Gene annotation
Transcriptome id Sobic.006G045100.2
Synonym
Functional annotation -
UniProt A0A1Z5RC56
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G040700 choline/ethanolamine kinase, putative, expressed K14156: choline/ethanolamine kinase
2 Sobic.007G039200 MYB family transcription factor, putative, expressed -
3 Sobic.009G048400 - -
4 Sobic.004G074900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
5 Sobic.007G138000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
6 Sobic.007G101600 - -
7 Sobic.002G362500 expressed protein -
8 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G389600 transcription regulator, putative, expressed -
10 Sobic.001G490950 - -
11 Sobic.005G225500 expressed protein -
12 Sobic.007G070900 OsFBL43 - F-box domain and LRR containing protein, expressed -
13 Sobic.004G042501 - -
14 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
15 Sobic.009G106700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
16 Sobic.002G102300 - -
17 Sobic.010G202200 - -
18 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
19 Sobic.004G290600 beige/BEACH domain containing protein, expressed -
20 Sobic.009G230800 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@inhibiting the nuclear localization of BRASSINOSTEROID INSENSITIVE 2(PubMedID : 28273925)@decreased the cell proliferation rates(PubMedID : 27329702)@gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase


Gene co-expression network
sample Sobic006G045100 Sobic006G045100 Sobic003G040700 Sobic003G040700 Sobic006G045100--Sobic003G040700 Sobic007G039200 Sobic007G039200 Sobic006G045100--Sobic007G039200 Sobic009G048400 Sobic009G048400 Sobic006G045100--Sobic009G048400 Sobic004G074900 Sobic004G074900 Sobic006G045100--Sobic004G074900 Sobic007G138000 Sobic007G138000 Sobic006G045100--Sobic007G138000 Sobic007G101600 Sobic007G101600 Sobic006G045100--Sobic007G101600 Sobic002G362500 Sobic002G362500 Sobic006G045100--Sobic002G362500 Sobic006G267100 Sobic006G267100 Sobic006G045100--Sobic006G267100 Sobic002G389600 Sobic002G389600 Sobic006G045100--Sobic002G389600 Sobic003G040700--Sobic002G362500 Sobic003G040700--Sobic004G074900 Sobic003G040700--Sobic007G138000 Sobic003G040700--Sobic007G101600 Sobic004G062200 Sobic004G062200 Sobic003G040700--Sobic004G062200 Sobic003G040700--Sobic007G039200 Sobic003G040700--Sobic006G267100 Sobic001G073700 Sobic001G073700 Sobic003G040700--Sobic001G073700 Sobic003G040700--Sobic002G389600 Sobic001G340800 Sobic001G340800 Sobic007G039200--Sobic001G340800 Sobic007G039200--Sobic002G389600 Sobic009G061500 Sobic009G061500 Sobic007G039200--Sobic009G061500 Sobic008G136601 Sobic008G136601 Sobic007G039200--Sobic008G136601 Sobic009G230800 Sobic009G230800 Sobic007G039200--Sobic009G230800 Sobic004G290600 Sobic004G290600 Sobic007G039200--Sobic004G290600 Sobic008G166100 Sobic008G166100 Sobic007G039200--Sobic008G166100 Sobic001G384200 Sobic001G384200 Sobic007G039200--Sobic001G384200 Sobic008G159701 Sobic008G159701 Sobic007G039200--Sobic008G159701 Sobic009G048400--Sobic003G040700 Sobic010G128350 Sobic010G128350 Sobic009G048400--Sobic010G128350 Sobic010G010201 Sobic010G010201 Sobic009G048400--Sobic010G010201 Sobic009G048400--Sobic007G039200 Sobic009G048400--Sobic007G138000 Sobic001G322400 Sobic001G322400 Sobic009G048400--Sobic001G322400 Sobic010G073900 Sobic010G073900 Sobic009G048400--Sobic010G073900 Sobic009G048400--Sobic006G267100 Sobic009G048400--Sobic006G045100 Sobic004G074900--Sobic007G101600 Sobic008G141600 Sobic008G141600 Sobic004G074900--Sobic008G141600 Sobic003G238250 Sobic003G238250 Sobic004G074900--Sobic003G238250 Sobic002G102300 Sobic002G102300 Sobic004G074900--Sobic002G102300 Sobic001G286900 Sobic001G286900 Sobic004G074900--Sobic001G286900 Sobic004G074900--Sobic006G267100 Sobic004G038500 Sobic004G038500 Sobic004G074900--Sobic004G038500 Sobic004G074900--Sobic007G138000 Sobic010G006800 Sobic010G006800 Sobic004G074900--Sobic010G006800 Sobic004G042501 Sobic004G042501 Sobic007G138000--Sobic004G042501 Sobic007G070900 Sobic007G070900 Sobic007G138000--Sobic007G070900 Sobic002G106600 Sobic002G106600 Sobic007G138000--Sobic002G106600 Sobic004G180100 Sobic004G180100 Sobic007G138000--Sobic004G180100 Sobic005G003700 Sobic005G003700 Sobic007G138000--Sobic005G003700 Sobic005G135100 Sobic005G135100 Sobic007G138000--Sobic005G135100 Sobic002G340600 Sobic002G340600 Sobic007G138000--Sobic002G340600 Sobic001G357400 Sobic001G357400 Sobic007G138000--Sobic001G357400 Sobic007G138000--Sobic007G101600 Sobic007G101600--Sobic001G286900 Sobic007G101600--Sobic007G138000 Sobic007G101600--Sobic005G135100 Sobic007G101600--Sobic003G238250 Sobic002G257001 Sobic002G257001 Sobic007G101600--Sobic002G257001 Sobic007G101600--Sobic004G042501 Sobic007G101600--Sobic010G006800 Sobic007G101600--Sobic002G106600 Sobic007G101600--Sobic007G070900 Sobic002G362500--Sobic001G322400 Sobic001G072000 Sobic001G072000 Sobic002G362500--Sobic001G072000 Sobic009G201000 Sobic009G201000 Sobic002G362500--Sobic009G201000 Sobic002G362500--Sobic008G166100 Sobic002G362500--Sobic007G039200 Sobic009G163100 Sobic009G163100 Sobic002G362500--Sobic009G163100 Sobic004G113600 Sobic004G113600 Sobic002G362500--Sobic004G113600 Sobic001G387300 Sobic001G387300 Sobic002G362500--Sobic001G387300 Sobic002G362500--Sobic004G074900 Sobic008G071300 Sobic008G071300 Sobic006G267100--Sobic008G071300 Sobic001G414650 Sobic001G414650 Sobic006G267100--Sobic001G414650 Sobic006G267100--Sobic002G340600 Sobic003G114600 Sobic003G114600 Sobic006G267100--Sobic003G114600 Sobic002G283200 Sobic002G283200 Sobic006G267100--Sobic002G283200 Sobic006G105100 Sobic006G105100 Sobic006G267100--Sobic006G105100 Sobic006G267100--Sobic004G042501 Sobic002G380300 Sobic002G380300 Sobic006G267100--Sobic002G380300 Sobic003G290500 Sobic003G290500 Sobic006G267100--Sobic003G290500 Sobic002G389600--Sobic008G136601 Sobic008G148600 Sobic008G148600 Sobic002G389600--Sobic008G148600 Sobic006G069766 Sobic006G069766 Sobic002G389600--Sobic006G069766 Sobic002G389600--Sobic009G061500 Sobic002G389600--Sobic001G340800 Sobic003G304600 Sobic003G304600 Sobic002G389600--Sobic003G304600 Sobic002G389600--Sobic006G105100 Sobic004G358000 Sobic004G358000 Sobic002G389600--Sobic004G358000 Sobic002G389600--Sobic002G380300
Octagon: transcription factors


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