Gene annotation
Transcriptome id Sobic.004G176200.1
Synonym Sb04g022640, RHD4
Functional annotation SacI homology domain containing protein, expressed
UniProt C5XU88
Pfam PF02383
Panther DB PTHR11200 PTHR11200:SF160
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51460 : Phosphoinositide phosphatase family protein
RAP-DB (Rice) LOC_Os02g34884.1 : SacI homology domain containing protein, expressed
MaizeGDB (Corn) Zm00025a012691 , Zm00025a012706 , Zm00025a020658 , Zm00025a031599
Brachypodium KQJ92216 , KQJ92217 , KQJ92218
Barley HORVU1Hr1G088110.9 , HORVU1Hr1G088110.8 , HORVU1Hr1G088110.1 , HORVU1Hr1G088110.3 , HORVU1Hr1G088110.2 , HORVU1Hr1G088110.5 , HORVU1Hr1G088110.4 , HORVU1Hr1G088110.7 , HORVU1Hr1G088110.6 , HORVU1Hr1G002820.13 , HORVU1Hr1G002820.12 , HORVU1Hr1G002820.11 , HORVU1Hr1G002820.5 , HORVU1Hr1G002820.3 , HORVU1Hr1G002820.2 , HORVU1Hr1G088110.11 , HORVU1Hr1G088110.10 , HORVU1Hr1G088110.13
Wheat TraesCS1D02G020200 , TraesCS1A02G400300 , TraesCS1B02G024700 , TraesCS1D02G408100 , TraesCS1D02G408100 , TraesCS1B02G428900 , TraesCS1B02G428900 , TraesCS1B02G428900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
2 Sobic.002G103800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
3 Sobic.007G004300 phosphate/phosphoenolpyruvate translocator-related protein, putative, expressed -
4 Sobic.004G077300 guanine nucleotide exchange family protein, putative, expressed K18442: ARFGEF, brefeldin A-inhibited guanine nucleotide-exchange protein
5 Sobic.004G064200 STE_PAK_Ste20_STLK.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
6 Sobic.001G257800 myosin, putative, expressed K10357: myosin V
7 Sobic.002G180800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
8 Sobic.001G356200 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
9 Sobic.006G080700 CSLH1 - cellulose synthase-like family H, expressed -
10 Sobic.006G150300 expressed protein -
11 Sobic.004G107100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CID11, putative, expressed -
12 Sobic.010G114200 katanin p60 ATPase-containing subunit, putative, expressed -
13 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
14 Sobic.005G225500 expressed protein -
15 Sobic.002G389600 transcription regulator, putative, expressed -
16 Sobic.007G086900 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G402800 DUF647 domain containing protein, putative, expressed -
19 Sobic.004G042501 - -
20 Sobic.007G101600 - -


Gene co-expression network
sample Sobic004G176200 Sobic004G176200 Sobic003G385300 Sobic003G385300 Sobic004G176200--Sobic003G385300 Sobic002G103800 Sobic002G103800 Sobic004G176200--Sobic002G103800 Sobic007G004300 Sobic007G004300 Sobic004G176200--Sobic007G004300 Sobic004G077300 Sobic004G077300 Sobic004G176200--Sobic004G077300 Sobic004G064200 Sobic004G064200 Sobic004G176200--Sobic004G064200 Sobic001G257800 Sobic001G257800 Sobic004G176200--Sobic001G257800 Sobic002G180800 Sobic002G180800 Sobic004G176200--Sobic002G180800 Sobic001G356200 Sobic001G356200 Sobic004G176200--Sobic001G356200 Sobic006G080700 Sobic006G080700 Sobic004G176200--Sobic006G080700 Sobic001G149000 Sobic001G149000 Sobic003G385300--Sobic001G149000 Sobic003G402800 Sobic003G402800 Sobic003G385300--Sobic003G402800 Sobic003G385300--Sobic004G077300 Sobic003G385300--Sobic004G064200 Sobic003G385300--Sobic004G176200 Sobic003G385300--Sobic001G257800 Sobic005G225500 Sobic005G225500 Sobic003G385300--Sobic005G225500 Sobic007G039200 Sobic007G039200 Sobic003G385300--Sobic007G039200 Sobic002G074800 Sobic002G074800 Sobic003G385300--Sobic002G074800 Sobic010G114200 Sobic010G114200 Sobic002G103800--Sobic010G114200 Sobic006G150300 Sobic006G150300 Sobic002G103800--Sobic006G150300 Sobic001G241401 Sobic001G241401 Sobic002G103800--Sobic001G241401 Sobic007G112500 Sobic007G112500 Sobic002G103800--Sobic007G112500 Sobic005G135100 Sobic005G135100 Sobic002G103800--Sobic005G135100 Sobic002G103800--Sobic004G064200 Sobic007G176900 Sobic007G176900 Sobic002G103800--Sobic007G176900 Sobic004G042501 Sobic004G042501 Sobic002G103800--Sobic004G042501 Sobic006G097400 Sobic006G097400 Sobic002G103800--Sobic006G097400 Sobic007G004300--Sobic004G176200 Sobic006G115100 Sobic006G115100 Sobic007G004300--Sobic006G115100 Sobic007G004300--Sobic002G103800 Sobic007G004300--Sobic003G402800 Sobic008G055500 Sobic008G055500 Sobic007G004300--Sobic008G055500 Sobic003G235100 Sobic003G235100 Sobic007G004300--Sobic003G235100 Sobic007G004300--Sobic003G385300 Sobic009G252200 Sobic009G252200 Sobic007G004300--Sobic009G252200 Sobic007G004300--Sobic002G180800 Sobic004G077300--Sobic001G149000 Sobic004G077300--Sobic003G385300 Sobic008G152700 Sobic008G152700 Sobic004G077300--Sobic008G152700 Sobic004G077300--Sobic004G176200 Sobic001G378800 Sobic001G378800 Sobic004G077300--Sobic001G378800 Sobic004G077300--Sobic006G080700 Sobic001G384200 Sobic001G384200 Sobic004G077300--Sobic001G384200 Sobic004G350700 Sobic004G350700 Sobic004G077300--Sobic004G350700 Sobic004G077300--Sobic002G180800 Sobic004G064200--Sobic010G114200 Sobic003G014200 Sobic003G014200 Sobic004G064200--Sobic003G014200 Sobic006G143900 Sobic006G143900 Sobic004G064200--Sobic006G143900 Sobic010G179600 Sobic010G179600 Sobic004G064200--Sobic010G179600 Sobic009G068400 Sobic009G068400 Sobic004G064200--Sobic009G068400 Sobic001G117100 Sobic001G117100 Sobic004G064200--Sobic001G117100 Sobic001G225800 Sobic001G225800 Sobic004G064200--Sobic001G225800 Sobic009G152000 Sobic009G152000 Sobic004G064200--Sobic009G152000 Sobic008G036100 Sobic008G036100 Sobic004G064200--Sobic008G036100 Sobic001G257800--Sobic003G402800 Sobic001G257800--Sobic003G385300 Sobic010G134650 Sobic010G134650 Sobic001G257800--Sobic010G134650 Sobic001G257800--Sobic004G064200 Sobic010G024400 Sobic010G024400 Sobic001G257800--Sobic010G024400 Sobic001G257800--Sobic004G176200 Sobic001G257800--Sobic002G074800 Sobic004G261700 Sobic004G261700 Sobic001G257800--Sobic004G261700 Sobic001G257800--Sobic008G152700 Sobic002G180800--Sobic004G064200 Sobic002G180800--Sobic006G080700 Sobic002G180800--Sobic010G114200 Sobic008G054200 Sobic008G054200 Sobic002G180800--Sobic008G054200 Sobic002G180800--Sobic002G074800 Sobic009G007300 Sobic009G007300 Sobic002G180800--Sobic009G007300 Sobic002G180800--Sobic003G014200 Sobic002G180800--Sobic002G103800 Sobic003G024400 Sobic003G024400 Sobic002G180800--Sobic003G024400 Sobic004G113600 Sobic004G113600 Sobic001G356200--Sobic004G113600 Sobic001G400000 Sobic001G400000 Sobic001G356200--Sobic001G400000 Sobic001G356200--Sobic003G385300 Sobic001G356200--Sobic007G039200 Sobic001G424800 Sobic001G424800 Sobic001G356200--Sobic001G424800 Sobic004G107100 Sobic004G107100 Sobic001G356200--Sobic004G107100 Sobic003G089100 Sobic003G089100 Sobic001G356200--Sobic003G089100 Sobic003G117800 Sobic003G117800 Sobic001G356200--Sobic003G117800 Sobic006G134500 Sobic006G134500 Sobic001G356200--Sobic006G134500 Sobic006G080700--Sobic009G007300 Sobic006G080700--Sobic004G064200 Sobic006G080700--Sobic001G225800 Sobic008G078200 Sobic008G078200 Sobic006G080700--Sobic008G078200 Sobic006G080700--Sobic010G114200 Sobic005G110460 Sobic005G110460 Sobic006G080700--Sobic005G110460 Sobic006G080700--Sobic009G068400 Sobic006G080700--Sobic009G152000 Sobic006G080700--Sobic010G179600
Octagon: transcription factors


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