Gene annotation
Transcriptome id Sobic.005G063200.1
Synonym Sb05g005320
Functional annotation expressed protein
UniProt C5Y671
Pfam PF09758
Panther DB PTHR21481
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G28430 : -
RAP-DB (Rice) LOC_Os04g23210.1 : expressed protein
MaizeGDB (Corn) Zm00025a055778
Brachypodium KQJ82044 , KQJ82045 , KQJ82043 , PNT60800
Barley HORVU2Hr1G065910.12 , HORVU2Hr1G065910.13 , HORVU2Hr1G065910.10 , HORVU2Hr1G065910.15 , HORVU2Hr1G065910.14 , HORVU2Hr1G065910.3 , HORVU2Hr1G065910.2 , HORVU2Hr1G065910.1 , HORVU2Hr1G065910.7 , HORVU2Hr1G065910.6 , HORVU2Hr1G065910.5 , HORVU2Hr1G065910.4 , HORVU2Hr1G065910.9 , HORVU2Hr1G065910.8
Wheat TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2B02G289500 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2D02G269800 , TraesCS2A02G270700 , TraesCS2A02G270700 , TraesCS2A02G270700 , TraesCS2A02G270700 , TraesCS2A02G270700 , TraesCS2A02G270700 , TraesCS2A02G270700 , TraesCS2A02G270700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
3 Sobic.008G166100 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
4 Sobic.003G211800 expressed protein -
5 Sobic.001G149000 FAR1 family protein, expressed -
6 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
7 Sobic.002G097200 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
8 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
9 Sobic.009G106700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
10 Sobic.009G048700 expressed protein -
11 Sobic.007G039200 MYB family transcription factor, putative, expressed -
12 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
13 Sobic.003G411300 expressed protein -
14 Sobic.009G201000 hydrolase, acting on carbon-nitrogen, putative, expressed -
15 Sobic.003G024100 MRH1, putative, expressed -
16 Sobic.006G199500 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
17 Sobic.001G133400 - -
18 Sobic.007G142600 DUF593 domain containing protein, expressed -
19 Sobic.001G305900 GTP binding protein, putative, expressed -
20 Sobic.004G038400 fruit bromelain precursor, putative, expressed -


Gene co-expression network
sample Sobic005G063200 Sobic005G063200 Sobic001G384200 Sobic001G384200 Sobic005G063200--Sobic001G384200 Sobic001G280500 Sobic001G280500 Sobic005G063200--Sobic001G280500 Sobic008G166100 Sobic008G166100 Sobic005G063200--Sobic008G166100 Sobic003G211800 Sobic003G211800 Sobic005G063200--Sobic003G211800 Sobic001G149000 Sobic001G149000 Sobic005G063200--Sobic001G149000 Sobic001G076600 Sobic001G076600 Sobic005G063200--Sobic001G076600 Sobic002G097200 Sobic002G097200 Sobic005G063200--Sobic002G097200 Sobic003G385300 Sobic003G385300 Sobic005G063200--Sobic003G385300 Sobic009G106700 Sobic009G106700 Sobic005G063200--Sobic009G106700 Sobic003G024100 Sobic003G024100 Sobic001G384200--Sobic003G024100 Sobic001G340800 Sobic001G340800 Sobic001G384200--Sobic001G340800 Sobic001G384200--Sobic008G166100 Sobic009G178400 Sobic009G178400 Sobic001G384200--Sobic009G178400 Sobic001G370400 Sobic001G370400 Sobic001G384200--Sobic001G370400 Sobic003G244400 Sobic003G244400 Sobic001G384200--Sobic003G244400 Sobic001G432200 Sobic001G432200 Sobic001G384200--Sobic001G432200 Sobic003G175350 Sobic003G175350 Sobic001G384200--Sobic003G175350 Sobic007G039200 Sobic007G039200 Sobic001G384200--Sobic007G039200 Sobic002G414800 Sobic002G414800 Sobic001G280500--Sobic002G414800 Sobic001G280500--Sobic001G149000 Sobic001G280500--Sobic005G063200 Sobic001G280500--Sobic001G384200 Sobic001G280500--Sobic008G166100 Sobic008G022400 Sobic008G022400 Sobic001G280500--Sobic008G022400 Sobic010G160300 Sobic010G160300 Sobic001G280500--Sobic010G160300 Sobic001G424800 Sobic001G424800 Sobic001G280500--Sobic001G424800 Sobic006G265800 Sobic006G265800 Sobic001G280500--Sobic006G265800 Sobic008G166100--Sobic001G384200 Sobic008G166100--Sobic007G039200 Sobic008G166100--Sobic009G178400 Sobic001G322400 Sobic001G322400 Sobic008G166100--Sobic001G322400 Sobic008G166100--Sobic003G024100 Sobic009G202000 Sobic009G202000 Sobic008G166100--Sobic009G202000 Sobic008G166100--Sobic001G340800 Sobic001G387300 Sobic001G387300 Sobic008G166100--Sobic001G387300 Sobic008G166100--Sobic001G432200 Sobic002G418300 Sobic002G418300 Sobic003G211800--Sobic002G418300 Sobic001G417700 Sobic001G417700 Sobic003G211800--Sobic001G417700 Sobic009G048700 Sobic009G048700 Sobic003G211800--Sobic009G048700 Sobic009G145000 Sobic009G145000 Sobic003G211800--Sobic009G145000 Sobic009G008000 Sobic009G008000 Sobic003G211800--Sobic009G008000 Sobic002G243400 Sobic002G243400 Sobic003G211800--Sobic002G243400 Sobic008G056600 Sobic008G056600 Sobic003G211800--Sobic008G056600 Sobic001G136000 Sobic001G136000 Sobic003G211800--Sobic001G136000 Sobic002G099700 Sobic002G099700 Sobic003G211800--Sobic002G099700 Sobic004G077300 Sobic004G077300 Sobic001G149000--Sobic004G077300 Sobic008G152700 Sobic008G152700 Sobic001G149000--Sobic008G152700 Sobic001G149000--Sobic003G385300 Sobic009G046900 Sobic009G046900 Sobic001G149000--Sobic009G046900 Sobic001G149000--Sobic001G384200 Sobic001G149000--Sobic009G178400 Sobic001G149000--Sobic001G280500 Sobic001G149000--Sobic008G166100 Sobic001G149000--Sobic001G387300 Sobic003G352900 Sobic003G352900 Sobic001G076600--Sobic003G352900 Sobic007G144100 Sobic007G144100 Sobic001G076600--Sobic007G144100 Sobic001G076600--Sobic008G166100 Sobic004G038400 Sobic004G038400 Sobic001G076600--Sobic004G038400 Sobic002G299500 Sobic002G299500 Sobic001G076600--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic001G076600--Sobic004G045632 Sobic003G258100 Sobic003G258100 Sobic001G076600--Sobic003G258100 Sobic005G173700 Sobic005G173700 Sobic001G076600--Sobic005G173700 Sobic003G376900 Sobic003G376900 Sobic001G076600--Sobic003G376900 Sobic002G060101 Sobic002G060101 Sobic002G097200--Sobic002G060101 Sobic005G037600 Sobic005G037600 Sobic002G097200--Sobic005G037600 Sobic006G199500 Sobic006G199500 Sobic002G097200--Sobic006G199500 Sobic002G097200--Sobic009G048700 Sobic001G504800 Sobic001G504800 Sobic002G097200--Sobic001G504800 Sobic010G038300 Sobic010G038300 Sobic002G097200--Sobic010G038300 Sobic004G168900 Sobic004G168900 Sobic002G097200--Sobic004G168900 Sobic002G097200--Sobic009G145000 Sobic003G005700 Sobic003G005700 Sobic002G097200--Sobic003G005700 Sobic003G385300--Sobic001G149000 Sobic003G402800 Sobic003G402800 Sobic003G385300--Sobic003G402800 Sobic003G385300--Sobic004G077300 Sobic004G064200 Sobic004G064200 Sobic003G385300--Sobic004G064200 Sobic004G176200 Sobic004G176200 Sobic003G385300--Sobic004G176200 Sobic001G257800 Sobic001G257800 Sobic003G385300--Sobic001G257800 Sobic005G225500 Sobic005G225500 Sobic003G385300--Sobic005G225500 Sobic003G385300--Sobic007G039200 Sobic002G074800 Sobic002G074800 Sobic003G385300--Sobic002G074800 Sobic009G106700--Sobic003G211800 Sobic006G162500 Sobic006G162500 Sobic009G106700--Sobic006G162500 Sobic009G106700--Sobic009G145000 Sobic004G328200 Sobic004G328200 Sobic009G106700--Sobic004G328200 Sobic009G106700--Sobic002G418300 Sobic009G113500 Sobic009G113500 Sobic009G106700--Sobic009G113500 Sobic004G203150 Sobic004G203150 Sobic009G106700--Sobic004G203150 Sobic002G189500 Sobic002G189500 Sobic009G106700--Sobic002G189500 Sobic009G106700--Sobic005G225500
Octagon: transcription factors


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