Gene annotation
Transcriptome id Sobic.008G029800.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PB10
Pfam PF10275
Panther DB PTHR12931 PTHR12931:SF18
NCBI CDD KOG3991; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28120 : -
RAP-DB (Rice) LOC_Os04g55840.1 : expressed protein
MaizeGDB (Corn) Zm00025a053807 , Zm00025a053809
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G060100 alliin lyase precursor, putative, expressed K16903: L-tryptophan---pyruvate aminotransferase
2 Sobic.006G070032 - K01193: INV, beta-fructofuranosidase
3 Sobic.002G070100 OsFBX230 - F-box domain containing protein, expressed -
4 Sobic.006G017900 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
5 Sobic.007G082100 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.004G046700 OsFBLD3 - F-box, LRR and FBD domain containing protein, expressed -
7 Sobic.001G211700 MBTB33 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.010G123800 expressed protein -
9 Sobic.006G017700 expressed protein -
10 Sobic.007G081800 MBTB22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
11 Sobic.002G384900 expressed protein -
12 Sobic.002G182701 - -
13 Sobic.005G058300 expressed protein -
14 Sobic.004G100300 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.004G052600 - -
16 Sobic.005G000900 OsFBX103 - F-box domain containing protein, expressed -
17 Sobic.002G060101 - -
18 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
19 Sobic.005G140900 OsFBX230 - F-box domain containing protein, expressed -
20 Sobic.006G224400 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K12158: ubiquitin-like protein Nedd8
K04551: ubiquitin B


Gene co-expression network
sample Sobic008G029800 Sobic008G029800 Sobic009G060100 Sobic009G060100 Sobic008G029800--Sobic009G060100 Sobic006G070032 Sobic006G070032 Sobic008G029800--Sobic006G070032 Sobic002G070100 Sobic002G070100 Sobic008G029800--Sobic002G070100 Sobic006G017900 Sobic006G017900 Sobic008G029800--Sobic006G017900 Sobic007G082100 Sobic007G082100 Sobic008G029800--Sobic007G082100 Sobic004G046700 Sobic004G046700 Sobic008G029800--Sobic004G046700 Sobic001G211700 Sobic001G211700 Sobic008G029800--Sobic001G211700 Sobic010G123800 Sobic010G123800 Sobic008G029800--Sobic010G123800 Sobic006G017700 Sobic006G017700 Sobic008G029800--Sobic006G017700 Sobic005G058300 Sobic005G058300 Sobic009G060100--Sobic005G058300 Sobic009G060100--Sobic010G123800 Sobic007G081800 Sobic007G081800 Sobic009G060100--Sobic007G081800 Sobic009G060100--Sobic007G082100 Sobic009G060100--Sobic004G046700 Sobic006G224400 Sobic006G224400 Sobic009G060100--Sobic006G224400 Sobic007G167950 Sobic007G167950 Sobic009G060100--Sobic007G167950 Sobic005G087732 Sobic005G087732 Sobic009G060100--Sobic005G087732 Sobic007G110800 Sobic007G110800 Sobic009G060100--Sobic007G110800 Sobic002G156400 Sobic002G156400 Sobic006G070032--Sobic002G156400 Sobic008G138400 Sobic008G138400 Sobic006G070032--Sobic008G138400 Sobic008G020800 Sobic008G020800 Sobic006G070032--Sobic008G020800 Sobic002G097300 Sobic002G097300 Sobic006G070032--Sobic002G097300 Sobic005G189100 Sobic005G189100 Sobic006G070032--Sobic005G189100 Sobic001G240700 Sobic001G240700 Sobic006G070032--Sobic001G240700 Sobic005G140900 Sobic005G140900 Sobic006G070032--Sobic005G140900 Sobic001G089300 Sobic001G089300 Sobic006G070032--Sobic001G089300 Sobic002G006200 Sobic002G006200 Sobic006G070032--Sobic002G006200 Sobic002G070100--Sobic006G017700 Sobic002G384900 Sobic002G384900 Sobic002G070100--Sobic002G384900 Sobic002G182701 Sobic002G182701 Sobic002G070100--Sobic002G182701 Sobic002G070100--Sobic006G017900 Sobic005G000900 Sobic005G000900 Sobic002G070100--Sobic005G000900 Sobic002G070100--Sobic001G211700 Sobic002G070100--Sobic005G140900 Sobic002G070100--Sobic002G156400 Sobic002G070100--Sobic008G138400 Sobic006G017900--Sobic001G211700 Sobic006G017900--Sobic006G017700 Sobic006G017900--Sobic002G182701 Sobic006G017900--Sobic002G384900 Sobic006G017900--Sobic004G046700 Sobic006G017900--Sobic005G000900 Sobic006G017900--Sobic010G123800 Sobic006G017900--Sobic007G082100 Sobic004G100300 Sobic004G100300 Sobic006G017900--Sobic004G100300 Sobic003G191200 Sobic003G191200 Sobic007G082100--Sobic003G191200 Sobic007G082100--Sobic004G046700 Sobic007G082100--Sobic001G211700 Sobic007G082100--Sobic006G017900 Sobic007G082100--Sobic010G123800 Sobic007G082100--Sobic002G182701 Sobic007G082100--Sobic009G060100 Sobic007G031200 Sobic007G031200 Sobic007G082100--Sobic007G031200 Sobic007G082100--Sobic007G081800 Sobic004G046700--Sobic010G123800 Sobic004G046700--Sobic007G081800 Sobic004G046700--Sobic005G058300 Sobic004G046700--Sobic006G017900 Sobic004G046700--Sobic001G211700 Sobic004G046700--Sobic006G224400 Sobic004G046700--Sobic007G082100 Sobic004G046700--Sobic003G191200 Sobic004G046700--Sobic007G167950 Sobic001G211700--Sobic006G017900 Sobic001G211700--Sobic006G017700 Sobic001G211700--Sobic002G182701 Sobic001G211700--Sobic002G384900 Sobic001G211700--Sobic004G046700 Sobic001G211700--Sobic005G000900 Sobic001G211700--Sobic010G123800 Sobic001G211700--Sobic007G082100 Sobic001G211700--Sobic004G100300 Sobic010G123800--Sobic004G046700 Sobic010G123800--Sobic007G081800 Sobic010G123800--Sobic005G058300 Sobic010G123800--Sobic006G224400 Sobic010G123800--Sobic007G167950 Sobic010G123800--Sobic005G087732 Sobic010G123800--Sobic006G017900 Sobic010G123800--Sobic001G211700 Sobic010G123800--Sobic007G082100 Sobic006G017700--Sobic002G182701 Sobic006G017700--Sobic006G017900 Sobic006G017700--Sobic001G211700 Sobic006G017700--Sobic002G384900 Sobic006G017700--Sobic005G000900 Sobic006G017700--Sobic005G140900 Sobic006G017700--Sobic002G156400 Sobic009G182100 Sobic009G182100 Sobic006G017700--Sobic009G182100 Sobic006G017700--Sobic008G138400
Octagon: transcription factors


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