Gene annotation
Transcriptome id Sobic.004G074900.1,Sobic.004G074900.2
Synonym Sb04g006190
Functional annotation serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed
UniProt C5XX35
Pfam PF13499
Panther DB PTHR14095 PTHR14095:SF7
NCBI CDD -
KEGG Orthology K11583; serine/threonine-protein phosphatase 2A regulatory subunit B''
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G28850 : Calcium-binding EF-hand family protein
RAP-DB (Rice) LOC_Os02g09840.1 : serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed
MaizeGDB (Corn) Zm00025a034695 , Zm00025a019401
Brachypodium KQJ93780 , KQJ93778 , KQJ93779
Barley HORVU6Hr1G034840.3 , HORVU6Hr1G034840.2 , HORVU6Hr1G034840.1 , HORVU6Hr1G034840.7 , HORVU6Hr1G034840.6 , HORVU6Hr1G034840.5 , HORVU6Hr1G034840.4 , HORVU6Hr1G034840.8
Wheat TraesCS1D02G152300 , TraesCS6A02G170400 , TraesCS6D02G160100 , TraesCS6D02G160100 , TraesCS6B02G198600 , TraesCS6B02G198600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G101600 - -
2 Sobic.008G141600 expressed protein -
3 Sobic.003G238250 - -
4 Sobic.002G102300 - -
5 Sobic.001G286900 - -
6 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G038500 cyclin-related protein, putative, expressed -
8 Sobic.007G138000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
9 Sobic.010G006800 auxin-induced protein 5NG4, putative, expressed -
10 Sobic.009G106700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
11 Sobic.002G368100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@COBRA, putative, expressed -
12 Sobic.001G490950 - -
13 Sobic.003G211800 expressed protein -
14 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
15 Sobic.002G257001 - K13947: auxin efflux carrier family protein
16 Sobic.002G362500 expressed protein -
17 Sobic.005G225500 expressed protein -
18 Sobic.004G180100 - -
19 Sobic.007G070900 OsFBL43 - F-box domain and LRR containing protein, expressed -
20 Sobic.002G389600 transcription regulator, putative, expressed -


Gene co-expression network
sample Sobic004G074900 Sobic004G074900 Sobic007G101600 Sobic007G101600 Sobic004G074900--Sobic007G101600 Sobic008G141600 Sobic008G141600 Sobic004G074900--Sobic008G141600 Sobic003G238250 Sobic003G238250 Sobic004G074900--Sobic003G238250 Sobic002G102300 Sobic002G102300 Sobic004G074900--Sobic002G102300 Sobic001G286900 Sobic001G286900 Sobic004G074900--Sobic001G286900 Sobic006G267100 Sobic006G267100 Sobic004G074900--Sobic006G267100 Sobic004G038500 Sobic004G038500 Sobic004G074900--Sobic004G038500 Sobic007G138000 Sobic007G138000 Sobic004G074900--Sobic007G138000 Sobic010G006800 Sobic010G006800 Sobic004G074900--Sobic010G006800 Sobic007G101600--Sobic001G286900 Sobic007G101600--Sobic007G138000 Sobic005G135100 Sobic005G135100 Sobic007G101600--Sobic005G135100 Sobic007G101600--Sobic003G238250 Sobic002G257001 Sobic002G257001 Sobic007G101600--Sobic002G257001 Sobic004G042501 Sobic004G042501 Sobic007G101600--Sobic004G042501 Sobic007G101600--Sobic010G006800 Sobic002G106600 Sobic002G106600 Sobic007G101600--Sobic002G106600 Sobic007G070900 Sobic007G070900 Sobic007G101600--Sobic007G070900 Sobic008G141600--Sobic004G074900 Sobic008G141600--Sobic003G238250 Sobic002G368100 Sobic002G368100 Sobic008G141600--Sobic002G368100 Sobic008G141600--Sobic007G101600 Sobic008G141600--Sobic010G006800 Sobic001G490950 Sobic001G490950 Sobic008G141600--Sobic001G490950 Sobic008G141600--Sobic002G102300 Sobic008G141600--Sobic006G267100 Sobic008G141600--Sobic007G138000 Sobic003G238250--Sobic007G101600 Sobic003G238250--Sobic010G006800 Sobic003G238250--Sobic001G286900 Sobic003G238250--Sobic002G102300 Sobic003G238250--Sobic004G074900 Sobic003G238250--Sobic007G138000 Sobic003G238250--Sobic002G257001 Sobic003G238250--Sobic005G135100 Sobic005G225500 Sobic005G225500 Sobic003G238250--Sobic005G225500 Sobic002G102300--Sobic010G006800 Sobic002G102300--Sobic007G101600 Sobic002G102300--Sobic003G238250 Sobic002G102300--Sobic001G490950 Sobic002G102300--Sobic004G074900 Sobic003G392275 Sobic003G392275 Sobic002G102300--Sobic003G392275 Sobic004G140400 Sobic004G140400 Sobic002G102300--Sobic004G140400 Sobic002G102300--Sobic001G286900 Sobic002G102300--Sobic007G138000 Sobic001G286900--Sobic002G257001 Sobic001G333700 Sobic001G333700 Sobic001G286900--Sobic001G333700 Sobic001G286900--Sobic005G135100 Sobic001G286900--Sobic004G042501 Sobic001G286900--Sobic002G106600 Sobic007G176900 Sobic007G176900 Sobic001G286900--Sobic007G176900 Sobic001G286900--Sobic007G070900 Sobic001G286900--Sobic007G101600 Sobic005G049850 Sobic005G049850 Sobic001G286900--Sobic005G049850 Sobic008G071300 Sobic008G071300 Sobic006G267100--Sobic008G071300 Sobic001G414650 Sobic001G414650 Sobic006G267100--Sobic001G414650 Sobic002G340600 Sobic002G340600 Sobic006G267100--Sobic002G340600 Sobic003G114600 Sobic003G114600 Sobic006G267100--Sobic003G114600 Sobic002G283200 Sobic002G283200 Sobic006G267100--Sobic002G283200 Sobic006G105100 Sobic006G105100 Sobic006G267100--Sobic006G105100 Sobic006G267100--Sobic004G042501 Sobic002G380300 Sobic002G380300 Sobic006G267100--Sobic002G380300 Sobic003G290500 Sobic003G290500 Sobic006G267100--Sobic003G290500 Sobic001G072000 Sobic001G072000 Sobic004G038500--Sobic001G072000 Sobic004G279200 Sobic004G279200 Sobic004G038500--Sobic004G279200 Sobic001G230801 Sobic001G230801 Sobic004G038500--Sobic001G230801 Sobic004G038500--Sobic006G267100 Sobic004G038500--Sobic004G074900 Sobic001G322400 Sobic001G322400 Sobic004G038500--Sobic001G322400 Sobic003G005700 Sobic003G005700 Sobic004G038500--Sobic003G005700 Sobic005G050400 Sobic005G050400 Sobic004G038500--Sobic005G050400 Sobic001G112600 Sobic001G112600 Sobic004G038500--Sobic001G112600 Sobic007G138000--Sobic004G042501 Sobic007G138000--Sobic007G070900 Sobic007G138000--Sobic002G106600 Sobic004G180100 Sobic004G180100 Sobic007G138000--Sobic004G180100 Sobic005G003700 Sobic005G003700 Sobic007G138000--Sobic005G003700 Sobic007G138000--Sobic005G135100 Sobic007G138000--Sobic002G340600 Sobic001G357400 Sobic001G357400 Sobic007G138000--Sobic001G357400 Sobic007G138000--Sobic007G101600 Sobic010G006800--Sobic003G238250 Sobic010G006800--Sobic007G101600 Sobic010G006800--Sobic002G102300 Sobic010G006800--Sobic001G490950 Sobic010G006800--Sobic004G074900 Sobic010G006800--Sobic007G138000 Sobic010G006800--Sobic001G286900 Sobic008G057600 Sobic008G057600 Sobic010G006800--Sobic008G057600 Sobic010G006800--Sobic003G392275
Octagon: transcription factors


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