Gene annotation
Transcriptome id Sobic.003G014200.1
Synonym Sb03g001410
Functional annotation protein kinase domain containing protein, expressed
UniProt C5XKD3
Pfam PF07714
Panther DB PTHR24056 PTHR24056:SF186
NCBI CDD KOG0658; Glycogen synthase kinase-3 KOG0594Protein kinase PCTAIRE and related kinases KOG0659Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7
KEGG Orthology K08818; cell division cycle 2-like
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G63370 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os12g23930.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G073600 transporter family protein, putative, expressed -
2 Sobic.009G256601 - -
3 Sobic.005G054401 - -
4 Sobic.003G133000 major facilitator superfamily antiporter, putative, expressed -
5 Sobic.001G269100 lysosomal alpha-mannosidase precursor, putative, expressed -
6 Sobic.003G351100 - -
7 Sobic.010G240300 Os12bglu38 - beta-glucosidase/beta-mannosidase/exoglucanase homologue, expressed K05350: beta-glucosidase
8 Sobic.006G005300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
9 Sobic.007G160501 - -
10 Sobic.002G126400 - -
11 Sobic.002G194300 expressed protein -
12 Sobic.007G035200 - -
13 Sobic.010G090200 OsMADS63 - MADS-box family gene with MIKC , type-box, expressed -
14 Sobic.005G006400 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
15 Sobic.010G215000 fasciclin-like arabinogalactan precursor protein, putative, expressed -
16 Sobic.001G246001 - K10523: speckle-type POZ protein
17 Sobic.005G214800 - -
18 Sobic.003G007650 - -
19 Sobic.005G055700 - -
20 Sobic.008G086500 - -


Gene co-expression network
sample Sobic003G014200 Sobic003G014200 Sobic002G073600 Sobic002G073600 Sobic003G014200--Sobic002G073600 Sobic009G256601 Sobic009G256601 Sobic003G014200--Sobic009G256601 Sobic005G054401 Sobic005G054401 Sobic003G014200--Sobic005G054401 Sobic003G133000 Sobic003G133000 Sobic003G014200--Sobic003G133000 Sobic001G269100 Sobic001G269100 Sobic003G014200--Sobic001G269100 Sobic003G351100 Sobic003G351100 Sobic003G014200--Sobic003G351100 Sobic010G240300 Sobic010G240300 Sobic003G014200--Sobic010G240300 Sobic006G005300 Sobic006G005300 Sobic003G014200--Sobic006G005300 Sobic007G160501 Sobic007G160501 Sobic003G014200--Sobic007G160501 Sobic005G207700 Sobic005G207700 Sobic002G073600--Sobic005G207700 Sobic001G269200 Sobic001G269200 Sobic002G073600--Sobic001G269200 Sobic010G107800 Sobic010G107800 Sobic002G073600--Sobic010G107800 Sobic006G043101 Sobic006G043101 Sobic002G073600--Sobic006G043101 Sobic002G414000 Sobic002G414000 Sobic002G073600--Sobic002G414000 Sobic005G220500 Sobic005G220500 Sobic002G073600--Sobic005G220500 Sobic009G110800 Sobic009G110800 Sobic002G073600--Sobic009G110800 Sobic007G129800 Sobic007G129800 Sobic002G073600--Sobic007G129800 Sobic005G214800 Sobic005G214800 Sobic002G073600--Sobic005G214800 Sobic007G035200 Sobic007G035200 Sobic009G256601--Sobic007G035200 Sobic005G006400 Sobic005G006400 Sobic009G256601--Sobic005G006400 Sobic009G256601--Sobic003G351100 Sobic003G007650 Sobic003G007650 Sobic009G256601--Sobic003G007650 Sobic008G086500 Sobic008G086500 Sobic009G256601--Sobic008G086500 Sobic007G014000 Sobic007G014000 Sobic009G256601--Sobic007G014000 Sobic009G256601--Sobic010G240300 Sobic002G194300 Sobic002G194300 Sobic009G256601--Sobic002G194300 Sobic010G090200 Sobic010G090200 Sobic009G256601--Sobic010G090200 Sobic005G054401--Sobic010G107800 Sobic005G054401--Sobic001G269200 Sobic005G054401--Sobic007G129800 Sobic002G414300 Sobic002G414300 Sobic005G054401--Sobic002G414300 Sobic001G269600 Sobic001G269600 Sobic005G054401--Sobic001G269600 Sobic007G167000 Sobic007G167000 Sobic005G054401--Sobic007G167000 Sobic001G269700 Sobic001G269700 Sobic005G054401--Sobic001G269700 Sobic005G054401--Sobic002G414000 Sobic005G054401--Sobic005G220500 Sobic003G133000--Sobic010G090200 Sobic001G261416 Sobic001G261416 Sobic003G133000--Sobic001G261416 Sobic001G171300 Sobic001G171300 Sobic003G133000--Sobic001G171300 Sobic001G165700 Sobic001G165700 Sobic003G133000--Sobic001G165700 Sobic001G329200 Sobic001G329200 Sobic003G133000--Sobic001G329200 Sobic001G287400 Sobic001G287400 Sobic003G133000--Sobic001G287400 Sobic010G215000 Sobic010G215000 Sobic003G133000--Sobic010G215000 Sobic003G175950 Sobic003G175950 Sobic003G133000--Sobic003G175950 Sobic003G133000--Sobic007G014000 Sobic001G269100--Sobic003G175950 Sobic005G040700 Sobic005G040700 Sobic001G269100--Sobic005G040700 Sobic001G269100--Sobic001G329200 Sobic010G051000 Sobic010G051000 Sobic001G269100--Sobic010G051000 Sobic009G203900 Sobic009G203900 Sobic001G269100--Sobic009G203900 Sobic001G130500 Sobic001G130500 Sobic001G269100--Sobic001G130500 Sobic007G222100 Sobic007G222100 Sobic001G269100--Sobic007G222100 Sobic001G269100--Sobic001G287400 Sobic001G269100--Sobic001G171300 Sobic003G351100--Sobic007G160501 Sobic003G351100--Sobic002G194300 Sobic003G351100--Sobic010G215000 Sobic008G125801 Sobic008G125801 Sobic003G351100--Sobic008G125801 Sobic001G246001 Sobic001G246001 Sobic003G351100--Sobic001G246001 Sobic003G351100--Sobic005G214800 Sobic003G351100--Sobic009G110800 Sobic003G351100--Sobic010G090200 Sobic003G351100--Sobic005G006400 Sobic010G240300--Sobic005G006400 Sobic010G240300--Sobic007G014000 Sobic010G240300--Sobic008G086500 Sobic010G216100 Sobic010G216100 Sobic010G240300--Sobic010G216100 Sobic010G240300--Sobic007G035200 Sobic010G240300--Sobic010G090200 Sobic010G240300--Sobic003G007650 Sobic005G006100 Sobic005G006100 Sobic010G240300--Sobic005G006100 Sobic002G194201 Sobic002G194201 Sobic010G240300--Sobic002G194201 Sobic006G005300--Sobic001G165700 Sobic006G005300--Sobic001G171300 Sobic006G005300--Sobic001G287400 Sobic006G005300--Sobic010G215000 Sobic006G005300--Sobic001G329200 Sobic006G005300--Sobic003G175950 Sobic006G005300--Sobic001G261416 Sobic007G145500 Sobic007G145500 Sobic006G005300--Sobic007G145500 Sobic006G005300--Sobic001G130500 Sobic007G160501--Sobic003G351100 Sobic007G160501--Sobic001G246001 Sobic007G160501--Sobic005G214800 Sobic007G160501--Sobic009G110800 Sobic007G160501--Sobic010G215000 Sobic007G160501--Sobic008G125801 Sobic007G160501--Sobic002G194300 Sobic007G160501--Sobic002G414000 Sobic007G160501--Sobic006G043101
Octagon: transcription factors


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