Gene annotation
Transcriptome id Sobic.003G133000.2,Sobic.003G133000.1
Synonym Sb03g011330, ZIF1
Functional annotation major facilitator superfamily antiporter, putative, expressed
UniProt A0A1B6Q335 , A0A1B6Q2W8
Pfam PF07690 PF00083
Panther DB PTHR23504 PTHR23504:SF21
NCBI CDD KOG2615; Permease of the major facilitator superfamily
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G13750 : zinc induced facilitator-like 1
RAP-DB (Rice) LOC_Os01g17214.1 : major facilitator superfamily antiporter, putative, expressed
MaizeGDB (Corn) Zm00025a035195 , Zm00025a005418
Brachypodium -
Barley HORVU3Hr1G043300.22 , HORVU3Hr1G043300.23 , HORVU3Hr1G043300.20 , HORVU3Hr1G043300.21 , HORVU3Hr1G043300.17 , HORVU3Hr1G043300.16 , HORVU3Hr1G043300.15 , HORVU3Hr1G043300.14 , HORVU3Hr1G043300.13 , HORVU3Hr1G043300.12 , HORVU3Hr1G043300.11 , HORVU3Hr1G043300.10 , HORVU3Hr1G043300.19 , HORVU3Hr1G043300.18 , HORVU3Hr1G043300.9 , HORVU3Hr1G043300.8 , HORVU3Hr1G043300.7 , HORVU3Hr1G043300.6 , HORVU3Hr1G043300.5 , HORVU3Hr1G043300.4 , HORVU3Hr1G043300.3 , HORVU3Hr1G043300.2 , HORVU3Hr1G043300.1
Wheat TraesCS3B02G220000 , TraesCS3B02G220000 , TraesCS3B02G220000 , TraesCS3D02G194600 , TraesCS3A02G191000 , TraesCS5B02G542900 , TraesCS5B02G542900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G090200 OsMADS63 - MADS-box family gene with MIKC , type-box, expressed -
2 Sobic.001G261416 - K01858: INO1, myo-inositol-1-phosphate synthase
3 Sobic.001G171300 UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
4 Sobic.001G165700 B3 DNA binding domain containing protein, expressed -
5 Sobic.001G329200 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
6 Sobic.001G287400 VQ domain containing protein, putative, expressed -
7 Sobic.010G215000 fasciclin-like arabinogalactan precursor protein, putative, expressed -
8 Sobic.003G175950 - -
9 Sobic.007G014000 OsFBX142 - F-box domain containing protein, expressed -
10 Sobic.001G269100 lysosomal alpha-mannosidase precursor, putative, expressed -
11 Sobic.010G216100 leaf senescence related protein, putative, expressed -
12 Sobic.001G332000 pollen allergen, putative, expressed -
13 Sobic.003G351100 - -
14 Sobic.010G240300 Os12bglu38 - beta-glucosidase/beta-mannosidase/exoglucanase homologue, expressed K05350: beta-glucosidase
15 Sobic.001G130500 - -
16 Sobic.007G145500 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
17 Sobic.005G040700 amino acid permease family protein, putative, expressed -
18 Sobic.007G160501 - -
19 Sobic.006G005300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
20 Sobic.002G194300 expressed protein -


Gene co-expression network
sample Sobic003G133000 Sobic003G133000 Sobic010G090200 Sobic010G090200 Sobic003G133000--Sobic010G090200 Sobic001G261416 Sobic001G261416 Sobic003G133000--Sobic001G261416 Sobic001G171300 Sobic001G171300 Sobic003G133000--Sobic001G171300 Sobic001G165700 Sobic001G165700 Sobic003G133000--Sobic001G165700 Sobic001G329200 Sobic001G329200 Sobic003G133000--Sobic001G329200 Sobic001G287400 Sobic001G287400 Sobic003G133000--Sobic001G287400 Sobic010G215000 Sobic010G215000 Sobic003G133000--Sobic010G215000 Sobic003G175950 Sobic003G175950 Sobic003G133000--Sobic003G175950 Sobic007G014000 Sobic007G014000 Sobic003G133000--Sobic007G014000 Sobic010G090200--Sobic001G261416 Sobic010G090200--Sobic007G014000 Sobic010G240300 Sobic010G240300 Sobic010G090200--Sobic010G240300 Sobic010G216100 Sobic010G216100 Sobic010G090200--Sobic010G216100 Sobic010G090200--Sobic001G171300 Sobic010G207800 Sobic010G207800 Sobic010G090200--Sobic010G207800 Sobic010G090200--Sobic010G215000 Sobic010G090200--Sobic001G287400 Sobic005G006400 Sobic005G006400 Sobic010G090200--Sobic005G006400 Sobic001G261416--Sobic010G090200 Sobic001G261416--Sobic001G171300 Sobic001G261416--Sobic001G287400 Sobic001G261416--Sobic001G329200 Sobic001G261416--Sobic007G014000 Sobic001G261416--Sobic001G165700 Sobic001G261416--Sobic010G216100 Sobic001G261416--Sobic010G207800 Sobic001G261416--Sobic010G215000 Sobic001G171300--Sobic001G165700 Sobic001G171300--Sobic001G329200 Sobic001G171300--Sobic001G287400 Sobic001G171300--Sobic001G261416 Sobic001G171300--Sobic003G175950 Sobic001G130500 Sobic001G130500 Sobic001G171300--Sobic001G130500 Sobic001G171300--Sobic010G215000 Sobic007G145500 Sobic007G145500 Sobic001G171300--Sobic007G145500 Sobic001G332000 Sobic001G332000 Sobic001G171300--Sobic001G332000 Sobic001G165700--Sobic001G171300 Sobic001G165700--Sobic010G215000 Sobic001G165700--Sobic003G175950 Sobic001G165700--Sobic001G329200 Sobic003G445300 Sobic003G445300 Sobic001G165700--Sobic003G445300 Sobic001G165700--Sobic001G287400 Sobic001G165700--Sobic001G261416 Sobic001G165700--Sobic007G145500 Sobic005G220400 Sobic005G220400 Sobic001G165700--Sobic005G220400 Sobic001G329200--Sobic003G175950 Sobic001G329200--Sobic001G332000 Sobic001G329200--Sobic001G287400 Sobic001G329200--Sobic001G171300 Sobic001G329200--Sobic001G130500 Sobic005G040700 Sobic005G040700 Sobic001G329200--Sobic005G040700 Sobic001G329200--Sobic001G261416 Sobic001G329200--Sobic001G165700 Sobic001G269100 Sobic001G269100 Sobic001G329200--Sobic001G269100 Sobic001G287400--Sobic001G329200 Sobic001G287400--Sobic001G171300 Sobic001G287400--Sobic003G175950 Sobic001G287400--Sobic001G332000 Sobic001G287400--Sobic001G261416 Sobic001G287400--Sobic001G130500 Sobic001G287400--Sobic001G165700 Sobic001G287400--Sobic005G040700 Sobic001G287400--Sobic001G269100 Sobic002G194300 Sobic002G194300 Sobic010G215000--Sobic002G194300 Sobic010G215000--Sobic001G165700 Sobic007G160501 Sobic007G160501 Sobic010G215000--Sobic007G160501 Sobic003G351100 Sobic003G351100 Sobic010G215000--Sobic003G351100 Sobic010G215000--Sobic005G220400 Sobic010G215000--Sobic001G171300 Sobic010G215000--Sobic003G445300 Sobic007G095333 Sobic007G095333 Sobic010G215000--Sobic007G095333 Sobic010G215000--Sobic001G261416 Sobic003G175950--Sobic001G329200 Sobic003G175950--Sobic001G130500 Sobic003G175950--Sobic001G332000 Sobic003G175950--Sobic005G040700 Sobic003G175950--Sobic001G171300 Sobic003G175950--Sobic001G287400 Sobic003G175950--Sobic001G269100 Sobic010G051000 Sobic010G051000 Sobic003G175950--Sobic010G051000 Sobic003G175950--Sobic001G165700 Sobic007G014000--Sobic010G090200 Sobic007G014000--Sobic010G240300 Sobic007G014000--Sobic010G216100 Sobic007G014000--Sobic001G261416 Sobic007G014000--Sobic010G207800 Sobic007G014000--Sobic005G006400 Sobic008G086500 Sobic008G086500 Sobic007G014000--Sobic008G086500 Sobic007G035200 Sobic007G035200 Sobic007G014000--Sobic007G035200 Sobic005G006100 Sobic005G006100 Sobic007G014000--Sobic005G006100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.