Gene annotation
Transcriptome id Sobic.008G136601.2,Sobic.008G136601.1
Synonym -
Functional annotation -
UniProt A0A1Z5R7P4 , A0A1Z5R6N9
Pfam PF09174
Panther DB PTHR22504
NCBI CDD KOG3104; Mod5 protein sorting/negative effector of RNA Pol III synthesis
KEGG Orthology -
Gene Ontology GO:0016480; negative regulation of transcription by RNA polymerase III


Orthologs (automatic annotation)
TAIR AT5G13240 : transcription regulators
RAP-DB (Rice) LOC_Os04g56730.2 : repressor of RNA polymerase III transcription MAF1, putative, expressed
MaizeGDB (Corn) Zm00025a021296
Brachypodium KQK20418 , PNT76842 , PNT76841 , KQK20417 , KQK20419
Barley HORVU3Hr1G010030.9 , HORVU3Hr1G010030.4 , HORVU3Hr1G010030.1 , HORVU3Hr1G010030.3 , HORVU3Hr1G010030.2 , HORVU3Hr1G010030.5 , HORVU3Hr1G010030.10 , HORVU3Hr1G010030.7 , HORVU3Hr1G010030.6
Wheat TraesCS3A02G053700 , TraesCS3A02G053700 , TraesCS3A02G053700 , TraesCS3B02G064600 , TraesCS3B02G064600 , TraesCS3B02G064600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G001100 ELMO/CED-12 family protein, putative, expressed -
2 Sobic.006G269101 - -
3 Sobic.009G061601 - -
4 Sobic.001G212500 vacuolar protein sorting-associated protein 52, putative, expressed -
5 Sobic.005G043300 - -
6 Sobic.001G165700 B3 DNA binding domain containing protein, expressed -
7 Sobic.002G126400 - -
8 Sobic.007G131000 dynamin-2B, putative, expressed K01528: dynamin 1/3
9 Sobic.003G445300 aquaporin protein, putative, expressed K09873: aquaporin TIP
10 Sobic.005G220400 pollen allergen, putative, expressed -
11 Sobic.010G215000 fasciclin-like arabinogalactan precursor protein, putative, expressed -
12 Sobic.002G082400 DUF567 domain containing protein, putative, expressed -
13 Sobic.001G171300 UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
14 Sobic.001G269100 lysosomal alpha-mannosidase precursor, putative, expressed -
15 Sobic.005G220500 pollen allergen, putative, expressed -
16 Sobic.002G414000 - -
17 Sobic.001G294500 phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplast precursor, putative, expressed K01626: E2.5.1.54, aroF, aroG, 3-deoxy-7-phosphoheptulonate synthase
18 Sobic.001G246001 - K10523: speckle-type POZ protein
19 Sobic.005G214800 - -
20 Sobic.001G269200 "GDSL-like lipase/acylhydrolase, is the most likely gene associated with epicuticular wax deposition."(PubMedID : 28702690)@GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic008G136601 Sobic008G136601 Sobic006G001100 Sobic006G001100 Sobic008G136601--Sobic006G001100 Sobic006G269101 Sobic006G269101 Sobic008G136601--Sobic006G269101 Sobic009G061601 Sobic009G061601 Sobic008G136601--Sobic009G061601 Sobic001G212500 Sobic001G212500 Sobic008G136601--Sobic001G212500 Sobic005G043300 Sobic005G043300 Sobic008G136601--Sobic005G043300 Sobic001G165700 Sobic001G165700 Sobic008G136601--Sobic001G165700 Sobic002G126400 Sobic002G126400 Sobic008G136601--Sobic002G126400 Sobic007G131000 Sobic007G131000 Sobic008G136601--Sobic007G131000 Sobic003G445300 Sobic003G445300 Sobic008G136601--Sobic003G445300 Sobic006G001100--Sobic008G136601 Sobic007G176900 Sobic007G176900 Sobic006G001100--Sobic007G176900 Sobic006G027601 Sobic006G027601 Sobic006G001100--Sobic006G027601 Sobic003G333100 Sobic003G333100 Sobic006G001100--Sobic003G333100 Sobic006G001100--Sobic009G061601 Sobic006G205400 Sobic006G205400 Sobic006G001100--Sobic006G205400 Sobic002G295800 Sobic002G295800 Sobic006G001100--Sobic002G295800 Sobic003G175000 Sobic003G175000 Sobic006G001100--Sobic003G175000 Sobic002G254700 Sobic002G254700 Sobic006G001100--Sobic002G254700 Sobic008G148600 Sobic008G148600 Sobic006G269101--Sobic008G148600 Sobic007G160501 Sobic007G160501 Sobic006G269101--Sobic007G160501 Sobic003G351100 Sobic003G351100 Sobic006G269101--Sobic003G351100 Sobic001G246001 Sobic001G246001 Sobic006G269101--Sobic001G246001 Sobic005G214800 Sobic005G214800 Sobic006G269101--Sobic005G214800 Sobic002G194300 Sobic002G194300 Sobic006G269101--Sobic002G194300 Sobic009G110800 Sobic009G110800 Sobic006G269101--Sobic009G110800 Sobic008G125801 Sobic008G125801 Sobic006G269101--Sobic008G125801 Sobic006G269101--Sobic002G126400 Sobic009G061601--Sobic007G131000 Sobic007G215200 Sobic007G215200 Sobic009G061601--Sobic007G215200 Sobic001G294500 Sobic001G294500 Sobic009G061601--Sobic001G294500 Sobic003G151400 Sobic003G151400 Sobic009G061601--Sobic003G151400 Sobic009G061601--Sobic006G205400 Sobic005G204600 Sobic005G204600 Sobic009G061601--Sobic005G204600 Sobic001G063300 Sobic001G063300 Sobic009G061601--Sobic001G063300 Sobic010G207800 Sobic010G207800 Sobic009G061601--Sobic010G207800 Sobic001G261416 Sobic001G261416 Sobic009G061601--Sobic001G261416 Sobic004G100900 Sobic004G100900 Sobic001G212500--Sobic004G100900 Sobic005G040700 Sobic005G040700 Sobic001G212500--Sobic005G040700 Sobic003G175950 Sobic003G175950 Sobic001G212500--Sobic003G175950 Sobic001G329200 Sobic001G329200 Sobic001G212500--Sobic001G329200 Sobic001G332000 Sobic001G332000 Sobic001G212500--Sobic001G332000 Sobic001G269100 Sobic001G269100 Sobic001G212500--Sobic001G269100 Sobic010G051000 Sobic010G051000 Sobic001G212500--Sobic010G051000 Sobic001G130500 Sobic001G130500 Sobic001G212500--Sobic001G130500 Sobic001G287400 Sobic001G287400 Sobic001G212500--Sobic001G287400 Sobic005G043300--Sobic007G160501 Sobic005G043300--Sobic001G246001 Sobic005G043300--Sobic005G214800 Sobic005G043300--Sobic003G445300 Sobic002G414000 Sobic002G414000 Sobic005G043300--Sobic002G414000 Sobic005G043300--Sobic003G351100 Sobic005G043300--Sobic009G110800 Sobic010G215000 Sobic010G215000 Sobic005G043300--Sobic010G215000 Sobic005G043300--Sobic008G125801 Sobic001G171300 Sobic001G171300 Sobic001G165700--Sobic001G171300 Sobic001G165700--Sobic010G215000 Sobic001G165700--Sobic003G175950 Sobic001G165700--Sobic001G329200 Sobic001G165700--Sobic003G445300 Sobic001G165700--Sobic001G287400 Sobic001G165700--Sobic001G261416 Sobic007G145500 Sobic007G145500 Sobic001G165700--Sobic007G145500 Sobic005G220400 Sobic005G220400 Sobic001G165700--Sobic005G220400 Sobic007G222100 Sobic007G222100 Sobic002G126400--Sobic007G222100 Sobic002G126400--Sobic010G051000 Sobic002G126400--Sobic001G269100 Sobic009G203900 Sobic009G203900 Sobic002G126400--Sobic009G203900 Sobic001G306500 Sobic001G306500 Sobic002G126400--Sobic001G306500 Sobic001G024900 Sobic001G024900 Sobic002G126400--Sobic001G024900 Sobic002G126400--Sobic005G040700 Sobic002G126400--Sobic003G175950 Sobic002G126400--Sobic001G130500 Sobic003G246500 Sobic003G246500 Sobic007G131000--Sobic003G246500 Sobic007G131000--Sobic005G040700 Sobic007G131000--Sobic004G100900 Sobic007G131000--Sobic003G175950 Sobic007G131000--Sobic010G051000 Sobic007G131000--Sobic001G332000 Sobic007G131000--Sobic001G329200 Sobic007G131000--Sobic001G269100 Sobic007G131000--Sobic001G171300 Sobic003G445300--Sobic005G220400 Sobic002G082400 Sobic002G082400 Sobic003G445300--Sobic002G082400 Sobic005G220500 Sobic005G220500 Sobic003G445300--Sobic005G220500 Sobic003G445300--Sobic002G414000 Sobic001G269200 Sobic001G269200 Sobic003G445300--Sobic001G269200 Sobic006G043101 Sobic006G043101 Sobic003G445300--Sobic006G043101 Sobic003G445300--Sobic005G214800 Sobic003G445300--Sobic001G246001 Sobic003G445300--Sobic001G165700
Octagon: transcription factors


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