Gene annotation
Transcriptome id Sobic.001G073700.1
Synonym TUA6, Sb01g006650
Functional annotation tubulin/FtsZ domain containing protein, putative, expressed
UniProt C5WZ62
Pfam PF03953 PF00091
Panther DB PTHR11588 PTHR11588:SF101
NCBI CDD -
KEGG Orthology K07374; tubulin alpha
Gene Ontology GO:0003924; GTPase activity GO:0007017microtubule-based process GO:0005874microtubule


Orthologs (automatic annotation)
TAIR AT4G14960 : Tubulin/FtsZ family protein
RAP-DB (Rice) LOC_Os11g14220.1 : tubulin/FtsZ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a016899 , Zm00025a007962 , Zm00025a048479 , Zm00025a016682 , Zm00025a014972
Brachypodium KQK13442 , KQK12974 , KQK22854
Barley HORVU5Hr1G098960.5 , HORVU5Hr1G098960.4 , HORVU5Hr1G098960.7 , HORVU5Hr1G098960.6 , HORVU5Hr1G098960.1 , HORVU5Hr1G098960.3 , HORVU5Hr1G098960.2 , HORVU5Hr1G098960.9 , HORVU5Hr1G098960.8 , HORVU4Hr1G009520.6 , HORVU4Hr1G009520.7 , HORVU4Hr1G009520.4 , HORVU4Hr1G009520.5 , HORVU4Hr1G009520.2 , HORVU4Hr1G009520.3 , HORVU4Hr1G009520.1 , HORVU5Hr1G098960.11 , HORVU5Hr1G098960.10 , HORVU5Hr1G098960.13 , HORVU5Hr1G098960.12 , HORVU4Hr1G067370.4 , HORVU4Hr1G067370.3 , HORVU4Hr1G067370.2 , HORVU4Hr1G067370.1
Wheat TraesCS4A02G065700 , TraesCS4A02G257800 , TraesCS5A02G407800 , TraesCS5D02G417700 , TraesCS5B02G412700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
2 Sobic.002G362500 expressed protein -
3 Sobic.006G156400 double-stranded RNA binding motif containing protein, expressed K18998: RNA polymerase II C-terminal domain phosphatase-like 1/2
4 Sobic.001G322400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
5 Sobic.006G050100 expressed protein -
6 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
7 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
8 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
9 Sobic.008G141100 formin, putative, expressed -
10 Sobic.004G074900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
11 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
12 Sobic.009G202000 GATA zinc finger domain containing protein, expressed -
13 Sobic.009G106700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
14 Sobic.003G040700 choline/ethanolamine kinase, putative, expressed K14156: choline/ethanolamine kinase
15 Sobic.001G387300 exostosin family domain containing protein, expressed -
16 Sobic.004G062200 expressed protein -
17 Sobic.003G376900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed -
18 Sobic.002G299500 expressed protein -
19 Sobic.003G342500 methyltransferase, putative, expressed -
20 Sobic.010G058300 expressed protein -


Gene co-expression network
sample Sobic001G073700 Sobic001G073700 Sobic009G201000 Sobic009G201000 Sobic001G073700--Sobic009G201000 Sobic002G362500 Sobic002G362500 Sobic001G073700--Sobic002G362500 Sobic006G156400 Sobic006G156400 Sobic001G073700--Sobic006G156400 Sobic001G322400 Sobic001G322400 Sobic001G073700--Sobic001G322400 Sobic006G050100 Sobic006G050100 Sobic001G073700--Sobic006G050100 Sobic003G352900 Sobic003G352900 Sobic001G073700--Sobic003G352900 Sobic008G166100 Sobic008G166100 Sobic001G073700--Sobic008G166100 Sobic001G072000 Sobic001G072000 Sobic001G073700--Sobic001G072000 Sobic008G141100 Sobic008G141100 Sobic001G073700--Sobic008G141100 Sobic009G201000--Sobic003G352900 Sobic009G201000--Sobic008G166100 Sobic001G384200 Sobic001G384200 Sobic009G201000--Sobic001G384200 Sobic009G201000--Sobic002G362500 Sobic009G201000--Sobic001G072000 Sobic006G265800 Sobic006G265800 Sobic009G201000--Sobic006G265800 Sobic009G201000--Sobic001G322400 Sobic007G039200 Sobic007G039200 Sobic009G201000--Sobic007G039200 Sobic009G201000--Sobic006G156400 Sobic002G362500--Sobic001G322400 Sobic002G362500--Sobic001G072000 Sobic002G362500--Sobic009G201000 Sobic002G362500--Sobic008G166100 Sobic002G362500--Sobic007G039200 Sobic009G163100 Sobic009G163100 Sobic002G362500--Sobic009G163100 Sobic004G113600 Sobic004G113600 Sobic002G362500--Sobic004G113600 Sobic001G387300 Sobic001G387300 Sobic002G362500--Sobic001G387300 Sobic004G074900 Sobic004G074900 Sobic002G362500--Sobic004G074900 Sobic006G156400--Sobic009G201000 Sobic006G156400--Sobic008G141100 Sobic009G178400 Sobic009G178400 Sobic006G156400--Sobic009G178400 Sobic009G121200 Sobic009G121200 Sobic006G156400--Sobic009G121200 Sobic009G202000 Sobic009G202000 Sobic006G156400--Sobic009G202000 Sobic005G048500 Sobic005G048500 Sobic006G156400--Sobic005G048500 Sobic006G156400--Sobic001G387300 Sobic006G156400--Sobic001G073700 Sobic009G113500 Sobic009G113500 Sobic006G156400--Sobic009G113500 Sobic001G322400--Sobic001G072000 Sobic010G073900 Sobic010G073900 Sobic001G322400--Sobic010G073900 Sobic001G432200 Sobic001G432200 Sobic001G322400--Sobic001G432200 Sobic001G322400--Sobic008G166100 Sobic004G279200 Sobic004G279200 Sobic001G322400--Sobic004G279200 Sobic007G048101 Sobic007G048101 Sobic001G322400--Sobic007G048101 Sobic001G322400--Sobic009G202000 Sobic009G238650 Sobic009G238650 Sobic001G322400--Sobic009G238650 Sobic003G407700 Sobic003G407700 Sobic001G322400--Sobic003G407700 Sobic006G050100--Sobic001G073700 Sobic006G050100--Sobic002G362500 Sobic006G050100--Sobic001G322400 Sobic006G050100--Sobic008G141100 Sobic006G050100--Sobic006G156400 Sobic009G025700 Sobic009G025700 Sobic006G050100--Sobic009G025700 Sobic006G050100--Sobic001G072000 Sobic009G098700 Sobic009G098700 Sobic006G050100--Sobic009G098700 Sobic006G050100--Sobic010G073900 Sobic007G144100 Sobic007G144100 Sobic003G352900--Sobic007G144100 Sobic002G299500 Sobic002G299500 Sobic003G352900--Sobic002G299500 Sobic001G076600 Sobic001G076600 Sobic003G352900--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic003G352900--Sobic003G376900 Sobic003G352900--Sobic009G201000 Sobic005G045800 Sobic005G045800 Sobic003G352900--Sobic005G045800 Sobic003G352900--Sobic009G163100 Sobic001G385300 Sobic001G385300 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic008G166100--Sobic001G384200 Sobic008G166100--Sobic007G039200 Sobic008G166100--Sobic009G178400 Sobic008G166100--Sobic001G322400 Sobic003G024100 Sobic003G024100 Sobic008G166100--Sobic003G024100 Sobic008G166100--Sobic009G202000 Sobic001G340800 Sobic001G340800 Sobic008G166100--Sobic001G340800 Sobic008G166100--Sobic001G387300 Sobic008G166100--Sobic001G432200 Sobic001G072000--Sobic001G322400 Sobic005G050400 Sobic005G050400 Sobic001G072000--Sobic005G050400 Sobic001G112600 Sobic001G112600 Sobic001G072000--Sobic001G112600 Sobic001G072000--Sobic004G279200 Sobic008G156600 Sobic008G156600 Sobic001G072000--Sobic008G156600 Sobic001G072000--Sobic001G432200 Sobic001G072000--Sobic009G163100 Sobic009G242200 Sobic009G242200 Sobic001G072000--Sobic009G242200 Sobic004G038500 Sobic004G038500 Sobic001G072000--Sobic004G038500 Sobic009G106700 Sobic009G106700 Sobic008G141100--Sobic009G106700 Sobic006G239500 Sobic006G239500 Sobic008G141100--Sobic006G239500 Sobic002G199800 Sobic002G199800 Sobic008G141100--Sobic002G199800 Sobic008G141100--Sobic009G238650 Sobic008G141100--Sobic006G156400 Sobic004G349600 Sobic004G349600 Sobic008G141100--Sobic004G349600 Sobic005G120400 Sobic005G120400 Sobic008G141100--Sobic005G120400 Sobic008G141100--Sobic010G073900 Sobic008G141100--Sobic003G407700
Octagon: transcription factors


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