Gene annotation
Transcriptome id Sobic.007G051100.1
Synonym Sb07g004140, SC3
Functional annotation secretory carrier-associated membrane protein 5, putative, expressed
UniProt C5YHE1
Pfam PF04144
Panther DB PTHR10687 PTHR10687:SF15
NCBI CDD KOG3088; Secretory carrier membrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015031protein transport


Orthologs (automatic annotation)
TAIR AT1G32050 : SCAMP family protein
RAP-DB (Rice) LOC_Os08g06440.1 : secretory carrier-associated membrane protein 5, putative, expressed
MaizeGDB (Corn) Zm00025a030051
Brachypodium KQJ95288
Barley -
Wheat TraesCS7D02G294000 , TraesCS7B02G188800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G229801 - -
2 Sobic.003G164700 C2 domain containing protein, putative, expressed -
3 Sobic.008G119501 - -
4 Sobic.006G282000 cytochrome c, putative, expressed K08738: cytochrome c
5 Sobic.001G228000 universal stress protein domain containing protein, putative, expressed -
6 Sobic.007G175800 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
7 Sobic.003G317600 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
8 Sobic.002G150400 harpin-induced protein 1 domain containing protein, expressed -
9 Sobic.001G024800 uncharacterized Cys-rich domain containing protein, putative, expressed -
10 Sobic.006G171500 ZOS4-09 - C2H2 zinc finger protein, expressed -
11 Sobic.001G348600 patatin, putative, expressed -
12 Sobic.006G237700 expressed protein -
13 Sobic.001G452500 MA3 domain-containing protein("PubMedID : 26759170,PubMedID : 24597475")@MA3 domain containing protein, expressed -
14 Sobic.004G029032 - -
15 Sobic.001G002200 myosin, putative, expressed K10357: myosin V
16 Sobic.008G028200 pollen allergen, putative, expressed -
17 Sobic.003G400000 signal peptide peptidase-like 2B, putative, expressed -
18 Sobic.002G066300 expressed protein -
19 Sobic.002G197900 - -
20 Sobic.002G303500 actin-depolymerizing factor, putative, expressed K05765: cofilin


Gene co-expression network
sample Sobic007G051100 Sobic007G051100 Sobic010G229801 Sobic010G229801 Sobic007G051100--Sobic010G229801 Sobic003G164700 Sobic003G164700 Sobic007G051100--Sobic003G164700 Sobic008G119501 Sobic008G119501 Sobic007G051100--Sobic008G119501 Sobic006G282000 Sobic006G282000 Sobic007G051100--Sobic006G282000 Sobic001G228000 Sobic001G228000 Sobic007G051100--Sobic001G228000 Sobic007G175800 Sobic007G175800 Sobic007G051100--Sobic007G175800 Sobic003G317600 Sobic003G317600 Sobic007G051100--Sobic003G317600 Sobic002G150400 Sobic002G150400 Sobic007G051100--Sobic002G150400 Sobic001G024800 Sobic001G024800 Sobic007G051100--Sobic001G024800 Sobic006G171500 Sobic006G171500 Sobic010G229801--Sobic006G171500 Sobic010G229801--Sobic008G119501 Sobic010G229801--Sobic002G150400 Sobic001G348600 Sobic001G348600 Sobic010G229801--Sobic001G348600 Sobic010G229801--Sobic001G024800 Sobic010G229801--Sobic006G282000 Sobic004G029032 Sobic004G029032 Sobic010G229801--Sobic004G029032 Sobic010G229801--Sobic001G228000 Sobic008G028200 Sobic008G028200 Sobic010G229801--Sobic008G028200 Sobic003G164700--Sobic001G228000 Sobic002G197900 Sobic002G197900 Sobic003G164700--Sobic002G197900 Sobic004G294200 Sobic004G294200 Sobic003G164700--Sobic004G294200 Sobic001G240900 Sobic001G240900 Sobic003G164700--Sobic001G240900 Sobic006G237700 Sobic006G237700 Sobic003G164700--Sobic006G237700 Sobic003G164700--Sobic008G119501 Sobic001G002200 Sobic001G002200 Sobic003G164700--Sobic001G002200 Sobic003G164700--Sobic003G317600 Sobic003G164700--Sobic010G229801 Sobic008G119501--Sobic006G282000 Sobic002G066300 Sobic002G066300 Sobic008G119501--Sobic002G066300 Sobic001G097000 Sobic001G097000 Sobic008G119501--Sobic001G097000 Sobic008G119501--Sobic001G024800 Sobic004G242600 Sobic004G242600 Sobic008G119501--Sobic004G242600 Sobic002G303500 Sobic002G303500 Sobic008G119501--Sobic002G303500 Sobic003G400000 Sobic003G400000 Sobic008G119501--Sobic003G400000 Sobic005G023700 Sobic005G023700 Sobic008G119501--Sobic005G023700 Sobic008G119501--Sobic004G029032 Sobic006G282000--Sobic008G119501 Sobic006G282000--Sobic001G097000 Sobic006G282000--Sobic002G066300 Sobic006G282000--Sobic002G303500 Sobic006G282000--Sobic004G242600 Sobic006G282000--Sobic005G023700 Sobic009G091600 Sobic009G091600 Sobic006G282000--Sobic009G091600 Sobic006G282000--Sobic001G024800 Sobic006G282000--Sobic003G400000 Sobic001G228000--Sobic001G002200 Sobic001G228000--Sobic001G348600 Sobic001G228000--Sobic003G164700 Sobic001G228000--Sobic002G197900 Sobic002G140500 Sobic002G140500 Sobic001G228000--Sobic002G140500 Sobic008G027800 Sobic008G027800 Sobic001G228000--Sobic008G027800 Sobic007G057600 Sobic007G057600 Sobic001G228000--Sobic007G057600 Sobic008G028300 Sobic008G028300 Sobic001G228000--Sobic008G028300 Sobic004G024000 Sobic004G024000 Sobic001G228000--Sobic004G024000 Sobic003G335200 Sobic003G335200 Sobic007G175800--Sobic003G335200 Sobic007G175800--Sobic001G348600 Sobic007G222500 Sobic007G222500 Sobic007G175800--Sobic007G222500 Sobic007G175800--Sobic007G057600 Sobic007G175800--Sobic001G228000 Sobic007G175800--Sobic003G317600 Sobic004G002800 Sobic004G002800 Sobic007G175800--Sobic004G002800 Sobic001G252900 Sobic001G252900 Sobic007G175800--Sobic001G252900 Sobic007G175800--Sobic002G197900 Sobic003G317600--Sobic007G175800 Sobic003G317600--Sobic006G282000 Sobic003G317600--Sobic008G119501 Sobic003G317600--Sobic003G164700 Sobic003G317600--Sobic010G229801 Sobic003G317600--Sobic003G335200 Sobic003G317600--Sobic001G228000 Sobic003G317600--Sobic001G348600 Sobic003G317600--Sobic001G024800 Sobic002G150400--Sobic008G028200 Sobic002G150400--Sobic006G171500 Sobic002G150400--Sobic004G029032 Sobic002G150400--Sobic001G024800 Sobic002G150400--Sobic001G348600 Sobic002G150400--Sobic001G002200 Sobic002G150400--Sobic003G400000 Sobic002G150400--Sobic008G027800 Sobic002G150400--Sobic001G228000 Sobic001G024800--Sobic002G150400 Sobic001G024800--Sobic008G119501 Sobic001G024800--Sobic004G029032 Sobic001G024800--Sobic003G400000 Sobic001G024800--Sobic006G171500 Sobic001G024800--Sobic006G282000 Sobic001G024800--Sobic002G066300 Sobic001G024800--Sobic001G348600 Sobic001G024800--Sobic009G091600
Octagon: transcription factors


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