Gene annotation
Transcriptome id Sobic.001G034200.1
Synonym
Functional annotation 60S ribosomal protein L36-2, putative, expressed
UniProt A0A1B6QH51
Pfam PF01158
Panther DB PTHR10114
NCBI CDD KOG3452; 60S ribosomal protein L36
KEGG Orthology K02920; RP-L36e, large subunit ribosomal protein L36e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT2G37600 : Ribosomal protein L36e family protein
RAP-DB (Rice) LOC_Os01g62350.1 : 60S ribosomal protein L36-2, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK12432 , KQK12431
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G080450 - -
2 Sobic.010G266600 calcium-dependent protein kinase CPK1 adapter protein 2, putative, expressed -
3 Sobic.010G038300 OsFBDUF33 - F-box and DUF domain containing protein, expressed -
4 Sobic.004G168900 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
5 Sobic.002G123300 expressed protein -
6 Sobic.010G129450 - -
7 Sobic.007G063800 - -
8 Sobic.005G202901 - -
9 Sobic.001G136000 PINHEAD, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
10 Sobic.001G417700 polyadenylate-binding protein, putative, expressed K13126: polyadenylate-binding protein
11 Sobic.005G077001 - -
12 Sobic.005G201501 - -
13 Sobic.007G041100 OsFBD16 - F-box and FBD domain containing protein, expressed -
14 Sobic.007G128000 cytochrome P450, putative, expressed -
15 Sobic.008G056600 OsFBX237 - F-box domain containing protein, expressed -
16 Sobic.003G133201 - -
17 Sobic.008G056800 expressed protein -
18 Sobic.005G052400 - -
19 Sobic.005G058600 csAtPR5, putative, expressed -
20 Sobic.008G029800 expressed protein -


Gene co-expression network
sample Sobic001G034200 Sobic001G034200 Sobic002G080450 Sobic002G080450 Sobic001G034200--Sobic002G080450 Sobic010G266600 Sobic010G266600 Sobic001G034200--Sobic010G266600 Sobic010G038300 Sobic010G038300 Sobic001G034200--Sobic010G038300 Sobic004G168900 Sobic004G168900 Sobic001G034200--Sobic004G168900 Sobic002G123300 Sobic002G123300 Sobic001G034200--Sobic002G123300 Sobic010G129450 Sobic010G129450 Sobic001G034200--Sobic010G129450 Sobic007G063800 Sobic007G063800 Sobic001G034200--Sobic007G063800 Sobic005G202901 Sobic005G202901 Sobic001G034200--Sobic005G202901 Sobic001G136000 Sobic001G136000 Sobic001G034200--Sobic001G136000 Sobic002G080450--Sobic001G136000 Sobic009G060100 Sobic009G060100 Sobic002G080450--Sobic009G060100 Sobic007G128000 Sobic007G128000 Sobic002G080450--Sobic007G128000 Sobic008G029800 Sobic008G029800 Sobic002G080450--Sobic008G029800 Sobic007G082100 Sobic007G082100 Sobic002G080450--Sobic007G082100 Sobic002G099700 Sobic002G099700 Sobic002G080450--Sobic002G099700 Sobic002G080450--Sobic002G123300 Sobic002G080450--Sobic010G129450 Sobic001G417700 Sobic001G417700 Sobic002G080450--Sobic001G417700 Sobic002G307400 Sobic002G307400 Sobic010G266600--Sobic002G307400 Sobic005G221675 Sobic005G221675 Sobic010G266600--Sobic005G221675 Sobic004G100300 Sobic004G100300 Sobic010G266600--Sobic004G100300 Sobic006G070032 Sobic006G070032 Sobic010G266600--Sobic006G070032 Sobic010G266600--Sobic008G029800 Sobic002G384900 Sobic002G384900 Sobic010G266600--Sobic002G384900 Sobic006G200300 Sobic006G200300 Sobic010G266600--Sobic006G200300 Sobic007G081800 Sobic007G081800 Sobic010G266600--Sobic007G081800 Sobic007G198900 Sobic007G198900 Sobic010G266600--Sobic007G198900 Sobic010G038300--Sobic007G063800 Sobic010G038300--Sobic005G202901 Sobic004G014200 Sobic004G014200 Sobic010G038300--Sobic004G014200 Sobic002G060101 Sobic002G060101 Sobic010G038300--Sobic002G060101 Sobic010G038300--Sobic006G070032 Sobic010G038300--Sobic008G029800 Sobic010G038300--Sobic010G266600 Sobic006G204500 Sobic006G204500 Sobic010G038300--Sobic006G204500 Sobic008G020800 Sobic008G020800 Sobic010G038300--Sobic008G020800 Sobic009G048700 Sobic009G048700 Sobic004G168900--Sobic009G048700 Sobic008G056600 Sobic008G056600 Sobic004G168900--Sobic008G056600 Sobic004G168900--Sobic010G038300 Sobic002G097200 Sobic002G097200 Sobic004G168900--Sobic002G097200 Sobic004G168900--Sobic001G417700 Sobic003G211800 Sobic003G211800 Sobic004G168900--Sobic003G211800 Sobic009G145000 Sobic009G145000 Sobic004G168900--Sobic009G145000 Sobic002G243400 Sobic002G243400 Sobic004G168900--Sobic002G243400 Sobic006G266400 Sobic006G266400 Sobic004G168900--Sobic006G266400 Sobic003G133600 Sobic003G133600 Sobic002G123300--Sobic003G133600 Sobic002G123300--Sobic002G080450 Sobic006G064450 Sobic006G064450 Sobic002G123300--Sobic006G064450 Sobic007G094700 Sobic007G094700 Sobic002G123300--Sobic007G094700 Sobic002G123300--Sobic001G417700 Sobic001G068066 Sobic001G068066 Sobic002G123300--Sobic001G068066 Sobic007G219601 Sobic007G219601 Sobic002G123300--Sobic007G219601 Sobic005G078000 Sobic005G078000 Sobic002G123300--Sobic005G078000 Sobic002G418300 Sobic002G418300 Sobic002G123300--Sobic002G418300 Sobic010G129450--Sobic009G060100 Sobic010G129450--Sobic001G136000 Sobic005G058600 Sobic005G058600 Sobic010G129450--Sobic005G058600 Sobic010G129450--Sobic007G082100 Sobic003G133201 Sobic003G133201 Sobic010G129450--Sobic003G133201 Sobic003G191200 Sobic003G191200 Sobic010G129450--Sobic003G191200 Sobic010G123800 Sobic010G123800 Sobic010G129450--Sobic010G123800 Sobic005G058300 Sobic005G058300 Sobic010G129450--Sobic005G058300 Sobic007G081100 Sobic007G081100 Sobic010G129450--Sobic007G081100 Sobic007G063800--Sobic010G038300 Sobic007G063800--Sobic005G202901 Sobic007G063800--Sobic010G266600 Sobic007G063800--Sobic006G204500 Sobic007G063800--Sobic004G014200 Sobic007G063800--Sobic006G070032 Sobic002G364700 Sobic002G364700 Sobic007G063800--Sobic002G364700 Sobic008G007600 Sobic008G007600 Sobic007G063800--Sobic008G007600 Sobic007G063800--Sobic008G029800 Sobic005G202901--Sobic006G070032 Sobic005G202901--Sobic004G014200 Sobic005G202901--Sobic010G038300 Sobic005G202901--Sobic008G020800 Sobic004G052600 Sobic004G052600 Sobic005G202901--Sobic004G052600 Sobic005G202901--Sobic008G029800 Sobic001G240700 Sobic001G240700 Sobic005G202901--Sobic001G240700 Sobic007G016700 Sobic007G016700 Sobic005G202901--Sobic007G016700 Sobic005G202901--Sobic007G198900 Sobic001G136000--Sobic007G128000 Sobic001G136000--Sobic001G417700 Sobic001G136000--Sobic009G060100 Sobic001G136000--Sobic010G129450 Sobic002G101600 Sobic002G101600 Sobic001G136000--Sobic002G101600 Sobic001G136000--Sobic006G266400 Sobic001G136000--Sobic007G082100 Sobic001G136000--Sobic007G081100 Sobic001G240600 Sobic001G240600 Sobic001G136000--Sobic001G240600
Octagon: transcription factors


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