Gene annotation
Transcriptome id Sobic.002G362500.2,Sobic.002G362500.1
Synonym Sb02g038255
Functional annotation expressed protein
UniProt A0A1B6QFD7
Pfam PF05915
Panther DB PTHR15664 PTHR15664:SF3
NCBI CDD KOG4753; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G29170 : Eukaryotic protein of unknown function (DUF872)
RAP-DB (Rice) LOC_Os12g03500.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK14409 , KQK15434 , KQK15433
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G362500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G322400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@actin-depolymerizing factor, putative, expressed K05765: cofilin
2 Sobic.001G072000 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
3 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
4 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
5 Sobic.007G039200 MYB family transcription factor, putative, expressed -
6 Sobic.009G163100 kinesin motor domain containing protein, putative, expressed K10403: kinesin family member 22
7 Sobic.004G113600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
8 Sobic.001G387300 exostosin family domain containing protein, expressed -
9 Sobic.004G074900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
10 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
11 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
12 Sobic.004G038500 cyclin-related protein, putative, expressed -
13 Sobic.003G040700 choline/ethanolamine kinase, putative, expressed K14156: choline/ethanolamine kinase
14 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
15 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
16 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
17 Sobic.002G414800 PPR repeat domain containing protein, putative, expressed -
18 Sobic.007G048101 - -
19 Sobic.004G107100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CID11, putative, expressed -
20 Sobic.005G050400 syntaxin 6, putative, expressed -


Gene co-expression network
sample Sobic002G362500 Sobic002G362500 Sobic001G322400 Sobic001G322400 Sobic002G362500--Sobic001G322400 Sobic001G072000 Sobic001G072000 Sobic002G362500--Sobic001G072000 Sobic009G201000 Sobic009G201000 Sobic002G362500--Sobic009G201000 Sobic008G166100 Sobic008G166100 Sobic002G362500--Sobic008G166100 Sobic007G039200 Sobic007G039200 Sobic002G362500--Sobic007G039200 Sobic009G163100 Sobic009G163100 Sobic002G362500--Sobic009G163100 Sobic004G113600 Sobic004G113600 Sobic002G362500--Sobic004G113600 Sobic001G387300 Sobic001G387300 Sobic002G362500--Sobic001G387300 Sobic004G074900 Sobic004G074900 Sobic002G362500--Sobic004G074900 Sobic001G322400--Sobic001G072000 Sobic010G073900 Sobic010G073900 Sobic001G322400--Sobic010G073900 Sobic001G432200 Sobic001G432200 Sobic001G322400--Sobic001G432200 Sobic001G322400--Sobic008G166100 Sobic004G279200 Sobic004G279200 Sobic001G322400--Sobic004G279200 Sobic007G048101 Sobic007G048101 Sobic001G322400--Sobic007G048101 Sobic009G202000 Sobic009G202000 Sobic001G322400--Sobic009G202000 Sobic009G238650 Sobic009G238650 Sobic001G322400--Sobic009G238650 Sobic003G407700 Sobic003G407700 Sobic001G322400--Sobic003G407700 Sobic001G072000--Sobic001G322400 Sobic005G050400 Sobic005G050400 Sobic001G072000--Sobic005G050400 Sobic001G112600 Sobic001G112600 Sobic001G072000--Sobic001G112600 Sobic001G072000--Sobic004G279200 Sobic008G156600 Sobic008G156600 Sobic001G072000--Sobic008G156600 Sobic001G072000--Sobic001G432200 Sobic001G072000--Sobic009G163100 Sobic009G242200 Sobic009G242200 Sobic001G072000--Sobic009G242200 Sobic004G038500 Sobic004G038500 Sobic001G072000--Sobic004G038500 Sobic003G352900 Sobic003G352900 Sobic009G201000--Sobic003G352900 Sobic009G201000--Sobic008G166100 Sobic001G384200 Sobic001G384200 Sobic009G201000--Sobic001G384200 Sobic009G201000--Sobic002G362500 Sobic009G201000--Sobic001G072000 Sobic006G265800 Sobic006G265800 Sobic009G201000--Sobic006G265800 Sobic009G201000--Sobic001G322400 Sobic009G201000--Sobic007G039200 Sobic006G156400 Sobic006G156400 Sobic009G201000--Sobic006G156400 Sobic008G166100--Sobic001G384200 Sobic008G166100--Sobic007G039200 Sobic009G178400 Sobic009G178400 Sobic008G166100--Sobic009G178400 Sobic008G166100--Sobic001G322400 Sobic003G024100 Sobic003G024100 Sobic008G166100--Sobic003G024100 Sobic008G166100--Sobic009G202000 Sobic001G340800 Sobic001G340800 Sobic008G166100--Sobic001G340800 Sobic008G166100--Sobic001G387300 Sobic008G166100--Sobic001G432200 Sobic007G039200--Sobic001G340800 Sobic002G389600 Sobic002G389600 Sobic007G039200--Sobic002G389600 Sobic009G061500 Sobic009G061500 Sobic007G039200--Sobic009G061500 Sobic008G136601 Sobic008G136601 Sobic007G039200--Sobic008G136601 Sobic009G230800 Sobic009G230800 Sobic007G039200--Sobic009G230800 Sobic004G290600 Sobic004G290600 Sobic007G039200--Sobic004G290600 Sobic007G039200--Sobic008G166100 Sobic007G039200--Sobic001G384200 Sobic008G159701 Sobic008G159701 Sobic007G039200--Sobic008G159701 Sobic009G163100--Sobic008G156600 Sobic005G020600 Sobic005G020600 Sobic009G163100--Sobic005G020600 Sobic008G171900 Sobic008G171900 Sobic009G163100--Sobic008G171900 Sobic009G163100--Sobic001G072000 Sobic002G299500 Sobic002G299500 Sobic009G163100--Sobic002G299500 Sobic009G163100--Sobic005G050400 Sobic001G435700 Sobic001G435700 Sobic009G163100--Sobic001G435700 Sobic009G163100--Sobic001G112600 Sobic009G163100--Sobic001G322400 Sobic004G113600--Sobic001G112600 Sobic003G244400 Sobic003G244400 Sobic004G113600--Sobic003G244400 Sobic004G358000 Sobic004G358000 Sobic004G113600--Sobic004G358000 Sobic004G113600--Sobic009G242200 Sobic002G170100 Sobic002G170100 Sobic004G113600--Sobic002G170100 Sobic004G113600--Sobic005G050400 Sobic004G113600--Sobic001G384200 Sobic001G400000 Sobic001G400000 Sobic004G113600--Sobic001G400000 Sobic005G054150 Sobic005G054150 Sobic004G113600--Sobic005G054150 Sobic001G387300--Sobic001G384200 Sobic001G387300--Sobic009G178400 Sobic001G387300--Sobic008G166100 Sobic001G387300--Sobic001G322400 Sobic001G387300--Sobic004G113600 Sobic001G387300--Sobic009G202000 Sobic001G387300--Sobic003G244400 Sobic001G387300--Sobic001G072000 Sobic001G387300--Sobic001G432200 Sobic007G101600 Sobic007G101600 Sobic004G074900--Sobic007G101600 Sobic008G141600 Sobic008G141600 Sobic004G074900--Sobic008G141600 Sobic003G238250 Sobic003G238250 Sobic004G074900--Sobic003G238250 Sobic002G102300 Sobic002G102300 Sobic004G074900--Sobic002G102300 Sobic001G286900 Sobic001G286900 Sobic004G074900--Sobic001G286900 Sobic006G267100 Sobic006G267100 Sobic004G074900--Sobic006G267100 Sobic004G074900--Sobic004G038500 Sobic007G138000 Sobic007G138000 Sobic004G074900--Sobic007G138000 Sobic010G006800 Sobic010G006800 Sobic004G074900--Sobic010G006800
Octagon: transcription factors


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