Gene annotation
Transcriptome id Sobic.008G159701.1
Synonym -
Functional annotation -
UniProt C6JSH2 , A0A1Z5R837 , A0A109ND65
Pfam PF05879
Panther DB PTHR11649 PTHR11649:SF64
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45160 : Root hair defective 3 GTP-binding protein (RHD3)
RAP-DB (Rice) LOC_Os12g41170.1 : SEY1, putative, expressed
MaizeGDB (Corn) Zm00025a025302 , Zm00025a045159 , Zm00025a004605
Brachypodium PNT62369 , KQJ85919
Barley HORVU5Hr1G013480.45 , HORVU5Hr1G013480.46 , HORVU5Hr1G013480.40 , HORVU5Hr1G013480.41 , HORVU5Hr1G013480.42 , HORVU5Hr1G013480.17 , HORVU5Hr1G013480.14 , HORVU5Hr1G013480.22 , HORVU5Hr1G013480.3 , HORVU5Hr1G013480.2 , HORVU5Hr1G013480.1 , HORVU5Hr1G013480.7 , HORVU5Hr1G013480.6 , HORVU5Hr1G013480.5 , HORVU5Hr1G013480.4 , HORVU5Hr1G013480.9 , HORVU5Hr1G013480.8 , HORVU5Hr1G013480.35 , HORVU5Hr1G013480.34 , HORVU5Hr1G013480.37 , HORVU5Hr1G013480.36 , HORVU5Hr1G013480.31 , HORVU5Hr1G013480.30 , HORVU5Hr1G013480.33 , HORVU5Hr1G013480.32 , HORVU5Hr1G013480.39 , HORVU5Hr1G013480.38 , HORVU5Hr1G013480.28 , HORVU5Hr1G013480.29 , HORVU5Hr1G013480.23 , HORVU5Hr1G013480.20 , HORVU5Hr1G013480.21 , HORVU5Hr1G013480.26 , HORVU5Hr1G013480.27 , HORVU5Hr1G013480.24 , HORVU5Hr1G013480.25 , HORVU5Hr1G013480.13 , HORVU5Hr1G013480.12 , HORVU5Hr1G013480.11 , HORVU5Hr1G013480.10 , HORVU5Hr1G013480.16 , HORVU5Hr1G013480.15 , HORVU5Hr1G013480.19 , HORVU5Hr1G013480.18
Wheat TraesCS5A02G055000 , TraesCS5D02G066300 , TraesCS5B02G061500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G290600 beige/BEACH domain containing protein, expressed -
2 Sobic.006G205400 villin protein, putative, expressed -
3 Sobic.005G003700 - -
4 Sobic.002G254700 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
5 Sobic.003G333100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
6 Sobic.003G151400 protein kinase, putative, expressed K13436: pto-interacting protein 1
7 Sobic.010G001200 CCT/B-box zinc finger protein, putative, expressed -
8 Sobic.009G061601 - -
9 Sobic.007G091400 diacylglycerol kinase catalytic domain family protein, expressed K00901: dgkA, diacylglycerol kinase (ATP)
10 Sobic.009G105100 expressed protein -
11 Sobic.006G001100 ELMO/CED-12 family protein, putative, expressed -
12 Sobic.004G273600 RNA recognition motif containing protein, putative, expressed -
13 Sobic.003G420500 Ca ATPase 3(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
14 Sobic.002G279900 beta-galactosidase precursor, putative, expressed -
15 Sobic.005G092100 - -
16 Sobic.003G093100 cyclin-related protein, putative, expressed -
17 Sobic.006G032000 - -
18 Sobic.005G145400 RNA recognition motif containing protein, putative, expressed -
19 Sobic.002G125100 - -
20 Sobic.001G109900 expressed protein -


Gene co-expression network
sample Sobic008G159701 Sobic008G159701 Sobic004G290600 Sobic004G290600 Sobic008G159701--Sobic004G290600 Sobic006G205400 Sobic006G205400 Sobic008G159701--Sobic006G205400 Sobic005G003700 Sobic005G003700 Sobic008G159701--Sobic005G003700 Sobic002G254700 Sobic002G254700 Sobic008G159701--Sobic002G254700 Sobic003G333100 Sobic003G333100 Sobic008G159701--Sobic003G333100 Sobic003G151400 Sobic003G151400 Sobic008G159701--Sobic003G151400 Sobic010G001200 Sobic010G001200 Sobic008G159701--Sobic010G001200 Sobic009G061601 Sobic009G061601 Sobic008G159701--Sobic009G061601 Sobic007G091400 Sobic007G091400 Sobic008G159701--Sobic007G091400 Sobic001G294500 Sobic001G294500 Sobic004G290600--Sobic001G294500 Sobic004G290600--Sobic009G061601 Sobic004G290600--Sobic006G205400 Sobic002G106600 Sobic002G106600 Sobic004G290600--Sobic002G106600 Sobic003G093100 Sobic003G093100 Sobic004G290600--Sobic003G093100 Sobic007G131000 Sobic007G131000 Sobic004G290600--Sobic007G131000 Sobic005G114201 Sobic005G114201 Sobic004G290600--Sobic005G114201 Sobic001G337100 Sobic001G337100 Sobic004G290600--Sobic001G337100 Sobic010G188500 Sobic010G188500 Sobic004G290600--Sobic010G188500 Sobic001G212500 Sobic001G212500 Sobic006G205400--Sobic001G212500 Sobic008G043200 Sobic008G043200 Sobic006G205400--Sobic008G043200 Sobic006G205400--Sobic002G254700 Sobic009G175400 Sobic009G175400 Sobic006G205400--Sobic009G175400 Sobic001G063300 Sobic001G063300 Sobic006G205400--Sobic001G063300 Sobic001G332000 Sobic001G332000 Sobic006G205400--Sobic001G332000 Sobic010G276100 Sobic010G276100 Sobic006G205400--Sobic010G276100 Sobic007G215200 Sobic007G215200 Sobic006G205400--Sobic007G215200 Sobic010G040400 Sobic010G040400 Sobic006G205400--Sobic010G040400 Sobic005G003700--Sobic008G043200 Sobic001G089400 Sobic001G089400 Sobic005G003700--Sobic001G089400 Sobic005G003700--Sobic007G215200 Sobic003G420500 Sobic003G420500 Sobic005G003700--Sobic003G420500 Sobic010G207800 Sobic010G207800 Sobic005G003700--Sobic010G207800 Sobic005G003700--Sobic001G332000 Sobic005G003700--Sobic009G175400 Sobic005G003700--Sobic010G040400 Sobic004G192600 Sobic004G192600 Sobic005G003700--Sobic004G192600 Sobic002G254700--Sobic009G175400 Sobic009G082900 Sobic009G082900 Sobic002G254700--Sobic009G082900 Sobic002G254700--Sobic010G276100 Sobic010G144700 Sobic010G144700 Sobic002G254700--Sobic010G144700 Sobic001G252900 Sobic001G252900 Sobic002G254700--Sobic001G252900 Sobic004G002800 Sobic004G002800 Sobic002G254700--Sobic004G002800 Sobic003G073540 Sobic003G073540 Sobic002G254700--Sobic003G073540 Sobic010G252600 Sobic010G252600 Sobic002G254700--Sobic010G252600 Sobic001G528700 Sobic001G528700 Sobic002G254700--Sobic001G528700 Sobic003G333100--Sobic009G082900 Sobic003G333100--Sobic004G002800 Sobic003G333100--Sobic001G252900 Sobic003G333100--Sobic003G073540 Sobic005G025600 Sobic005G025600 Sobic003G333100--Sobic005G025600 Sobic001G412900 Sobic001G412900 Sobic003G333100--Sobic001G412900 Sobic003G333100--Sobic010G144700 Sobic006G159000 Sobic006G159000 Sobic003G333100--Sobic006G159000 Sobic001G093100 Sobic001G093100 Sobic003G333100--Sobic001G093100 Sobic003G151400--Sobic001G294500 Sobic001G109900 Sobic001G109900 Sobic003G151400--Sobic001G109900 Sobic003G151400--Sobic007G131000 Sobic003G151400--Sobic003G093100 Sobic003G151400--Sobic009G061601 Sobic008G025400 Sobic008G025400 Sobic003G151400--Sobic008G025400 Sobic003G151400--Sobic006G205400 Sobic005G092100 Sobic005G092100 Sobic003G151400--Sobic005G092100 Sobic003G151400--Sobic002G254700 Sobic001G135950 Sobic001G135950 Sobic010G001200--Sobic001G135950 Sobic002G279900 Sobic002G279900 Sobic010G001200--Sobic002G279900 Sobic004G099200 Sobic004G099200 Sobic010G001200--Sobic004G099200 Sobic004G071900 Sobic004G071900 Sobic010G001200--Sobic004G071900 Sobic002G125100 Sobic002G125100 Sobic010G001200--Sobic002G125100 Sobic001G525600 Sobic001G525600 Sobic010G001200--Sobic001G525600 Sobic005G145400 Sobic005G145400 Sobic010G001200--Sobic005G145400 Sobic006G215500 Sobic006G215500 Sobic010G001200--Sobic006G215500 Sobic010G001200--Sobic003G420500 Sobic009G061601--Sobic007G131000 Sobic009G061601--Sobic007G215200 Sobic009G061601--Sobic001G294500 Sobic009G061601--Sobic003G151400 Sobic009G061601--Sobic006G205400 Sobic005G204600 Sobic005G204600 Sobic009G061601--Sobic005G204600 Sobic009G061601--Sobic001G063300 Sobic009G061601--Sobic010G207800 Sobic001G261416 Sobic001G261416 Sobic009G061601--Sobic001G261416 Sobic004G070600 Sobic004G070600 Sobic007G091400--Sobic004G070600 Sobic009G102700 Sobic009G102700 Sobic007G091400--Sobic009G102700 Sobic007G091400--Sobic010G252600 Sobic007G091400--Sobic002G254700 Sobic007G091400--Sobic001G528700 Sobic002G295800 Sobic002G295800 Sobic007G091400--Sobic002G295800 Sobic001G452500 Sobic001G452500 Sobic007G091400--Sobic001G452500 Sobic009G105100 Sobic009G105100 Sobic007G091400--Sobic009G105100 Sobic006G026200 Sobic006G026200 Sobic007G091400--Sobic006G026200
Octagon: transcription factors


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