Gene annotation
Transcriptome id Sobic.007G048900.3
Synonym Sb07g003980
Functional annotation OsFBX381 - F-box domain containing protein, expressed
UniProt C5YHB7
Pfam PF12937
Panther DB PTHR32133 PTHR32133:SF154
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g17930.1 : OsFBX381 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G506400 expressed protein -
2 Sobic.007G060100 expressed protein -
3 Sobic.004G168900 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
4 Sobic.010G263700 expressed protein -
5 Sobic.004G038400 fruit bromelain precursor, putative, expressed -
6 Sobic.001G034200 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
7 Sobic.010G263400 expressed protein -
8 Sobic.003G342500 methyltransferase, putative, expressed -
9 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C
10 Sobic.002G158300 ankyrin, putative, expressed -
11 Sobic.003G048400 - -
12 Sobic.001G135700 - -
13 Sobic.003G211800 expressed protein -
14 Sobic.005G063200 expressed protein -
15 Sobic.001G218600 MATH domain containing protein, expressed -
16 Sobic.010G057600 expressed protein -
17 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
18 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
19 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
20 Sobic.008G041300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3


Gene co-expression network
sample Sobic007G048900 Sobic007G048900 Sobic001G506400 Sobic001G506400 Sobic007G048900--Sobic001G506400 Sobic007G060100 Sobic007G060100 Sobic007G048900--Sobic007G060100 Sobic004G168900 Sobic004G168900 Sobic007G048900--Sobic004G168900 Sobic010G263700 Sobic010G263700 Sobic007G048900--Sobic010G263700 Sobic004G038400 Sobic004G038400 Sobic007G048900--Sobic004G038400 Sobic001G034200 Sobic001G034200 Sobic007G048900--Sobic001G034200 Sobic010G263400 Sobic010G263400 Sobic007G048900--Sobic010G263400 Sobic003G342500 Sobic003G342500 Sobic007G048900--Sobic003G342500 Sobic007G144100 Sobic007G144100 Sobic007G048900--Sobic007G144100 Sobic001G506400--Sobic007G144100 Sobic003G258100 Sobic003G258100 Sobic001G506400--Sobic003G258100 Sobic001G506400--Sobic001G034200 Sobic001G506400--Sobic004G038400 Sobic001G076600 Sobic001G076600 Sobic001G506400--Sobic001G076600 Sobic001G506400--Sobic007G048900 Sobic003G352900 Sobic003G352900 Sobic001G506400--Sobic003G352900 Sobic001G506400--Sobic004G168900 Sobic010G038300 Sobic010G038300 Sobic001G506400--Sobic010G038300 Sobic007G060100--Sobic010G263400 Sobic007G060100--Sobic004G168900 Sobic007G060100--Sobic004G038400 Sobic007G060100--Sobic001G506400 Sobic007G060100--Sobic007G144100 Sobic007G060100--Sobic003G258100 Sobic007G060100--Sobic007G048900 Sobic007G060100--Sobic001G076600 Sobic001G218600 Sobic001G218600 Sobic007G060100--Sobic001G218600 Sobic009G048700 Sobic009G048700 Sobic004G168900--Sobic009G048700 Sobic008G056600 Sobic008G056600 Sobic004G168900--Sobic008G056600 Sobic004G168900--Sobic010G038300 Sobic002G097200 Sobic002G097200 Sobic004G168900--Sobic002G097200 Sobic001G417700 Sobic001G417700 Sobic004G168900--Sobic001G417700 Sobic003G211800 Sobic003G211800 Sobic004G168900--Sobic003G211800 Sobic009G145000 Sobic009G145000 Sobic004G168900--Sobic009G145000 Sobic002G243400 Sobic002G243400 Sobic004G168900--Sobic002G243400 Sobic006G266400 Sobic006G266400 Sobic004G168900--Sobic006G266400 Sobic010G263700--Sobic001G034200 Sobic001G144150 Sobic001G144150 Sobic010G263700--Sobic001G144150 Sobic007G041100 Sobic007G041100 Sobic010G263700--Sobic007G041100 Sobic006G199500 Sobic006G199500 Sobic010G263700--Sobic006G199500 Sobic010G263700--Sobic004G168900 Sobic010G263700--Sobic009G048700 Sobic010G129450 Sobic010G129450 Sobic010G263700--Sobic010G129450 Sobic003G005700 Sobic003G005700 Sobic010G263700--Sobic003G005700 Sobic004G020200 Sobic004G020200 Sobic010G263700--Sobic004G020200 Sobic005G173700 Sobic005G173700 Sobic004G038400--Sobic005G173700 Sobic004G038400--Sobic009G048700 Sobic004G038400--Sobic001G076600 Sobic004G038400--Sobic004G168900 Sobic004G038400--Sobic003G005700 Sobic004G038400--Sobic007G144100 Sobic004G038400--Sobic002G243400 Sobic004G038400--Sobic008G056600 Sobic009G002100 Sobic009G002100 Sobic004G038400--Sobic009G002100 Sobic002G080450 Sobic002G080450 Sobic001G034200--Sobic002G080450 Sobic010G266600 Sobic010G266600 Sobic001G034200--Sobic010G266600 Sobic001G034200--Sobic010G038300 Sobic001G034200--Sobic004G168900 Sobic002G123300 Sobic002G123300 Sobic001G034200--Sobic002G123300 Sobic001G034200--Sobic010G129450 Sobic007G063800 Sobic007G063800 Sobic001G034200--Sobic007G063800 Sobic005G202901 Sobic005G202901 Sobic001G034200--Sobic005G202901 Sobic001G136000 Sobic001G136000 Sobic001G034200--Sobic001G136000 Sobic010G263400--Sobic007G060100 Sobic010G263400--Sobic003G258100 Sobic003G072700 Sobic003G072700 Sobic010G263400--Sobic003G072700 Sobic010G263400--Sobic007G144100 Sobic010G263400--Sobic004G168900 Sobic002G299500 Sobic002G299500 Sobic010G263400--Sobic002G299500 Sobic003G217800 Sobic003G217800 Sobic010G263400--Sobic003G217800 Sobic010G263400--Sobic004G038400 Sobic004G250800 Sobic004G250800 Sobic010G263400--Sobic004G250800 Sobic009G201000 Sobic009G201000 Sobic003G342500--Sobic009G201000 Sobic003G342500--Sobic003G352900 Sobic001G073700 Sobic001G073700 Sobic003G342500--Sobic001G073700 Sobic006G116900 Sobic006G116900 Sobic003G342500--Sobic006G116900 Sobic006G156400 Sobic006G156400 Sobic003G342500--Sobic006G156400 Sobic006G265800 Sobic006G265800 Sobic003G342500--Sobic006G265800 Sobic001G308500 Sobic001G308500 Sobic003G342500--Sobic001G308500 Sobic003G342500--Sobic001G076600 Sobic002G108100 Sobic002G108100 Sobic003G342500--Sobic002G108100 Sobic007G144100--Sobic003G258100 Sobic007G144100--Sobic003G352900 Sobic007G144100--Sobic001G076600 Sobic007G144100--Sobic003G217800 Sobic010G058300 Sobic010G058300 Sobic007G144100--Sobic010G058300 Sobic007G144100--Sobic001G506400 Sobic007G144100--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic007G144100--Sobic004G045632 Sobic007G144100--Sobic004G038400
Octagon: transcription factors


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