Gene annotation
Transcriptome id Sobic.008G141600.2,Sobic.008G141600.1
Synonym Sb08g019240
Functional annotation expressed protein
UniProt C5YQD9 , A0A1Z5R6M1
Pfam PF07839
Panther DB PTHR33349 PTHR33349:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005516; calmodulin binding


Orthologs (automatic annotation)
TAIR AT5G39380 : Plant calmodulin-binding protein-related
RAP-DB (Rice) LOC_Os12g38910.1 : expressed protein
MaizeGDB (Corn) Zm00025a004346
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G074900 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
2 Sobic.003G238250 - -
3 Sobic.002G368100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@COBRA, putative, expressed -
4 Sobic.007G101600 - -
5 Sobic.010G006800 auxin-induced protein 5NG4, putative, expressed -
6 Sobic.001G490950 - -
7 Sobic.002G102300 - -
8 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.007G138000 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
10 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
11 Sobic.010G052900 expressed protein -
12 Sobic.001G286900 - -
13 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
14 Sobic.008G057600 WD-40 repeat family protein, putative, expressed -
15 Sobic.003G110932 - -
16 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
17 Sobic.003G040700 choline/ethanolamine kinase, putative, expressed K14156: choline/ethanolamine kinase
18 Sobic.004G180100 - -
19 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
20 Sobic.010G253400 AIG2-like family domain containing protein, expressed -


Gene co-expression network
sample Sobic008G141600 Sobic008G141600 Sobic004G074900 Sobic004G074900 Sobic008G141600--Sobic004G074900 Sobic003G238250 Sobic003G238250 Sobic008G141600--Sobic003G238250 Sobic002G368100 Sobic002G368100 Sobic008G141600--Sobic002G368100 Sobic007G101600 Sobic007G101600 Sobic008G141600--Sobic007G101600 Sobic010G006800 Sobic010G006800 Sobic008G141600--Sobic010G006800 Sobic001G490950 Sobic001G490950 Sobic008G141600--Sobic001G490950 Sobic002G102300 Sobic002G102300 Sobic008G141600--Sobic002G102300 Sobic006G267100 Sobic006G267100 Sobic008G141600--Sobic006G267100 Sobic007G138000 Sobic007G138000 Sobic008G141600--Sobic007G138000 Sobic004G074900--Sobic007G101600 Sobic004G074900--Sobic008G141600 Sobic004G074900--Sobic003G238250 Sobic004G074900--Sobic002G102300 Sobic001G286900 Sobic001G286900 Sobic004G074900--Sobic001G286900 Sobic004G074900--Sobic006G267100 Sobic004G038500 Sobic004G038500 Sobic004G074900--Sobic004G038500 Sobic004G074900--Sobic007G138000 Sobic004G074900--Sobic010G006800 Sobic003G238250--Sobic007G101600 Sobic003G238250--Sobic010G006800 Sobic003G238250--Sobic001G286900 Sobic003G238250--Sobic002G102300 Sobic003G238250--Sobic004G074900 Sobic003G238250--Sobic007G138000 Sobic002G257001 Sobic002G257001 Sobic003G238250--Sobic002G257001 Sobic005G135100 Sobic005G135100 Sobic003G238250--Sobic005G135100 Sobic005G225500 Sobic005G225500 Sobic003G238250--Sobic005G225500 Sobic002G368100--Sobic004G074900 Sobic002G368100--Sobic001G490950 Sobic002G368100--Sobic008G141600 Sobic001G226900 Sobic001G226900 Sobic002G368100--Sobic001G226900 Sobic002G368100--Sobic010G006800 Sobic010G134700 Sobic010G134700 Sobic002G368100--Sobic010G134700 Sobic002G368100--Sobic002G102300 Sobic002G368100--Sobic003G238250 Sobic002G368100--Sobic007G101600 Sobic007G101600--Sobic001G286900 Sobic007G101600--Sobic007G138000 Sobic007G101600--Sobic005G135100 Sobic007G101600--Sobic003G238250 Sobic007G101600--Sobic002G257001 Sobic004G042501 Sobic004G042501 Sobic007G101600--Sobic004G042501 Sobic007G101600--Sobic010G006800 Sobic002G106600 Sobic002G106600 Sobic007G101600--Sobic002G106600 Sobic007G070900 Sobic007G070900 Sobic007G101600--Sobic007G070900 Sobic010G006800--Sobic003G238250 Sobic010G006800--Sobic007G101600 Sobic010G006800--Sobic002G102300 Sobic010G006800--Sobic001G490950 Sobic010G006800--Sobic004G074900 Sobic010G006800--Sobic007G138000 Sobic010G006800--Sobic001G286900 Sobic008G057600 Sobic008G057600 Sobic010G006800--Sobic008G057600 Sobic003G392275 Sobic003G392275 Sobic010G006800--Sobic003G392275 Sobic001G490950--Sobic002G102300 Sobic001G490950--Sobic010G006800 Sobic001G490950--Sobic004G074900 Sobic001G490950--Sobic007G101600 Sobic001G490950--Sobic003G392275 Sobic001G490950--Sobic003G238250 Sobic001G490950--Sobic001G226900 Sobic001G490950--Sobic002G368100 Sobic001G490950--Sobic007G138000 Sobic002G102300--Sobic010G006800 Sobic002G102300--Sobic007G101600 Sobic002G102300--Sobic003G238250 Sobic002G102300--Sobic001G490950 Sobic002G102300--Sobic004G074900 Sobic002G102300--Sobic003G392275 Sobic004G140400 Sobic004G140400 Sobic002G102300--Sobic004G140400 Sobic002G102300--Sobic001G286900 Sobic002G102300--Sobic007G138000 Sobic008G071300 Sobic008G071300 Sobic006G267100--Sobic008G071300 Sobic001G414650 Sobic001G414650 Sobic006G267100--Sobic001G414650 Sobic002G340600 Sobic002G340600 Sobic006G267100--Sobic002G340600 Sobic003G114600 Sobic003G114600 Sobic006G267100--Sobic003G114600 Sobic002G283200 Sobic002G283200 Sobic006G267100--Sobic002G283200 Sobic006G105100 Sobic006G105100 Sobic006G267100--Sobic006G105100 Sobic006G267100--Sobic004G042501 Sobic002G380300 Sobic002G380300 Sobic006G267100--Sobic002G380300 Sobic003G290500 Sobic003G290500 Sobic006G267100--Sobic003G290500 Sobic007G138000--Sobic004G042501 Sobic007G138000--Sobic007G070900 Sobic007G138000--Sobic002G106600 Sobic004G180100 Sobic004G180100 Sobic007G138000--Sobic004G180100 Sobic005G003700 Sobic005G003700 Sobic007G138000--Sobic005G003700 Sobic007G138000--Sobic005G135100 Sobic007G138000--Sobic002G340600 Sobic001G357400 Sobic001G357400 Sobic007G138000--Sobic001G357400 Sobic007G138000--Sobic007G101600
Octagon: transcription factors


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