Gene annotation
Transcriptome id Sobic.006G001100.1
Synonym Sb06g000270
Functional annotation ELMO/CED-12 family protein, putative, expressed
UniProt C5YB79
Pfam PF04727
Panther DB PTHR12771 PTHR12771:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G03620 : ELMO/CED-12 family protein
RAP-DB (Rice) LOC_Os04g01150.1 : ELMO/CED-12 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a021197 , Zm00025a055528 , Zm00025a012178
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G001100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G136601 - -
2 Sobic.007G176900 beta-galactosidase precursor, putative, expressed -
3 Sobic.006G027601 - -
4 Sobic.003G333100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
5 Sobic.009G061601 - -
6 Sobic.006G205400 villin protein, putative, expressed -
7 Sobic.002G295800 STRUBBELIG-RECEPTOR FAMILY 5 precursor, putative, expressed -
8 Sobic.003G175000 respiratory burst oxidase, putative, expressed -
9 Sobic.002G254700 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
10 Sobic.007G131000 dynamin-2B, putative, expressed K01528: dynamin 1/3
11 Sobic.005G003700 - -
12 Sobic.001G093100 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
13 Sobic.001G212500 vacuolar protein sorting-associated protein 52, putative, expressed -
14 Sobic.010G252600 cyclin-related protein, putative, expressed -
15 Sobic.002G126400 - -
16 Sobic.007G051100 secretory carrier-associated membrane protein 5, putative, expressed -
17 Sobic.006G074150 - -
18 Sobic.009G207700 cell cycle control protein, putative, expressed -
19 Sobic.008G028000 pollen allergen, putative, expressed -
20 Sobic.003G400000 signal peptide peptidase-like 2B, putative, expressed -


Gene co-expression network
sample Sobic006G001100 Sobic006G001100 Sobic008G136601 Sobic008G136601 Sobic006G001100--Sobic008G136601 Sobic007G176900 Sobic007G176900 Sobic006G001100--Sobic007G176900 Sobic006G027601 Sobic006G027601 Sobic006G001100--Sobic006G027601 Sobic003G333100 Sobic003G333100 Sobic006G001100--Sobic003G333100 Sobic009G061601 Sobic009G061601 Sobic006G001100--Sobic009G061601 Sobic006G205400 Sobic006G205400 Sobic006G001100--Sobic006G205400 Sobic002G295800 Sobic002G295800 Sobic006G001100--Sobic002G295800 Sobic003G175000 Sobic003G175000 Sobic006G001100--Sobic003G175000 Sobic002G254700 Sobic002G254700 Sobic006G001100--Sobic002G254700 Sobic008G136601--Sobic006G001100 Sobic006G269101 Sobic006G269101 Sobic008G136601--Sobic006G269101 Sobic008G136601--Sobic009G061601 Sobic001G212500 Sobic001G212500 Sobic008G136601--Sobic001G212500 Sobic005G043300 Sobic005G043300 Sobic008G136601--Sobic005G043300 Sobic001G165700 Sobic001G165700 Sobic008G136601--Sobic001G165700 Sobic002G126400 Sobic002G126400 Sobic008G136601--Sobic002G126400 Sobic007G131000 Sobic007G131000 Sobic008G136601--Sobic007G131000 Sobic003G445300 Sobic003G445300 Sobic008G136601--Sobic003G445300 Sobic007G176900--Sobic006G205400 Sobic007G176900--Sobic003G333100 Sobic007G176900--Sobic001G212500 Sobic010G144700 Sobic010G144700 Sobic007G176900--Sobic010G144700 Sobic001G333700 Sobic001G333700 Sobic007G176900--Sobic001G333700 Sobic001G093100 Sobic001G093100 Sobic007G176900--Sobic001G093100 Sobic005G040700 Sobic005G040700 Sobic007G176900--Sobic005G040700 Sobic010G051000 Sobic010G051000 Sobic007G176900--Sobic010G051000 Sobic001G288400 Sobic001G288400 Sobic007G176900--Sobic001G288400 Sobic006G027601--Sobic003G175000 Sobic006G027601--Sobic003G333100 Sobic006G027601--Sobic002G254700 Sobic005G003700 Sobic005G003700 Sobic006G027601--Sobic005G003700 Sobic003G420500 Sobic003G420500 Sobic006G027601--Sobic003G420500 Sobic010G276100 Sobic010G276100 Sobic006G027601--Sobic010G276100 Sobic009G175400 Sobic009G175400 Sobic006G027601--Sobic009G175400 Sobic006G027601--Sobic002G126400 Sobic010G040400 Sobic010G040400 Sobic006G027601--Sobic010G040400 Sobic009G082900 Sobic009G082900 Sobic003G333100--Sobic009G082900 Sobic004G002800 Sobic004G002800 Sobic003G333100--Sobic004G002800 Sobic001G252900 Sobic001G252900 Sobic003G333100--Sobic001G252900 Sobic003G073540 Sobic003G073540 Sobic003G333100--Sobic003G073540 Sobic005G025600 Sobic005G025600 Sobic003G333100--Sobic005G025600 Sobic001G412900 Sobic001G412900 Sobic003G333100--Sobic001G412900 Sobic003G333100--Sobic010G144700 Sobic006G159000 Sobic006G159000 Sobic003G333100--Sobic006G159000 Sobic003G333100--Sobic001G093100 Sobic009G061601--Sobic007G131000 Sobic007G215200 Sobic007G215200 Sobic009G061601--Sobic007G215200 Sobic001G294500 Sobic001G294500 Sobic009G061601--Sobic001G294500 Sobic003G151400 Sobic003G151400 Sobic009G061601--Sobic003G151400 Sobic009G061601--Sobic006G205400 Sobic005G204600 Sobic005G204600 Sobic009G061601--Sobic005G204600 Sobic001G063300 Sobic001G063300 Sobic009G061601--Sobic001G063300 Sobic010G207800 Sobic010G207800 Sobic009G061601--Sobic010G207800 Sobic001G261416 Sobic001G261416 Sobic009G061601--Sobic001G261416 Sobic006G205400--Sobic001G212500 Sobic008G043200 Sobic008G043200 Sobic006G205400--Sobic008G043200 Sobic006G205400--Sobic002G254700 Sobic006G205400--Sobic009G175400 Sobic006G205400--Sobic001G063300 Sobic001G332000 Sobic001G332000 Sobic006G205400--Sobic001G332000 Sobic006G205400--Sobic010G276100 Sobic006G205400--Sobic007G215200 Sobic006G205400--Sobic010G040400 Sobic010G252600 Sobic010G252600 Sobic002G295800--Sobic010G252600 Sobic009G105100 Sobic009G105100 Sobic002G295800--Sobic009G105100 Sobic004G166100 Sobic004G166100 Sobic002G295800--Sobic004G166100 Sobic001G528700 Sobic001G528700 Sobic002G295800--Sobic001G528700 Sobic009G102700 Sobic009G102700 Sobic002G295800--Sobic009G102700 Sobic002G295800--Sobic003G333100 Sobic007G222500 Sobic007G222500 Sobic002G295800--Sobic007G222500 Sobic007G222400 Sobic007G222400 Sobic002G295800--Sobic007G222400 Sobic001G539700 Sobic001G539700 Sobic002G295800--Sobic001G539700 Sobic003G175000--Sobic002G254700 Sobic003G175000--Sobic001G528700 Sobic003G175000--Sobic009G102700 Sobic003G175000--Sobic007G222500 Sobic003G175000--Sobic004G166100 Sobic003G175000--Sobic001G252900 Sobic001G348600 Sobic001G348600 Sobic003G175000--Sobic001G348600 Sobic003G175000--Sobic010G252600 Sobic007G057600 Sobic007G057600 Sobic003G175000--Sobic007G057600 Sobic002G254700--Sobic009G175400 Sobic002G254700--Sobic009G082900 Sobic002G254700--Sobic010G276100 Sobic002G254700--Sobic010G144700 Sobic002G254700--Sobic001G252900 Sobic002G254700--Sobic004G002800 Sobic002G254700--Sobic003G073540 Sobic002G254700--Sobic010G252600 Sobic002G254700--Sobic001G528700
Octagon: transcription factors


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