Gene annotation
Transcriptome id Sobic.003G342500.2,Sobic.003G342500.3,Sobic.003G342500.6,Sobic.003G342500.5,Sobic.003G342500.4
Synonym Sb03g038660
Functional annotation methyltransferase, putative, expressed
UniProt A0A1W0W064 , A0A1W0W066 , A0A1W0W067 , A0A1W0W085
Pfam PF03141 PF03141 PF03227
Panther DB PTHR10108:SF869 PTHR10108 PTHR10108 PTHR10108:SF869
NCBI CDD KOG3160; Gamma-interferon inducible lysosomal thiol reductase
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT2G40280 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g61250.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a037777 , Zm00025a039741 , Zm00025a027010
Brachypodium PNT73129 , KQK06572 , KQK05798 , KQK05797 , KQK06573
Barley HORVU3Hr1G088050.28 , HORVU1Hr1G070430.11 , HORVU1Hr1G070430.10 , HORVU1Hr1G070430.13 , HORVU1Hr1G070430.14 , HORVU3Hr1G088050.18 , HORVU3Hr1G088050.19 , HORVU3Hr1G088050.16 , HORVU3Hr1G088050.17 , HORVU3Hr1G088050.11 , HORVU3Hr1G088050.12 , HORVU3Hr1G088050.13 , HORVU3Hr1G088050.14 , HORVU3Hr1G088050.15 , HORVU3Hr1G088050.10 , HORVU3Hr1G088050.2 , HORVU3Hr1G088050.3 , HORVU3Hr1G088050.21 , HORVU3Hr1G088050.23 , HORVU3Hr1G088050.22 , HORVU3Hr1G088050.25 , HORVU3Hr1G088050.24 , HORVU3Hr1G088050.27 , HORVU3Hr1G088050.26 , HORVU3Hr1G088050.6 , HORVU1Hr1G070430.9 , HORVU1Hr1G070430.8 , HORVU3Hr1G088050.7 , HORVU1Hr1G070430.5 , HORVU1Hr1G070430.4 , HORVU1Hr1G070430.7 , HORVU1Hr1G070430.6 , HORVU1Hr1G070430.3 , HORVU1Hr1G070430.2 , HORVU3Hr1G088050.5 , HORVU3Hr1G088050.1 , HORVU3Hr1G088050.8 , HORVU3Hr1G088050.9 , HORVU3Hr1G088050.30 , HORVU3Hr1G088050.20 , HORVU3Hr1G088050.29 , HORVU3Hr1G088050.4
Wheat TraesCS3D02G342600 , TraesCS3B02G380800 , TraesCS1A02G297000 , TraesCS1D02G294500 , TraesCS3A02G348800 , TraesCS1B02G305900 , TraesCS3D02G342700 , TraesCS3A02G348700 , TraesCS3B02G380700 , TraesCS3B02G380700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
2 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
3 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
4 Sobic.006G116900 AMP-binding enzyme family protein, expressed -
5 Sobic.006G156400 double-stranded RNA binding motif containing protein, expressed K18998: RNA polymerase II C-terminal domain phosphatase-like 1/2
6 Sobic.006G265800 OsFBX154 - F-box domain containing protein, expressed -
7 Sobic.001G308500 glycosyltransferase family protein 1, putative, expressed -
8 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
9 Sobic.002G108100 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
10 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
11 Sobic.002G102300 - -
12 Sobic.001G135700 - -
13 Sobic.003G392275 - -
14 Sobic.002G158300 ankyrin, putative, expressed -
15 Sobic.007G048900 OsFBX381 - F-box domain containing protein, expressed -
16 Sobic.008G155400 ankyrin, putative, expressed -
17 Sobic.005G048500 serine esterase family protein, putative, expressed -
18 Sobic.001G506400 expressed protein -
19 Sobic.006G134500 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
20 Sobic.003G211800 expressed protein -


Gene co-expression network
sample Sobic003G342500 Sobic003G342500 Sobic009G201000 Sobic009G201000 Sobic003G342500--Sobic009G201000 Sobic003G352900 Sobic003G352900 Sobic003G342500--Sobic003G352900 Sobic001G073700 Sobic001G073700 Sobic003G342500--Sobic001G073700 Sobic006G116900 Sobic006G116900 Sobic003G342500--Sobic006G116900 Sobic006G156400 Sobic006G156400 Sobic003G342500--Sobic006G156400 Sobic006G265800 Sobic006G265800 Sobic003G342500--Sobic006G265800 Sobic001G308500 Sobic001G308500 Sobic003G342500--Sobic001G308500 Sobic001G076600 Sobic001G076600 Sobic003G342500--Sobic001G076600 Sobic002G108100 Sobic002G108100 Sobic003G342500--Sobic002G108100 Sobic009G201000--Sobic003G352900 Sobic008G166100 Sobic008G166100 Sobic009G201000--Sobic008G166100 Sobic001G384200 Sobic001G384200 Sobic009G201000--Sobic001G384200 Sobic002G362500 Sobic002G362500 Sobic009G201000--Sobic002G362500 Sobic001G072000 Sobic001G072000 Sobic009G201000--Sobic001G072000 Sobic009G201000--Sobic006G265800 Sobic001G322400 Sobic001G322400 Sobic009G201000--Sobic001G322400 Sobic007G039200 Sobic007G039200 Sobic009G201000--Sobic007G039200 Sobic009G201000--Sobic006G156400 Sobic007G144100 Sobic007G144100 Sobic003G352900--Sobic007G144100 Sobic002G299500 Sobic002G299500 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic003G352900--Sobic003G376900 Sobic003G352900--Sobic009G201000 Sobic005G045800 Sobic005G045800 Sobic003G352900--Sobic005G045800 Sobic009G163100 Sobic009G163100 Sobic003G352900--Sobic009G163100 Sobic001G385300 Sobic001G385300 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic001G073700--Sobic009G201000 Sobic001G073700--Sobic002G362500 Sobic001G073700--Sobic006G156400 Sobic001G073700--Sobic001G322400 Sobic006G050100 Sobic006G050100 Sobic001G073700--Sobic006G050100 Sobic001G073700--Sobic003G352900 Sobic001G073700--Sobic008G166100 Sobic001G073700--Sobic001G072000 Sobic008G141100 Sobic008G141100 Sobic001G073700--Sobic008G141100 Sobic004G158600 Sobic004G158600 Sobic006G116900--Sobic004G158600 Sobic006G116900--Sobic003G342500 Sobic002G121450 Sobic002G121450 Sobic006G116900--Sobic002G121450 Sobic006G116900--Sobic009G201000 Sobic006G116900--Sobic003G352900 Sobic004G093100 Sobic004G093100 Sobic006G116900--Sobic004G093100 Sobic010G238300 Sobic010G238300 Sobic006G116900--Sobic010G238300 Sobic003G175350 Sobic003G175350 Sobic006G116900--Sobic003G175350 Sobic006G116900--Sobic005G045800 Sobic006G156400--Sobic009G201000 Sobic006G156400--Sobic008G141100 Sobic009G178400 Sobic009G178400 Sobic006G156400--Sobic009G178400 Sobic009G121200 Sobic009G121200 Sobic006G156400--Sobic009G121200 Sobic009G202000 Sobic009G202000 Sobic006G156400--Sobic009G202000 Sobic005G048500 Sobic005G048500 Sobic006G156400--Sobic005G048500 Sobic001G387300 Sobic001G387300 Sobic006G156400--Sobic001G387300 Sobic006G156400--Sobic001G073700 Sobic009G113500 Sobic009G113500 Sobic006G156400--Sobic009G113500 Sobic006G265800--Sobic001G384200 Sobic006G134500 Sobic006G134500 Sobic006G265800--Sobic006G134500 Sobic001G400000 Sobic001G400000 Sobic006G265800--Sobic001G400000 Sobic006G265800--Sobic009G163100 Sobic006G265800--Sobic009G201000 Sobic003G024100 Sobic003G024100 Sobic006G265800--Sobic003G024100 Sobic008G156600 Sobic008G156600 Sobic006G265800--Sobic008G156600 Sobic003G244400 Sobic003G244400 Sobic006G265800--Sobic003G244400 Sobic006G265800--Sobic008G007600 Sobic001G308500--Sobic006G265800 Sobic008G085950 Sobic008G085950 Sobic001G308500--Sobic008G085950 Sobic001G308500--Sobic001G385300 Sobic001G308500--Sobic009G201000 Sobic001G308500--Sobic003G352900 Sobic010G274800 Sobic010G274800 Sobic001G308500--Sobic010G274800 Sobic001G308500--Sobic009G163100 Sobic004G298600 Sobic004G298600 Sobic001G308500--Sobic004G298600 Sobic001G308500--Sobic008G166100 Sobic001G076600--Sobic003G352900 Sobic001G076600--Sobic007G144100 Sobic001G076600--Sobic008G166100 Sobic004G038400 Sobic004G038400 Sobic001G076600--Sobic004G038400 Sobic001G076600--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic001G076600--Sobic004G045632 Sobic003G258100 Sobic003G258100 Sobic001G076600--Sobic003G258100 Sobic005G173700 Sobic005G173700 Sobic001G076600--Sobic005G173700 Sobic001G076600--Sobic003G376900 Sobic002G108100--Sobic003G342500 Sobic008G155400 Sobic008G155400 Sobic002G108100--Sobic008G155400 Sobic002G108100--Sobic005G045800 Sobic009G066200 Sobic009G066200 Sobic002G108100--Sobic009G066200 Sobic003G200000 Sobic003G200000 Sobic002G108100--Sobic003G200000 Sobic002G108100--Sobic003G352900 Sobic007G189100 Sobic007G189100 Sobic002G108100--Sobic007G189100 Sobic007G118050 Sobic007G118050 Sobic002G108100--Sobic007G118050 Sobic001G131900 Sobic001G131900 Sobic002G108100--Sobic001G131900
Octagon: transcription factors


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