Gene annotation
Transcriptome id Sobic.010G263700.2,Sobic.010G263700.1
Synonym
Functional annotation expressed protein
UniProt A0A194YMP4
Pfam PF07893
Panther DB PTHR33085:SF6 PTHR33085
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g01490.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.010G263700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G034200 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
2 Sobic.001G144150 - -
3 Sobic.007G041100 OsFBD16 - F-box and FBD domain containing protein, expressed -
4 Sobic.006G199500 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
5 Sobic.004G168900 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
6 Sobic.009G048700 expressed protein -
7 Sobic.010G129450 - -
8 Sobic.003G005700 AGC_PVPK_like_kin82y.4 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
9 Sobic.004G020200 expressed protein -
10 Sobic.005G052400 - -
11 Sobic.010G232300 ubiquitin family protein, expressed -
12 Sobic.002G097200 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
13 Sobic.003G075300 OsFBX64 - F-box domain containing protein, expressed -
14 Sobic.003G065700 expressed protein -
15 Sobic.002G243400 transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
16 Sobic.003G218000 ENT domain containing protein, expressed -
17 Sobic.010G012700 katanin p60 ATPase-containing subunit, putative, expressed -
18 Sobic.009G008000 transcription factor Dp, putative, expressed -
19 Sobic.008G007800 - -
20 Sobic.001G417700 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein


Gene co-expression network
sample Sobic010G263700 Sobic010G263700 Sobic001G034200 Sobic001G034200 Sobic010G263700--Sobic001G034200 Sobic001G144150 Sobic001G144150 Sobic010G263700--Sobic001G144150 Sobic007G041100 Sobic007G041100 Sobic010G263700--Sobic007G041100 Sobic006G199500 Sobic006G199500 Sobic010G263700--Sobic006G199500 Sobic004G168900 Sobic004G168900 Sobic010G263700--Sobic004G168900 Sobic009G048700 Sobic009G048700 Sobic010G263700--Sobic009G048700 Sobic010G129450 Sobic010G129450 Sobic010G263700--Sobic010G129450 Sobic003G005700 Sobic003G005700 Sobic010G263700--Sobic003G005700 Sobic004G020200 Sobic004G020200 Sobic010G263700--Sobic004G020200 Sobic002G080450 Sobic002G080450 Sobic001G034200--Sobic002G080450 Sobic010G266600 Sobic010G266600 Sobic001G034200--Sobic010G266600 Sobic010G038300 Sobic010G038300 Sobic001G034200--Sobic010G038300 Sobic001G034200--Sobic004G168900 Sobic002G123300 Sobic002G123300 Sobic001G034200--Sobic002G123300 Sobic001G034200--Sobic010G129450 Sobic007G063800 Sobic007G063800 Sobic001G034200--Sobic007G063800 Sobic005G202901 Sobic005G202901 Sobic001G034200--Sobic005G202901 Sobic001G136000 Sobic001G136000 Sobic001G034200--Sobic001G136000 Sobic005G191200 Sobic005G191200 Sobic001G144150--Sobic005G191200 Sobic010G014850 Sobic010G014850 Sobic001G144150--Sobic010G014850 Sobic003G075300 Sobic003G075300 Sobic001G144150--Sobic003G075300 SobicK028900 SobicK028900 Sobic001G144150--SobicK028900 Sobic010G158050 Sobic010G158050 Sobic001G144150--Sobic010G158050 Sobic003G406060 Sobic003G406060 Sobic001G144150--Sobic003G406060 Sobic010G012700 Sobic010G012700 Sobic001G144150--Sobic010G012700 Sobic005G201501 Sobic005G201501 Sobic001G144150--Sobic005G201501 Sobic008G164000 Sobic008G164000 Sobic001G144150--Sobic008G164000 Sobic007G041100--Sobic010G129450 Sobic005G037600 Sobic005G037600 Sobic007G041100--Sobic005G037600 Sobic002G060101 Sobic002G060101 Sobic007G041100--Sobic002G060101 Sobic005G077001 Sobic005G077001 Sobic007G041100--Sobic005G077001 Sobic007G041100--Sobic005G201501 Sobic005G052400 Sobic005G052400 Sobic007G041100--Sobic005G052400 Sobic005G058600 Sobic005G058600 Sobic007G041100--Sobic005G058600 Sobic002G014300 Sobic002G014300 Sobic007G041100--Sobic002G014300 Sobic003G133201 Sobic003G133201 Sobic007G041100--Sobic003G133201 Sobic006G199500--Sobic009G048700 Sobic009G008000 Sobic009G008000 Sobic006G199500--Sobic009G008000 Sobic002G097200 Sobic002G097200 Sobic006G199500--Sobic002G097200 Sobic001G417700 Sobic001G417700 Sobic006G199500--Sobic001G417700 Sobic009G145000 Sobic009G145000 Sobic006G199500--Sobic009G145000 Sobic002G243400 Sobic002G243400 Sobic006G199500--Sobic002G243400 Sobic006G199500--Sobic004G020200 Sobic006G199500--Sobic001G136000 Sobic008G155700 Sobic008G155700 Sobic006G199500--Sobic008G155700 Sobic004G168900--Sobic009G048700 Sobic008G056600 Sobic008G056600 Sobic004G168900--Sobic008G056600 Sobic004G168900--Sobic010G038300 Sobic004G168900--Sobic002G097200 Sobic004G168900--Sobic001G417700 Sobic003G211800 Sobic003G211800 Sobic004G168900--Sobic003G211800 Sobic004G168900--Sobic009G145000 Sobic004G168900--Sobic002G243400 Sobic006G266400 Sobic006G266400 Sobic004G168900--Sobic006G266400 Sobic009G048700--Sobic009G008000 Sobic009G048700--Sobic001G417700 Sobic009G048700--Sobic008G155700 Sobic009G048700--Sobic009G145000 Sobic007G094700 Sobic007G094700 Sobic009G048700--Sobic007G094700 Sobic009G048700--Sobic006G199500 Sobic004G203150 Sobic004G203150 Sobic009G048700--Sobic004G203150 Sobic002G418300 Sobic002G418300 Sobic009G048700--Sobic002G418300 Sobic007G219601 Sobic007G219601 Sobic009G048700--Sobic007G219601 Sobic009G060100 Sobic009G060100 Sobic010G129450--Sobic009G060100 Sobic010G129450--Sobic001G136000 Sobic010G129450--Sobic005G058600 Sobic007G082100 Sobic007G082100 Sobic010G129450--Sobic007G082100 Sobic010G129450--Sobic003G133201 Sobic003G191200 Sobic003G191200 Sobic010G129450--Sobic003G191200 Sobic010G123800 Sobic010G123800 Sobic010G129450--Sobic010G123800 Sobic005G058300 Sobic005G058300 Sobic010G129450--Sobic005G058300 Sobic007G081100 Sobic007G081100 Sobic010G129450--Sobic007G081100 Sobic003G005700--Sobic009G145000 Sobic001G432200 Sobic001G432200 Sobic003G005700--Sobic001G432200 Sobic001G133400 Sobic001G133400 Sobic003G005700--Sobic001G133400 Sobic003G005700--Sobic002G097200 Sobic003G005700--Sobic009G048700 Sobic007G109301 Sobic007G109301 Sobic003G005700--Sobic007G109301 Sobic003G005700--Sobic002G060101 Sobic007G212500 Sobic007G212500 Sobic003G005700--Sobic007G212500 Sobic002G364700 Sobic002G364700 Sobic003G005700--Sobic002G364700 Sobic004G020200--Sobic001G417700 Sobic004G020200--Sobic009G008000 Sobic004G020200--Sobic007G094700 Sobic004G020200--Sobic009G048700 Sobic004G020200--Sobic007G219601 Sobic004G020200--Sobic001G136000 Sobic004G020200--Sobic008G155700 Sobic004G020200--Sobic002G418300 Sobic004G020200--Sobic009G145000
Octagon: transcription factors


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