CDD KOG2176; Exocyst complex, subunit SEC15
KEGG Orthology -
Gene Ontology GO:0006904; vesicle docking involved in exocytosis GO:0000145exocyst


Orthologs (automatic annotation)
TAIR AT3G56640 : exocyst complex component sec15A
RAP-DB (Rice) LOC_Os03g06760.1 : exocyst complex component 6, putative, expressed
MaizeGDB (Corn) Zm00025a052168 , Zm00025a011798
Brachypodium KQK23490 , KQK23485
Barley HORVU4Hr1G073920.1 , HORVU4Hr1G074030.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G370400 aberrant pollen transmission 1, putative, expressed -
2 Sobic.009G061601 - -
3 Sobic.008G136601 - -
4 Sobic.004G290600 beige/BEACH domain containing protein, expressed -
5 Sobic.009G061500 - -
6 Sobic.008G020800 GASR10 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
7 Sobic.001G294500 phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
8 Sobic.007G131000 dynamin-2B, putative, expressed K01528: dynamin 1/3
9 Sobic.003G093100 cyclin-related protein, putative, expressed -
10 Sobic.003G151400 protein kinase, putative, expressed K13436: pto-interacting protein 1
11 Sobic.004G177900 - -
12 Sobic.003G297100 expressed protein -
13 Sobic.005G176700 methyltransferase, putative, expressed -
14 Sobic.008G097966 - -
15 Sobic.007G215200 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
16 Sobic.007G133800 - -
17 Sobic.003G133000 major facilitator superfamily antiporter, putative, expressed -
18 Sobic.006G205400 villin protein, putative, expressed -
19 Sobic.004G328500 expressed protein -
20 Sobic.001G063300 CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic001G340800 Sobic001G340800 Sobic001G370400 Sobic001G370400 Sobic001G340800--Sobic001G370400 Sobic009G061601 Sobic009G061601 Sobic001G340800--Sobic009G061601 Sobic008G136601 Sobic008G136601 Sobic001G340800--Sobic008G136601 Sobic004G290600 Sobic004G290600 Sobic001G340800--Sobic004G290600 Sobic009G061500 Sobic009G061500 Sobic001G340800--Sobic009G061500 Sobic008G020800 Sobic008G020800 Sobic001G340800--Sobic008G020800 Sobic001G294500 Sobic001G294500 Sobic001G340800--Sobic001G294500 Sobic007G131000 Sobic007G131000 Sobic001G340800--Sobic007G131000 Sobic003G093100 Sobic003G093100 Sobic001G340800--Sobic003G093100 Sobic001G370400--Sobic009G061601 Sobic003G297100 Sobic003G297100 Sobic001G370400--Sobic003G297100 Sobic001G063300 Sobic001G063300 Sobic001G370400--Sobic001G063300 Sobic006G205400 Sobic006G205400 Sobic001G370400--Sobic006G205400 Sobic001G370400--Sobic007G131000 Sobic003G151400 Sobic003G151400 Sobic001G370400--Sobic003G151400 Sobic007G215200 Sobic007G215200 Sobic001G370400--Sobic007G215200 Sobic002G015900 Sobic002G015900 Sobic001G370400--Sobic002G015900 Sobic001G370400--Sobic001G294500 Sobic009G061601--Sobic007G131000 Sobic009G061601--Sobic007G215200 Sobic009G061601--Sobic001G294500 Sobic009G061601--Sobic003G151400 Sobic009G061601--Sobic006G205400 Sobic005G204600 Sobic005G204600 Sobic009G061601--Sobic005G204600 Sobic009G061601--Sobic001G063300 Sobic010G207800 Sobic010G207800 Sobic009G061601--Sobic010G207800 Sobic001G261416 Sobic001G261416 Sobic009G061601--Sobic001G261416 Sobic006G001100 Sobic006G001100 Sobic008G136601--Sobic006G001100 Sobic006G269101 Sobic006G269101 Sobic008G136601--Sobic006G269101 Sobic008G136601--Sobic009G061601 Sobic001G212500 Sobic001G212500 Sobic008G136601--Sobic001G212500 Sobic005G043300 Sobic005G043300 Sobic008G136601--Sobic005G043300 Sobic001G165700 Sobic001G165700 Sobic008G136601--Sobic001G165700 Sobic002G126400 Sobic002G126400 Sobic008G136601--Sobic002G126400 Sobic008G136601--Sobic007G131000 Sobic003G445300 Sobic003G445300 Sobic008G136601--Sobic003G445300 Sobic004G290600--Sobic001G294500 Sobic004G290600--Sobic009G061601 Sobic004G290600--Sobic006G205400 Sobic002G106600 Sobic002G106600 Sobic004G290600--Sobic002G106600 Sobic004G290600--Sobic003G093100 Sobic004G290600--Sobic007G131000 Sobic005G114201 Sobic005G114201 Sobic004G290600--Sobic005G114201 Sobic001G337100 Sobic001G337100 Sobic004G290600--Sobic001G337100 Sobic010G188500 Sobic010G188500 Sobic004G290600--Sobic010G188500 Sobic009G061500--Sobic009G061601 Sobic009G061500--Sobic008G136601 Sobic009G061500--Sobic003G297100 Sobic009G061500--Sobic001G340800 Sobic009G061500--Sobic008G020800 Sobic009G061500--Sobic005G114201 Sobic008G148600 Sobic008G148600 Sobic009G061500--Sobic008G148600 Sobic009G061500--Sobic001G370400 Sobic007G095333 Sobic007G095333 Sobic009G061500--Sobic007G095333 Sobic005G176700 Sobic005G176700 Sobic008G020800--Sobic005G176700 Sobic001G167300 Sobic001G167300 Sobic008G020800--Sobic001G167300 Sobic005G006100 Sobic005G006100 Sobic008G020800--Sobic005G006100 Sobic007G122600 Sobic007G122600 Sobic008G020800--Sobic007G122600 Sobic006G070032 Sobic006G070032 Sobic008G020800--Sobic006G070032 Sobic008G020800--Sobic007G215200 Sobic002G194201 Sobic002G194201 Sobic008G020800--Sobic002G194201 Sobic008G020800--Sobic010G207800 Sobic008G020800--Sobic002G015900 Sobic001G294500--Sobic007G131000 Sobic004G177900 Sobic004G177900 Sobic001G294500--Sobic004G177900 Sobic001G294500--Sobic003G151400 Sobic001G294500--Sobic005G043300 Sobic003G246500 Sobic003G246500 Sobic001G294500--Sobic003G246500 Sobic008G025400 Sobic008G025400 Sobic001G294500--Sobic008G025400 Sobic001G294500--Sobic003G093100 Sobic001G294500--Sobic005G204600 Sobic001G294500--Sobic009G061601 Sobic007G131000--Sobic003G246500 Sobic005G040700 Sobic005G040700 Sobic007G131000--Sobic005G040700 Sobic004G100900 Sobic004G100900 Sobic007G131000--Sobic004G100900 Sobic003G175950 Sobic003G175950 Sobic007G131000--Sobic003G175950 Sobic010G051000 Sobic010G051000 Sobic007G131000--Sobic010G051000 Sobic001G332000 Sobic001G332000 Sobic007G131000--Sobic001G332000 Sobic001G329200 Sobic001G329200 Sobic007G131000--Sobic001G329200 Sobic001G269100 Sobic001G269100 Sobic007G131000--Sobic001G269100 Sobic001G171300 Sobic001G171300 Sobic007G131000--Sobic001G171300 Sobic003G093100--Sobic008G025400 Sobic003G093100--Sobic001G294500 Sobic003G093100--Sobic003G151400 Sobic002G088600 Sobic002G088600 Sobic003G093100--Sobic002G088600 Sobic003G093100--Sobic004G177900 Sobic003G093100--Sobic007G131000 Sobic003G093100--Sobic003G246500 Sobic003G164400 Sobic003G164400 Sobic003G093100--Sobic003G164400 Sobic003G093100--Sobic009G061601
Octagon: transcription factors


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