Gene annotation
Transcriptome id Sobic.006G199500.2,Sobic.006G199500.4,Sobic.006G199500.3
Synonym NHL8, Sb06g027150
Functional annotation ara54-like RING finger protein, putative, expressed
UniProt A0A1Z5RFF0 , A0A1Z5RES3 , A0A1B6PMS5
Pfam PF01485 PF05773
Panther DB PTHR11685 PTHR11685:SF18
NCBI CDD KOG1814; Predicted E3 ubiquitin ligase
KEGG Orthology K11971; RNF14, E3 ubiquitin-protein ligase RNF14
Gene Ontology GO:0005515; protein binding GO:0016567protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT1G32340 : NDR1/HIN1-like 8
RAP-DB (Rice) LOC_Os04g50760.1 : ara54-like RING finger protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT61746 , PNT61747
Barley HORVU2Hr1G106360.1 , HORVU2Hr1G106360.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G048700 expressed protein -
2 Sobic.009G008000 transcription factor Dp, putative, expressed -
3 Sobic.002G097200 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
4 Sobic.001G417700 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
5 Sobic.009G145000 early-responsive to dehydration protein-related, putative, expressed -
6 Sobic.002G243400 transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
7 Sobic.004G020200 expressed protein -
8 Sobic.001G136000 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
9 Sobic.008G155700 ankyrin repeat domain-containing protein 44, putative, expressed -
10 Sobic.007G094700 - -
11 Sobic.010G061600 - -
12 Sobic.007G128000 cytochrome P450, putative, expressed -
13 Sobic.008G056600 OsFBX237 - F-box domain containing protein, expressed -
14 Sobic.005G037600 - -
15 Sobic.003G211800 expressed protein -
16 Sobic.001G504800 expressed protein -
17 Sobic.002G418300 vacuolar-sorting receptor precursor, putative, expressed -
18 Sobic.007G219601 - -
19 Sobic.004G168900 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
20 Sobic.004G203150 - -


Gene co-expression network
sample Sobic006G199500 Sobic006G199500 Sobic009G048700 Sobic009G048700 Sobic006G199500--Sobic009G048700 Sobic009G008000 Sobic009G008000 Sobic006G199500--Sobic009G008000 Sobic002G097200 Sobic002G097200 Sobic006G199500--Sobic002G097200 Sobic001G417700 Sobic001G417700 Sobic006G199500--Sobic001G417700 Sobic009G145000 Sobic009G145000 Sobic006G199500--Sobic009G145000 Sobic002G243400 Sobic002G243400 Sobic006G199500--Sobic002G243400 Sobic004G020200 Sobic004G020200 Sobic006G199500--Sobic004G020200 Sobic001G136000 Sobic001G136000 Sobic006G199500--Sobic001G136000 Sobic008G155700 Sobic008G155700 Sobic006G199500--Sobic008G155700 Sobic009G048700--Sobic009G008000 Sobic009G048700--Sobic001G417700 Sobic009G048700--Sobic008G155700 Sobic009G048700--Sobic009G145000 Sobic007G094700 Sobic007G094700 Sobic009G048700--Sobic007G094700 Sobic009G048700--Sobic006G199500 Sobic004G203150 Sobic004G203150 Sobic009G048700--Sobic004G203150 Sobic002G418300 Sobic002G418300 Sobic009G048700--Sobic002G418300 Sobic007G219601 Sobic007G219601 Sobic009G048700--Sobic007G219601 Sobic009G008000--Sobic009G048700 Sobic009G008000--Sobic007G094700 Sobic009G008000--Sobic004G203150 Sobic009G008000--Sobic001G417700 Sobic009G008000--Sobic009G145000 Sobic009G008000--Sobic007G219601 Sobic009G008000--Sobic008G155700 Sobic009G008000--Sobic002G418300 Sobic002G189500 Sobic002G189500 Sobic009G008000--Sobic002G189500 Sobic002G060101 Sobic002G060101 Sobic002G097200--Sobic002G060101 Sobic005G037600 Sobic005G037600 Sobic002G097200--Sobic005G037600 Sobic002G097200--Sobic006G199500 Sobic002G097200--Sobic009G048700 Sobic001G504800 Sobic001G504800 Sobic002G097200--Sobic001G504800 Sobic010G038300 Sobic010G038300 Sobic002G097200--Sobic010G038300 Sobic004G168900 Sobic004G168900 Sobic002G097200--Sobic004G168900 Sobic002G097200--Sobic009G145000 Sobic003G005700 Sobic003G005700 Sobic002G097200--Sobic003G005700 Sobic007G128000 Sobic007G128000 Sobic001G417700--Sobic007G128000 Sobic001G417700--Sobic002G418300 Sobic001G417700--Sobic007G094700 Sobic001G417700--Sobic009G145000 Sobic002G101600 Sobic002G101600 Sobic001G417700--Sobic002G101600 Sobic006G266400 Sobic006G266400 Sobic001G417700--Sobic006G266400 Sobic001G417700--Sobic001G136000 Sobic001G417700--Sobic002G189500 Sobic001G240600 Sobic001G240600 Sobic001G417700--Sobic001G240600 Sobic009G145000--Sobic002G189500 Sobic009G145000--Sobic001G417700 Sobic004G328200 Sobic004G328200 Sobic009G145000--Sobic004G328200 Sobic001G029300 Sobic001G029300 Sobic009G145000--Sobic001G029300 Sobic009G145000--Sobic006G266400 Sobic004G190400 Sobic004G190400 Sobic009G145000--Sobic004G190400 Sobic009G145000--Sobic009G008000 Sobic009G145000--Sobic004G203150 Sobic009G145000--Sobic007G094700 Sobic002G243400--Sobic009G145000 Sobic002G243400--Sobic001G417700 Sobic002G243400--Sobic009G048700 Sobic002G243400--Sobic002G189500 Sobic010G061600 Sobic010G061600 Sobic002G243400--Sobic010G061600 Sobic002G243400--Sobic009G008000 Sobic009G002100 Sobic009G002100 Sobic002G243400--Sobic009G002100 Sobic002G243400--Sobic002G418300 Sobic002G243400--Sobic004G190400 Sobic004G020200--Sobic001G417700 Sobic004G020200--Sobic009G008000 Sobic004G020200--Sobic007G094700 Sobic004G020200--Sobic009G048700 Sobic004G020200--Sobic007G219601 Sobic004G020200--Sobic001G136000 Sobic004G020200--Sobic008G155700 Sobic004G020200--Sobic002G418300 Sobic004G020200--Sobic009G145000 Sobic001G136000--Sobic007G128000 Sobic001G136000--Sobic001G417700 Sobic009G060100 Sobic009G060100 Sobic001G136000--Sobic009G060100 Sobic010G129450 Sobic010G129450 Sobic001G136000--Sobic010G129450 Sobic001G136000--Sobic002G101600 Sobic001G136000--Sobic006G266400 Sobic007G082100 Sobic007G082100 Sobic001G136000--Sobic007G082100 Sobic007G081100 Sobic007G081100 Sobic001G136000--Sobic007G081100 Sobic001G136000--Sobic001G240600 Sobic008G155700--Sobic007G094700 Sobic008G155700--Sobic001G417700 Sobic008G155700--Sobic002G418300 Sobic008G155700--Sobic004G203150 Sobic008G155700--Sobic009G048700 Sobic008G155700--Sobic007G219601 Sobic003G133600 Sobic003G133600 Sobic008G155700--Sobic003G133600 Sobic008G155700--Sobic009G008000 Sobic008G155700--Sobic009G145000
Octagon: transcription factors


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