Gene annotation
Transcriptome id Sobic.005G037600.1
Synonym
Functional annotation -
UniProt C5Y4N4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G060101 - -
2 Sobic.006G266400 B3 DNA binding domain containing protein, expressed -
3 Sobic.002G189500 expressed protein -
4 Sobic.002G333001 - -
5 Sobic.004G190400 expressed protein -
6 Sobic.002G101600 - -
7 Sobic.007G081100 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.009G068400 SSRP1-like FACT complex subunit, putative, expressed K09272: structure-specific recognition protein 1
9 Sobic.003G070400 expressed protein -
10 Sobic.010G242600 OsFBDUF52 - F-box and DUF domain containing protein, expressed -
11 Sobic.002G015900 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
12 Sobic.005G140900 OsFBX230 - F-box domain containing protein, expressed -
13 Sobic.008G138400 expressed protein -
14 Sobic.006G017700 expressed protein -
15 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
16 Sobic.001G117100 - -
17 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
18 Sobic.001G063300 CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.010G177200 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
20 Sobic.009G250300 Ser/Thr protein phosphatase family protein, putative, expressed -


Gene co-expression network
sample Sobic005G037600 Sobic005G037600 Sobic002G060101 Sobic002G060101 Sobic005G037600--Sobic002G060101 Sobic006G266400 Sobic006G266400 Sobic005G037600--Sobic006G266400 Sobic002G189500 Sobic002G189500 Sobic005G037600--Sobic002G189500 Sobic002G333001 Sobic002G333001 Sobic005G037600--Sobic002G333001 Sobic004G190400 Sobic004G190400 Sobic005G037600--Sobic004G190400 Sobic002G101600 Sobic002G101600 Sobic005G037600--Sobic002G101600 Sobic007G081100 Sobic007G081100 Sobic005G037600--Sobic007G081100 Sobic009G068400 Sobic009G068400 Sobic005G037600--Sobic009G068400 Sobic003G070400 Sobic003G070400 Sobic005G037600--Sobic003G070400 Sobic002G060101--Sobic005G037600 Sobic002G060101--Sobic006G266400 Sobic002G060101--Sobic002G333001 Sobic002G060101--Sobic003G070400 Sobic002G060101--Sobic009G068400 Sobic002G060101--Sobic007G081100 Sobic002G015900 Sobic002G015900 Sobic002G060101--Sobic002G015900 Sobic002G060101--Sobic002G101600 Sobic005G140900 Sobic005G140900 Sobic002G060101--Sobic005G140900 Sobic006G266400--Sobic002G101600 Sobic006G266400--Sobic002G189500 Sobic010G242600 Sobic010G242600 Sobic006G266400--Sobic010G242600 Sobic010G177200 Sobic010G177200 Sobic006G266400--Sobic010G177200 Sobic001G240600 Sobic001G240600 Sobic006G266400--Sobic001G240600 Sobic001G029300 Sobic001G029300 Sobic006G266400--Sobic001G029300 Sobic009G250300 Sobic009G250300 Sobic006G266400--Sobic009G250300 Sobic006G266400--Sobic002G015900 Sobic006G266400--Sobic003G070400 Sobic002G189500--Sobic004G190400 Sobic002G189500--Sobic006G266400 Sobic002G189500--Sobic001G029300 Sobic002G189500--Sobic010G242600 Sobic001G163666 Sobic001G163666 Sobic002G189500--Sobic001G163666 Sobic002G189500--Sobic002G101600 Sobic009G145000 Sobic009G145000 Sobic002G189500--Sobic009G145000 Sobic002G189500--Sobic001G240600 Sobic002G189500--Sobic010G177200 Sobic001G063300 Sobic001G063300 Sobic002G333001--Sobic001G063300 Sobic002G333001--Sobic002G015900 Sobic007G035200 Sobic007G035200 Sobic002G333001--Sobic007G035200 Sobic003G007650 Sobic003G007650 Sobic002G333001--Sobic003G007650 Sobic005G006400 Sobic005G006400 Sobic002G333001--Sobic005G006400 Sobic007G134501 Sobic007G134501 Sobic002G333001--Sobic007G134501 Sobic002G194201 Sobic002G194201 Sobic002G333001--Sobic002G194201 Sobic008G086500 Sobic008G086500 Sobic002G333001--Sobic008G086500 Sobic001G337100 Sobic001G337100 Sobic002G333001--Sobic001G337100 Sobic004G190400--Sobic002G189500 Sobic004G190400--Sobic006G266400 Sobic004G190400--Sobic010G242600 Sobic004G190400--Sobic001G029300 Sobic004G190400--Sobic001G163666 Sobic002G035733 Sobic002G035733 Sobic004G190400--Sobic002G035733 Sobic006G236400 Sobic006G236400 Sobic004G190400--Sobic006G236400 Sobic002G104801 Sobic002G104801 Sobic004G190400--Sobic002G104801 Sobic004G190400--Sobic010G177200 Sobic002G101600--Sobic006G266400 Sobic002G101600--Sobic009G250300 Sobic002G101600--Sobic002G015900 Sobic004G328200 Sobic004G328200 Sobic002G101600--Sobic004G328200 Sobic002G101600--Sobic001G029300 Sobic004G054900 Sobic004G054900 Sobic002G101600--Sobic004G054900 Sobic002G101600--Sobic010G177200 Sobic002G101600--Sobic001G337100 Sobic002G101600--Sobic001G163666 Sobic002G204500 Sobic002G204500 Sobic007G081100--Sobic002G204500 Sobic007G082100 Sobic007G082100 Sobic007G081100--Sobic007G082100 Sobic003G191200 Sobic003G191200 Sobic007G081100--Sobic003G191200 Sobic007G081100--Sobic003G070400 Sobic007G031200 Sobic007G031200 Sobic007G081100--Sobic007G031200 Sobic004G100300 Sobic004G100300 Sobic007G081100--Sobic004G100300 Sobic009G060100 Sobic009G060100 Sobic007G081100--Sobic009G060100 Sobic002G182701 Sobic002G182701 Sobic007G081100--Sobic002G182701 Sobic001G211700 Sobic001G211700 Sobic007G081100--Sobic001G211700 Sobic009G068400--Sobic003G070400 Sobic007G197000 Sobic007G197000 Sobic009G068400--Sobic007G197000 Sobic005G037700 Sobic005G037700 Sobic009G068400--Sobic005G037700 Sobic007G204200 Sobic007G204200 Sobic009G068400--Sobic007G204200 Sobic003G004000 Sobic003G004000 Sobic009G068400--Sobic003G004000 Sobic004G192600 Sobic004G192600 Sobic009G068400--Sobic004G192600 Sobic001G089400 Sobic001G089400 Sobic009G068400--Sobic001G089400 Sobic008G074100 Sobic008G074100 Sobic009G068400--Sobic008G074100 Sobic010G121700 Sobic010G121700 Sobic009G068400--Sobic010G121700 Sobic003G070400--Sobic007G197000 Sobic003G070400--Sobic007G204200 Sobic003G070400--Sobic010G121700 Sobic003G070400--Sobic009G068400 Sobic009G234900 Sobic009G234900 Sobic003G070400--Sobic009G234900 Sobic008G024200 Sobic008G024200 Sobic003G070400--Sobic008G024200 Sobic003G070400--Sobic003G004000 Sobic003G070400--Sobic005G037700 Sobic009G047100 Sobic009G047100 Sobic003G070400--Sobic009G047100
Octagon: transcription factors


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