Gene annotation
Transcriptome id Sobic.003G211800.1
Synonym Sb03g027150
Functional annotation expressed protein
UniProt C5XQA5
Pfam PF12937
Panther DB PTHR31264 PTHR31264:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g41950.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G418300 vacuolar-sorting receptor precursor, putative, expressed -
2 Sobic.001G417700 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
3 Sobic.009G048700 expressed protein -
4 Sobic.009G145000 early-responsive to dehydration protein-related, putative, expressed -
5 Sobic.009G008000 transcription factor Dp, putative, expressed -
6 Sobic.002G243400 transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
7 Sobic.008G056600 OsFBX237 - F-box domain containing protein, expressed -
8 Sobic.001G136000 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
9 Sobic.002G099700 OsFBX195 - F-box domain containing protein, expressed -
10 Sobic.004G168900 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
11 Sobic.002G189500 expressed protein -
12 Sobic.006G266400 B3 DNA binding domain containing protein, expressed -
13 Sobic.007G128000 cytochrome P450, putative, expressed -
14 Sobic.008G155700 ankyrin repeat domain-containing protein 44, putative, expressed -
15 Sobic.007G094700 - -
16 Sobic.002G101600 - -
17 Sobic.010G242600 OsFBDUF52 - F-box and DUF domain containing protein, expressed -
18 Sobic.002G097200 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
19 Sobic.005G037600 - -
20 Sobic.006G162500 - -


Gene co-expression network
sample Sobic003G211800 Sobic003G211800 Sobic002G418300 Sobic002G418300 Sobic003G211800--Sobic002G418300 Sobic001G417700 Sobic001G417700 Sobic003G211800--Sobic001G417700 Sobic009G048700 Sobic009G048700 Sobic003G211800--Sobic009G048700 Sobic009G145000 Sobic009G145000 Sobic003G211800--Sobic009G145000 Sobic009G008000 Sobic009G008000 Sobic003G211800--Sobic009G008000 Sobic002G243400 Sobic002G243400 Sobic003G211800--Sobic002G243400 Sobic008G056600 Sobic008G056600 Sobic003G211800--Sobic008G056600 Sobic001G136000 Sobic001G136000 Sobic003G211800--Sobic001G136000 Sobic002G099700 Sobic002G099700 Sobic003G211800--Sobic002G099700 Sobic002G418300--Sobic001G417700 Sobic007G094700 Sobic007G094700 Sobic002G418300--Sobic007G094700 Sobic003G133600 Sobic003G133600 Sobic002G418300--Sobic003G133600 Sobic004G203150 Sobic004G203150 Sobic002G418300--Sobic004G203150 Sobic001G029300 Sobic001G029300 Sobic002G418300--Sobic001G029300 Sobic002G101600 Sobic002G101600 Sobic002G418300--Sobic002G101600 Sobic004G328200 Sobic004G328200 Sobic002G418300--Sobic004G328200 Sobic002G189500 Sobic002G189500 Sobic002G418300--Sobic002G189500 Sobic008G155700 Sobic008G155700 Sobic002G418300--Sobic008G155700 Sobic007G128000 Sobic007G128000 Sobic001G417700--Sobic007G128000 Sobic001G417700--Sobic002G418300 Sobic001G417700--Sobic007G094700 Sobic001G417700--Sobic009G145000 Sobic001G417700--Sobic002G101600 Sobic006G266400 Sobic006G266400 Sobic001G417700--Sobic006G266400 Sobic001G417700--Sobic001G136000 Sobic001G417700--Sobic002G189500 Sobic001G240600 Sobic001G240600 Sobic001G417700--Sobic001G240600 Sobic009G048700--Sobic009G008000 Sobic009G048700--Sobic001G417700 Sobic009G048700--Sobic008G155700 Sobic009G048700--Sobic009G145000 Sobic009G048700--Sobic007G094700 Sobic006G199500 Sobic006G199500 Sobic009G048700--Sobic006G199500 Sobic009G048700--Sobic004G203150 Sobic009G048700--Sobic002G418300 Sobic007G219601 Sobic007G219601 Sobic009G048700--Sobic007G219601 Sobic009G145000--Sobic002G189500 Sobic009G145000--Sobic001G417700 Sobic009G145000--Sobic004G328200 Sobic009G145000--Sobic001G029300 Sobic009G145000--Sobic006G266400 Sobic004G190400 Sobic004G190400 Sobic009G145000--Sobic004G190400 Sobic009G145000--Sobic009G008000 Sobic009G145000--Sobic004G203150 Sobic009G145000--Sobic007G094700 Sobic009G008000--Sobic009G048700 Sobic009G008000--Sobic007G094700 Sobic009G008000--Sobic004G203150 Sobic009G008000--Sobic001G417700 Sobic009G008000--Sobic009G145000 Sobic009G008000--Sobic007G219601 Sobic009G008000--Sobic008G155700 Sobic009G008000--Sobic002G418300 Sobic009G008000--Sobic002G189500 Sobic002G243400--Sobic009G145000 Sobic002G243400--Sobic001G417700 Sobic002G243400--Sobic009G048700 Sobic002G243400--Sobic002G189500 Sobic010G061600 Sobic010G061600 Sobic002G243400--Sobic010G061600 Sobic002G243400--Sobic009G008000 Sobic009G002100 Sobic009G002100 Sobic002G243400--Sobic009G002100 Sobic002G243400--Sobic002G418300 Sobic002G243400--Sobic004G190400 Sobic008G056600--Sobic002G418300 Sobic008G056600--Sobic001G417700 Sobic008G056600--Sobic007G094700 Sobic008G056600--Sobic002G101600 Sobic008G056600--Sobic001G029300 Sobic008G056600--Sobic009G048700 Sobic008G056600--Sobic006G266400 Sobic008G056600--Sobic007G128000 Sobic008G056600--Sobic003G133600 Sobic001G136000--Sobic007G128000 Sobic001G136000--Sobic001G417700 Sobic009G060100 Sobic009G060100 Sobic001G136000--Sobic009G060100 Sobic010G129450 Sobic010G129450 Sobic001G136000--Sobic010G129450 Sobic001G136000--Sobic002G101600 Sobic001G136000--Sobic006G266400 Sobic007G082100 Sobic007G082100 Sobic001G136000--Sobic007G082100 Sobic007G081100 Sobic007G081100 Sobic001G136000--Sobic007G081100 Sobic001G136000--Sobic001G240600 Sobic002G304801 Sobic002G304801 Sobic002G099700--Sobic002G304801 Sobic002G099700--Sobic001G136000 Sobic002G080450 Sobic002G080450 Sobic002G099700--Sobic002G080450 Sobic002G099700--Sobic009G060100 Sobic002G099700--Sobic010G129450 Sobic002G099700--Sobic007G128000 Sobic002G099700--Sobic007G081100 Sobic002G099700--Sobic007G082100 Sobic004G168200 Sobic004G168200 Sobic002G099700--Sobic004G168200
Octagon: transcription factors


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