Gene annotation
Transcriptome id Sobic.003G385300.1
Synonym Sb03g042430
Functional annotation Ser/Thr protein phosphatase family protein, putative, expressed
UniProt A0A1W0W0V1
Pfam PF00149
Panther DB PTHR14795 PTHR14795:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT3G03305 : Calcineurin-like metallo-phosphoesterase superfamily protein
RAP-DB (Rice) LOC_Os01g66920.1 : Ser/Thr protein phosphatase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a026463
Brachypodium PNT73362 , PNT73363 , PNT73364 , KQK10995
Barley HORVU3Hr1G090090.2 , HORVU3Hr1G090090.1 , HORVU3Hr1G090090.7 , HORVU3Hr1G090090.6 , HORVU3Hr1G090090.5 , HORVU3Hr1G090090.4
Wheat TraesCS3B02G433200 , TraesCS3D02G394400 , TraesCS3A02G400200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G149000 FAR1 family protein, expressed -
2 Sobic.003G402800 DUF647 domain containing protein, putative, expressed -
3 Sobic.004G077300 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
4 Sobic.004G064200 STE_PAK_Ste20_STLK.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
5 Sobic.004G176200 SacI homology domain containing protein, expressed -
6 Sobic.001G257800 myosin, putative, expressed K10357: myosin V
7 Sobic.005G225500 expressed protein -
8 Sobic.007G039200 MYB family transcription factor, putative, expressed -
9 Sobic.002G074800 - -
10 Sobic.001G340800 exocyst complex component 6, putative, expressed -
11 Sobic.001G384200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
12 Sobic.003G117800 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
13 Sobic.005G185500 - -
14 Sobic.002G389600 transcription regulator, putative, expressed -
15 Sobic.008G159701 - -
16 Sobic.008G152700 expressed protein K07541: GPI mannosyltransferase 1 subunit X
17 Sobic.006G150300 expressed protein -
18 Sobic.006G134500 calcium-binding mitochondrial protein anon-60Da, putative, expressed K17800: LETM1, LETM1 and EF-hand domain-containing protein 1, mitochondrial
19 Sobic.009G178400 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
20 Sobic.001G356200 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase


Gene co-expression network
sample Sobic003G385300 Sobic003G385300 Sobic001G149000 Sobic001G149000 Sobic003G385300--Sobic001G149000 Sobic003G402800 Sobic003G402800 Sobic003G385300--Sobic003G402800 Sobic004G077300 Sobic004G077300 Sobic003G385300--Sobic004G077300 Sobic004G064200 Sobic004G064200 Sobic003G385300--Sobic004G064200 Sobic004G176200 Sobic004G176200 Sobic003G385300--Sobic004G176200 Sobic001G257800 Sobic001G257800 Sobic003G385300--Sobic001G257800 Sobic005G225500 Sobic005G225500 Sobic003G385300--Sobic005G225500 Sobic007G039200 Sobic007G039200 Sobic003G385300--Sobic007G039200 Sobic002G074800 Sobic002G074800 Sobic003G385300--Sobic002G074800 Sobic001G149000--Sobic004G077300 Sobic008G152700 Sobic008G152700 Sobic001G149000--Sobic008G152700 Sobic001G149000--Sobic003G385300 Sobic009G046900 Sobic009G046900 Sobic001G149000--Sobic009G046900 Sobic001G384200 Sobic001G384200 Sobic001G149000--Sobic001G384200 Sobic009G178400 Sobic009G178400 Sobic001G149000--Sobic009G178400 Sobic001G280500 Sobic001G280500 Sobic001G149000--Sobic001G280500 Sobic008G166100 Sobic008G166100 Sobic001G149000--Sobic008G166100 Sobic001G387300 Sobic001G387300 Sobic001G149000--Sobic001G387300 Sobic003G402800--Sobic003G385300 Sobic003G402800--Sobic001G257800 Sobic008G055500 Sobic008G055500 Sobic003G402800--Sobic008G055500 Sobic003G402800--Sobic002G074800 Sobic005G048500 Sobic005G048500 Sobic003G402800--Sobic005G048500 Sobic005G185500 Sobic005G185500 Sobic003G402800--Sobic005G185500 Sobic003G402800--Sobic004G064200 Sobic003G402800--Sobic009G046900 Sobic003G402800--Sobic001G149000 Sobic004G077300--Sobic001G149000 Sobic004G077300--Sobic003G385300 Sobic004G077300--Sobic008G152700 Sobic004G077300--Sobic004G176200 Sobic001G378800 Sobic001G378800 Sobic004G077300--Sobic001G378800 Sobic006G080700 Sobic006G080700 Sobic004G077300--Sobic006G080700 Sobic004G077300--Sobic001G384200 Sobic004G350700 Sobic004G350700 Sobic004G077300--Sobic004G350700 Sobic002G180800 Sobic002G180800 Sobic004G077300--Sobic002G180800 Sobic010G114200 Sobic010G114200 Sobic004G064200--Sobic010G114200 Sobic003G014200 Sobic003G014200 Sobic004G064200--Sobic003G014200 Sobic006G143900 Sobic006G143900 Sobic004G064200--Sobic006G143900 Sobic010G179600 Sobic010G179600 Sobic004G064200--Sobic010G179600 Sobic009G068400 Sobic009G068400 Sobic004G064200--Sobic009G068400 Sobic001G117100 Sobic001G117100 Sobic004G064200--Sobic001G117100 Sobic001G225800 Sobic001G225800 Sobic004G064200--Sobic001G225800 Sobic009G152000 Sobic009G152000 Sobic004G064200--Sobic009G152000 Sobic008G036100 Sobic008G036100 Sobic004G064200--Sobic008G036100 Sobic004G176200--Sobic003G385300 Sobic002G103800 Sobic002G103800 Sobic004G176200--Sobic002G103800 Sobic007G004300 Sobic007G004300 Sobic004G176200--Sobic007G004300 Sobic004G176200--Sobic004G077300 Sobic004G176200--Sobic004G064200 Sobic004G176200--Sobic001G257800 Sobic004G176200--Sobic002G180800 Sobic001G356200 Sobic001G356200 Sobic004G176200--Sobic001G356200 Sobic004G176200--Sobic006G080700 Sobic001G257800--Sobic003G402800 Sobic001G257800--Sobic003G385300 Sobic010G134650 Sobic010G134650 Sobic001G257800--Sobic010G134650 Sobic001G257800--Sobic004G064200 Sobic010G024400 Sobic010G024400 Sobic001G257800--Sobic010G024400 Sobic001G257800--Sobic004G176200 Sobic001G257800--Sobic002G074800 Sobic004G261700 Sobic004G261700 Sobic001G257800--Sobic004G261700 Sobic001G257800--Sobic008G152700 Sobic006G001100 Sobic006G001100 Sobic005G225500--Sobic006G001100 Sobic008G159701 Sobic008G159701 Sobic005G225500--Sobic008G159701 Sobic002G106600 Sobic002G106600 Sobic005G225500--Sobic002G106600 Sobic005G003700 Sobic005G003700 Sobic005G225500--Sobic005G003700 Sobic007G070900 Sobic007G070900 Sobic005G225500--Sobic007G070900 Sobic004G290600 Sobic004G290600 Sobic005G225500--Sobic004G290600 Sobic004G308800 Sobic004G308800 Sobic005G225500--Sobic004G308800 Sobic007G176900 Sobic007G176900 Sobic005G225500--Sobic007G176900 Sobic006G205400 Sobic006G205400 Sobic005G225500--Sobic006G205400 Sobic001G340800 Sobic001G340800 Sobic007G039200--Sobic001G340800 Sobic002G389600 Sobic002G389600 Sobic007G039200--Sobic002G389600 Sobic009G061500 Sobic009G061500 Sobic007G039200--Sobic009G061500 Sobic008G136601 Sobic008G136601 Sobic007G039200--Sobic008G136601 Sobic009G230800 Sobic009G230800 Sobic007G039200--Sobic009G230800 Sobic007G039200--Sobic004G290600 Sobic007G039200--Sobic008G166100 Sobic007G039200--Sobic001G384200 Sobic007G039200--Sobic008G159701 Sobic002G074800--Sobic004G064200 Sobic002G074800--Sobic006G001100 Sobic006G204400 Sobic006G204400 Sobic002G074800--Sobic006G204400 Sobic002G074800--Sobic008G136601 Sobic002G074800--Sobic010G114200 Sobic002G074800--Sobic006G143900 Sobic004G228300 Sobic004G228300 Sobic002G074800--Sobic004G228300 Sobic002G074800--Sobic005G048500 Sobic008G136700 Sobic008G136700 Sobic002G074800--Sobic008G136700
Octagon: transcription factors


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