Gene annotation
Transcriptome id Sobic.003G040700.2
Synonym Sb03g003630
Functional annotation choline/ethanolamine kinase, putative, expressed
UniProt C5XMM9
Pfam PF01636
Panther DB PTHR22603 PTHR22603:SF42
NCBI CDD KOG2686; Choline kinase
KEGG Orthology K14156; choline/ethanolamine kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74320 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g08760.1 : choline/ethanolamine kinase, putative, expressed
MaizeGDB (Corn) Zm00025a049139 , Zm00025a035814
Brachypodium KQK03055 , PNT70098
Barley HORVU3Hr1G021080.5 , HORVU3Hr1G021080.6 , HORVU3Hr1G021080.2 , HORVU3Hr1G021080.3
Wheat TraesCS3B02G135000 , TraesCS3A02G115900
Populus -


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cDNA sequences
Sobic.003G040700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G362500 expressed protein -
2 Sobic.004G074900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
3 Sobic.007G138000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
4 Sobic.007G101600 - -
5 Sobic.004G062200 expressed protein -
6 Sobic.007G039200 MYB family transcription factor, putative, expressed -
7 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
9 Sobic.002G389600 transcription regulator, putative, expressed -
10 Sobic.006G045100 - -
11 Sobic.004G113600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
12 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
13 Sobic.001G322400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
14 Sobic.004G180100 - -
15 Sobic.001G387300 exostosin family domain containing protein, expressed -
16 Sobic.001G490950 - -
17 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
18 Sobic.003G349900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
19 Sobic.006G171600 ZOS4-10 - C2H2 zinc finger protein, expressed -
20 Sobic.004G074600 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic003G040700 Sobic003G040700 Sobic002G362500 Sobic002G362500 Sobic003G040700--Sobic002G362500 Sobic004G074900 Sobic004G074900 Sobic003G040700--Sobic004G074900 Sobic007G138000 Sobic007G138000 Sobic003G040700--Sobic007G138000 Sobic007G101600 Sobic007G101600 Sobic003G040700--Sobic007G101600 Sobic004G062200 Sobic004G062200 Sobic003G040700--Sobic004G062200 Sobic007G039200 Sobic007G039200 Sobic003G040700--Sobic007G039200 Sobic006G267100 Sobic006G267100 Sobic003G040700--Sobic006G267100 Sobic001G073700 Sobic001G073700 Sobic003G040700--Sobic001G073700 Sobic002G389600 Sobic002G389600 Sobic003G040700--Sobic002G389600 Sobic001G322400 Sobic001G322400 Sobic002G362500--Sobic001G322400 Sobic001G072000 Sobic001G072000 Sobic002G362500--Sobic001G072000 Sobic009G201000 Sobic009G201000 Sobic002G362500--Sobic009G201000 Sobic008G166100 Sobic008G166100 Sobic002G362500--Sobic008G166100 Sobic002G362500--Sobic007G039200 Sobic009G163100 Sobic009G163100 Sobic002G362500--Sobic009G163100 Sobic004G113600 Sobic004G113600 Sobic002G362500--Sobic004G113600 Sobic001G387300 Sobic001G387300 Sobic002G362500--Sobic001G387300 Sobic002G362500--Sobic004G074900 Sobic004G074900--Sobic007G101600 Sobic008G141600 Sobic008G141600 Sobic004G074900--Sobic008G141600 Sobic003G238250 Sobic003G238250 Sobic004G074900--Sobic003G238250 Sobic002G102300 Sobic002G102300 Sobic004G074900--Sobic002G102300 Sobic001G286900 Sobic001G286900 Sobic004G074900--Sobic001G286900 Sobic004G074900--Sobic006G267100 Sobic004G038500 Sobic004G038500 Sobic004G074900--Sobic004G038500 Sobic004G074900--Sobic007G138000 Sobic010G006800 Sobic010G006800 Sobic004G074900--Sobic010G006800 Sobic004G042501 Sobic004G042501 Sobic007G138000--Sobic004G042501 Sobic007G070900 Sobic007G070900 Sobic007G138000--Sobic007G070900 Sobic002G106600 Sobic002G106600 Sobic007G138000--Sobic002G106600 Sobic004G180100 Sobic004G180100 Sobic007G138000--Sobic004G180100 Sobic005G003700 Sobic005G003700 Sobic007G138000--Sobic005G003700 Sobic005G135100 Sobic005G135100 Sobic007G138000--Sobic005G135100 Sobic002G340600 Sobic002G340600 Sobic007G138000--Sobic002G340600 Sobic001G357400 Sobic001G357400 Sobic007G138000--Sobic001G357400 Sobic007G138000--Sobic007G101600 Sobic007G101600--Sobic001G286900 Sobic007G101600--Sobic007G138000 Sobic007G101600--Sobic005G135100 Sobic007G101600--Sobic003G238250 Sobic002G257001 Sobic002G257001 Sobic007G101600--Sobic002G257001 Sobic007G101600--Sobic004G042501 Sobic007G101600--Sobic010G006800 Sobic007G101600--Sobic002G106600 Sobic007G101600--Sobic007G070900 Sobic006G171600 Sobic006G171600 Sobic004G062200--Sobic006G171600 Sobic004G279200 Sobic004G279200 Sobic004G062200--Sobic004G279200 Sobic004G062200--Sobic001G072000 Sobic001G112600 Sobic001G112600 Sobic004G062200--Sobic001G112600 Sobic006G070564 Sobic006G070564 Sobic004G062200--Sobic006G070564 Sobic010G052900 Sobic010G052900 Sobic004G062200--Sobic010G052900 Sobic005G050400 Sobic005G050400 Sobic004G062200--Sobic005G050400 Sobic006G115700 Sobic006G115700 Sobic004G062200--Sobic006G115700 Sobic007G063800 Sobic007G063800 Sobic004G062200--Sobic007G063800 Sobic001G340800 Sobic001G340800 Sobic007G039200--Sobic001G340800 Sobic007G039200--Sobic002G389600 Sobic009G061500 Sobic009G061500 Sobic007G039200--Sobic009G061500 Sobic008G136601 Sobic008G136601 Sobic007G039200--Sobic008G136601 Sobic009G230800 Sobic009G230800 Sobic007G039200--Sobic009G230800 Sobic004G290600 Sobic004G290600 Sobic007G039200--Sobic004G290600 Sobic007G039200--Sobic008G166100 Sobic001G384200 Sobic001G384200 Sobic007G039200--Sobic001G384200 Sobic008G159701 Sobic008G159701 Sobic007G039200--Sobic008G159701 Sobic008G071300 Sobic008G071300 Sobic006G267100--Sobic008G071300 Sobic001G414650 Sobic001G414650 Sobic006G267100--Sobic001G414650 Sobic006G267100--Sobic002G340600 Sobic003G114600 Sobic003G114600 Sobic006G267100--Sobic003G114600 Sobic002G283200 Sobic002G283200 Sobic006G267100--Sobic002G283200 Sobic006G105100 Sobic006G105100 Sobic006G267100--Sobic006G105100 Sobic006G267100--Sobic004G042501 Sobic002G380300 Sobic002G380300 Sobic006G267100--Sobic002G380300 Sobic003G290500 Sobic003G290500 Sobic006G267100--Sobic003G290500 Sobic001G073700--Sobic009G201000 Sobic001G073700--Sobic002G362500 Sobic006G156400 Sobic006G156400 Sobic001G073700--Sobic006G156400 Sobic001G073700--Sobic001G322400 Sobic006G050100 Sobic006G050100 Sobic001G073700--Sobic006G050100 Sobic003G352900 Sobic003G352900 Sobic001G073700--Sobic003G352900 Sobic001G073700--Sobic008G166100 Sobic001G073700--Sobic001G072000 Sobic008G141100 Sobic008G141100 Sobic001G073700--Sobic008G141100 Sobic002G389600--Sobic008G136601 Sobic008G148600 Sobic008G148600 Sobic002G389600--Sobic008G148600 Sobic006G069766 Sobic006G069766 Sobic002G389600--Sobic006G069766 Sobic002G389600--Sobic009G061500 Sobic002G389600--Sobic001G340800 Sobic003G304600 Sobic003G304600 Sobic002G389600--Sobic003G304600 Sobic002G389600--Sobic006G105100 Sobic004G358000 Sobic004G358000 Sobic002G389600--Sobic004G358000 Sobic002G389600--Sobic002G380300
Octagon: transcription factors


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