Gene annotation
Transcriptome id Sobic.002G180800.1
Synonym APM1, ATAPM1, Sb02g022933
Functional annotation puromycin-sensitive aminopeptidase, putative, expressed
UniProt A0A1B6QC55
Pfam PF11838 PF01433
Panther DB PTHR11533 PTHR11533:SF183
NCBI CDD -
KEGG Orthology K08776; puromycin-sensitive aminopeptidase
Gene Ontology GO:0008270; zinc ion binding GO:0008237metallopeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT4G33090 : aminopeptidase M1
RAP-DB (Rice) LOC_Os09g19790.1 : puromycin-sensitive aminopeptidase, putative, expressed
MaizeGDB (Corn) Zm00025a046663 , Zm00025a006031
Brachypodium KQJ89934 , KQJ98189
Barley HORVU5Hr1G057330.19 , HORVU5Hr1G057330.18 , HORVU5Hr1G057330.11 , HORVU5Hr1G057330.10 , HORVU5Hr1G057330.13 , HORVU5Hr1G057330.12 , HORVU5Hr1G057330.15 , HORVU5Hr1G057330.14 , HORVU5Hr1G057330.17 , HORVU5Hr1G057330.16 , HORVU5Hr1G057380.2 , HORVU5Hr1G057380.3 , HORVU5Hr1G057350.1 , HORVU4Hr1G003100.3 , HORVU4Hr1G003100.6 , HORVU4Hr1G003100.7 , HORVU4Hr1G003100.4 , HORVU4Hr1G003100.5 , HORVU5Hr1G057330.9 , HORVU5Hr1G057330.8 , HORVU4Hr1G003100.1 , HORVU5Hr1G057330.5 , HORVU5Hr1G057330.4 , HORVU5Hr1G057330.7 , HORVU5Hr1G057330.6 , HORVU5Hr1G057330.1 , HORVU5Hr1G057330.3 , HORVU5Hr1G057330.2 , HORVU4Hr1G003100.8 , HORVU4Hr1G003100.9 , HORVU5Hr1G057330.24 , HORVU5Hr1G057330.20 , HORVU5Hr1G057330.21 , HORVU5Hr1G057330.22 , HORVU5Hr1G057330.23 , HORVU4Hr1G003100.2
Wheat TraesCS5A02G194300 , TraesCS4A02G294100 , TraesCS4A02G294100 , TraesCS4A02G294100 , TraesCS5B02G189600 , TraesCS4D02G017700 , TraesCS4D02G017700 , TraesCS5B02G189500 , TraesCS5D02G196500 , TraesCS5D02G196500 , TraesCS5A02G194200 , TraesCS5A02G194100 , TraesCS5A02G194100 , TraesCS5A02G194100 , TraesCS5D02G196600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G064200 STE_PAK_Ste20_STLK.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
2 Sobic.006G080700 CSLH1 - cellulose synthase-like family H, expressed -
3 Sobic.010G114200 katanin p60 ATPase-containing subunit, putative, expressed -
4 Sobic.008G054200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@csAtPR5, putative, expressed -
5 Sobic.002G074800 - -
6 Sobic.009G007300 expressed protein -
7 Sobic.003G014200 protein kinase domain containing protein, expressed K08818: cell division cycle 2-like
8 Sobic.002G103800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
9 Sobic.003G024400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.8 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
10 Sobic.006G143900 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
11 Sobic.001G225800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CCT motif family protein, expressed -
12 Sobic.008G050200 - -
13 Sobic.003G022400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, acting on carbon-nitrogen, putative, expressed -
14 Sobic.003G385300 Ser/Thr protein phosphatase family protein, putative, expressed -
15 Sobic.006G150300 expressed protein -
16 Sobic.007G086900 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.009G152000 Yip1 domain containing protein, expressed -
18 Sobic.002G060000 OsFBX237 - F-box domain containing protein, expressed -
19 Sobic.004G176200 SacI homology domain containing protein, expressed -
20 Sobic.001G223700 - -


Gene co-expression network
sample Sobic002G180800 Sobic002G180800 Sobic004G064200 Sobic004G064200 Sobic002G180800--Sobic004G064200 Sobic006G080700 Sobic006G080700 Sobic002G180800--Sobic006G080700 Sobic010G114200 Sobic010G114200 Sobic002G180800--Sobic010G114200 Sobic008G054200 Sobic008G054200 Sobic002G180800--Sobic008G054200 Sobic002G074800 Sobic002G074800 Sobic002G180800--Sobic002G074800 Sobic009G007300 Sobic009G007300 Sobic002G180800--Sobic009G007300 Sobic003G014200 Sobic003G014200 Sobic002G180800--Sobic003G014200 Sobic002G103800 Sobic002G103800 Sobic002G180800--Sobic002G103800 Sobic003G024400 Sobic003G024400 Sobic002G180800--Sobic003G024400 Sobic004G064200--Sobic010G114200 Sobic004G064200--Sobic003G014200 Sobic006G143900 Sobic006G143900 Sobic004G064200--Sobic006G143900 Sobic010G179600 Sobic010G179600 Sobic004G064200--Sobic010G179600 Sobic009G068400 Sobic009G068400 Sobic004G064200--Sobic009G068400 Sobic001G117100 Sobic001G117100 Sobic004G064200--Sobic001G117100 Sobic001G225800 Sobic001G225800 Sobic004G064200--Sobic001G225800 Sobic009G152000 Sobic009G152000 Sobic004G064200--Sobic009G152000 Sobic008G036100 Sobic008G036100 Sobic004G064200--Sobic008G036100 Sobic006G080700--Sobic009G007300 Sobic006G080700--Sobic004G064200 Sobic006G080700--Sobic001G225800 Sobic008G078200 Sobic008G078200 Sobic006G080700--Sobic008G078200 Sobic006G080700--Sobic010G114200 Sobic005G110460 Sobic005G110460 Sobic006G080700--Sobic005G110460 Sobic006G080700--Sobic009G068400 Sobic006G080700--Sobic009G152000 Sobic006G080700--Sobic010G179600 Sobic005G055700 Sobic005G055700 Sobic010G114200--Sobic005G055700 Sobic010G114200--Sobic003G014200 Sobic006G150300 Sobic006G150300 Sobic010G114200--Sobic006G150300 Sobic001G241401 Sobic001G241401 Sobic010G114200--Sobic001G241401 Sobic010G114200--Sobic001G225800 Sobic002G060000 Sobic002G060000 Sobic010G114200--Sobic002G060000 Sobic007G133800 Sobic007G133800 Sobic010G114200--Sobic007G133800 Sobic002G126400 Sobic002G126400 Sobic010G114200--Sobic002G126400 Sobic010G114200--Sobic006G143900 Sobic008G054200--Sobic008G078200 Sobic008G054200--Sobic004G064200 Sobic008G054200--Sobic003G014200 Sobic004G168200 Sobic004G168200 Sobic008G054200--Sobic004G168200 Sobic008G054200--Sobic009G068400 Sobic007G198900 Sobic007G198900 Sobic008G054200--Sobic007G198900 Sobic008G054200--Sobic002G180800 Sobic004G046700 Sobic004G046700 Sobic008G054200--Sobic004G046700 Sobic001G211700 Sobic001G211700 Sobic008G054200--Sobic001G211700 Sobic002G074800--Sobic004G064200 Sobic006G001100 Sobic006G001100 Sobic002G074800--Sobic006G001100 Sobic006G204400 Sobic006G204400 Sobic002G074800--Sobic006G204400 Sobic008G136601 Sobic008G136601 Sobic002G074800--Sobic008G136601 Sobic002G074800--Sobic010G114200 Sobic002G074800--Sobic006G143900 Sobic004G228300 Sobic004G228300 Sobic002G074800--Sobic004G228300 Sobic005G048500 Sobic005G048500 Sobic002G074800--Sobic005G048500 Sobic008G136700 Sobic008G136700 Sobic002G074800--Sobic008G136700 Sobic009G007300--Sobic006G080700 Sobic009G007300--Sobic001G225800 Sobic009G007300--Sobic008G078200 Sobic009G007300--Sobic004G064200 Sobic009G007300--Sobic009G068400 Sobic009G007300--Sobic007G198900 Sobic009G007300--Sobic010G179600 Sobic009G007300--Sobic002G060000 Sobic009G007300--Sobic010G114200 Sobic002G073600 Sobic002G073600 Sobic003G014200--Sobic002G073600 Sobic009G256601 Sobic009G256601 Sobic003G014200--Sobic009G256601 Sobic005G054401 Sobic005G054401 Sobic003G014200--Sobic005G054401 Sobic003G133000 Sobic003G133000 Sobic003G014200--Sobic003G133000 Sobic001G269100 Sobic001G269100 Sobic003G014200--Sobic001G269100 Sobic003G351100 Sobic003G351100 Sobic003G014200--Sobic003G351100 Sobic010G240300 Sobic010G240300 Sobic003G014200--Sobic010G240300 Sobic006G005300 Sobic006G005300 Sobic003G014200--Sobic006G005300 Sobic007G160501 Sobic007G160501 Sobic003G014200--Sobic007G160501 Sobic002G103800--Sobic010G114200 Sobic002G103800--Sobic006G150300 Sobic002G103800--Sobic001G241401 Sobic007G112500 Sobic007G112500 Sobic002G103800--Sobic007G112500 Sobic005G135100 Sobic005G135100 Sobic002G103800--Sobic005G135100 Sobic002G103800--Sobic004G064200 Sobic007G176900 Sobic007G176900 Sobic002G103800--Sobic007G176900 Sobic004G042501 Sobic004G042501 Sobic002G103800--Sobic004G042501 Sobic006G097400 Sobic006G097400 Sobic002G103800--Sobic006G097400 Sobic001G106800 Sobic001G106800 Sobic003G024400--Sobic001G106800 Sobic003G024400--Sobic006G204400 Sobic007G086900 Sobic007G086900 Sobic003G024400--Sobic007G086900 Sobic003G024400--Sobic006G143900 Sobic003G024400--Sobic001G241401 Sobic002G030300 Sobic002G030300 Sobic003G024400--Sobic002G030300 Sobic003G024400--Sobic003G014200 Sobic003G024400--Sobic005G055700 Sobic002G111100 Sobic002G111100 Sobic003G024400--Sobic002G111100
Octagon: transcription factors


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