Gene annotation
Transcriptome id Sobic.002G073600.1
Synonym Sb02g006150
Functional annotation transporter family protein, putative, expressed
UniProt C5XCQ4
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF52
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G26250 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os07g10590.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a030010 , Zm00025a045362 , Zm00025a046980 , Zm00025a001328 , Zm00025a053058
Brachypodium KQJ82921 , KQK22858 , KQJ95161 , KQJ82919 , KQK20404 , KQJ90241 , KQK00004
Barley HORVU1Hr1G075970.6 , HORVU1Hr1G075970.5 , HORVU1Hr1G075970.4 , HORVU1Hr1G075970.3 , HORVU1Hr1G075970.2 , HORVU1Hr1G075970.1 , HORVU4Hr1G067450.7 , HORVU4Hr1G067450.4 , HORVU4Hr1G067450.5 , HORVU4Hr1G067450.3 , HORVU4Hr1G067450.1 , HORVU4Hr1G067450.8 , HORVU6Hr1G084290.1 , HORVU6Hr1G084290.3 , HORVU6Hr1G084290.2 , HORVU6Hr1G084290.5 , HORVU6Hr1G084290.4 , HORVU6Hr1G084290.7 , HORVU6Hr1G084290.20 , HORVU6Hr1G084290.21 , HORVU6Hr1G084290.22 , HORVU6Hr1G084290.23 , HORVU6Hr1G084290.24 , HORVU6Hr1G084290.25 , HORVU2Hr1G064160.1 , HORVU2Hr1G064160.2 , HORVU2Hr1G064160.5 , HORVU2Hr1G064160.4 , HORVU2Hr1G064160.6 , HORVU2Hr1G064160.9 , HORVU5Hr1G065630.1 , HORVU5Hr1G065630.3 , HORVU5Hr1G065630.2 , HORVU5Hr1G065630.5 , HORVU5Hr1G065630.4 , HORVU5Hr1G065630.7 , HORVU5Hr1G065630.6 , HORVU4Hr1G067450.10 , HORVU2Hr1G064160.11 , HORVU2Hr1G064160.10 , HORVU2Hr1G064160.12 , HORVU6Hr1G084290.14 , HORVU6Hr1G084290.17 , HORVU6Hr1G084290.16 , HORVU6Hr1G084290.10 , HORVU6Hr1G084290.19 , HORVU6Hr1G084290.18 , HORVU6Hr1G084290.6 , HORVU6Hr1G084290.9 , HORVU6Hr1G084290.8 , HORVU5Hr1G054140.5 , HORVU5Hr1G054140.3 , HORVU5Hr1G054140.2 , HORVU5Hr1G054140.1
Wheat TraesCS6A02G351600 , TraesCS1D02G343200 , TraesCS5B02G001000 , TraesCS1A02G341100 , TraesCS5D02G549900 , TraesCS5D02G234100 , TraesCS5B02G225100 , TraesCS1B02G353800 , TraesCS5B02G225300 , TraesCS4A02G066200 , TraesCS4D02G243100 , TraesCS4B02G243500 , TraesCS2D02G264200 , TraesCS5A02G226500 , TraesCS4A02G314900 , TraesCS5D02G233900 , TraesCS5A02G226700 , TraesCS2A02G259500 , TraesCS2B02G282400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G207700 - -
2 Sobic.001G269200 "GDSL-like lipase/acylhydrolase, is the most likely gene associated with epicuticular wax deposition."(PubMedID : 28702690)@GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.010G107800 - -
4 Sobic.006G043101 - -
5 Sobic.002G414000 - -
6 Sobic.005G220500 pollen allergen, putative, expressed -
7 Sobic.009G110800 OsFBX430 - F-box domain containing protein, expressed -
8 Sobic.007G129800 expressed protein -
9 Sobic.005G214800 - -
10 Sobic.001G246001 - K10523: speckle-type POZ protein
11 Sobic.005G220400 pollen allergen, putative, expressed -
12 Sobic.002G082400 DUF567 domain containing protein, putative, expressed -
13 Sobic.007G167000 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
14 Sobic.003G445300 aquaporin protein, putative, expressed K09873: aquaporin TIP
15 Sobic.002G414300 - -
16 Sobic.001G269600 - -
17 Sobic.001G488950 - -
18 Sobic.001G269700 - -
19 Sobic.005G054401 - -
20 Sobic.003G175600 plant protein of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic002G073600 Sobic002G073600 Sobic005G207700 Sobic005G207700 Sobic002G073600--Sobic005G207700 Sobic001G269200 Sobic001G269200 Sobic002G073600--Sobic001G269200 Sobic010G107800 Sobic010G107800 Sobic002G073600--Sobic010G107800 Sobic006G043101 Sobic006G043101 Sobic002G073600--Sobic006G043101 Sobic002G414000 Sobic002G414000 Sobic002G073600--Sobic002G414000 Sobic005G220500 Sobic005G220500 Sobic002G073600--Sobic005G220500 Sobic009G110800 Sobic009G110800 Sobic002G073600--Sobic009G110800 Sobic007G129800 Sobic007G129800 Sobic002G073600--Sobic007G129800 Sobic005G214800 Sobic005G214800 Sobic002G073600--Sobic005G214800 Sobic005G207700--Sobic009G110800 Sobic005G207700--Sobic006G043101 Sobic005G207700--Sobic002G414000 Sobic005G207700--Sobic005G214800 Sobic001G246001 Sobic001G246001 Sobic005G207700--Sobic001G246001 Sobic005G207700--Sobic001G269200 Sobic005G207700--Sobic005G220500 Sobic005G207700--Sobic010G107800 Sobic003G445300 Sobic003G445300 Sobic005G207700--Sobic003G445300 Sobic001G269200--Sobic005G220500 Sobic001G269200--Sobic010G107800 Sobic001G269200--Sobic007G129800 Sobic001G269200--Sobic002G414000 Sobic002G082400 Sobic002G082400 Sobic001G269200--Sobic002G082400 Sobic007G167000 Sobic007G167000 Sobic001G269200--Sobic007G167000 Sobic001G269200--Sobic003G445300 Sobic001G269200--Sobic006G043101 Sobic005G220400 Sobic005G220400 Sobic001G269200--Sobic005G220400 Sobic010G107800--Sobic007G129800 Sobic010G107800--Sobic001G269200 Sobic010G107800--Sobic007G167000 Sobic002G414300 Sobic002G414300 Sobic010G107800--Sobic002G414300 Sobic010G107800--Sobic002G414000 Sobic010G107800--Sobic005G220500 Sobic001G269700 Sobic001G269700 Sobic010G107800--Sobic001G269700 Sobic001G269600 Sobic001G269600 Sobic010G107800--Sobic001G269600 Sobic010G107800--Sobic006G043101 Sobic006G043101--Sobic002G414000 Sobic006G043101--Sobic005G214800 Sobic006G043101--Sobic001G246001 Sobic006G043101--Sobic001G269200 Sobic006G043101--Sobic005G220400 Sobic006G043101--Sobic003G445300 Sobic006G043101--Sobic005G220500 Sobic006G043101--Sobic010G107800 Sobic006G043101--Sobic002G082400 Sobic002G414000--Sobic006G043101 Sobic002G414000--Sobic005G214800 Sobic002G414000--Sobic001G246001 Sobic002G414000--Sobic005G220400 Sobic002G414000--Sobic001G269200 Sobic002G414000--Sobic003G445300 Sobic002G414000--Sobic005G220500 Sobic002G414000--Sobic010G107800 Sobic002G414000--Sobic002G082400 Sobic005G220500--Sobic002G082400 Sobic005G220500--Sobic001G269200 Sobic005G220500--Sobic003G445300 Sobic005G220500--Sobic005G220400 Sobic005G220500--Sobic002G414000 Sobic003G175600 Sobic003G175600 Sobic005G220500--Sobic003G175600 Sobic005G220500--Sobic007G167000 Sobic005G220500--Sobic006G043101 Sobic005G220500--Sobic010G107800 Sobic009G110800--Sobic001G246001 Sobic009G110800--Sobic005G214800 Sobic007G160501 Sobic007G160501 Sobic009G110800--Sobic007G160501 Sobic009G110800--Sobic002G414000 Sobic009G110800--Sobic006G043101 Sobic003G351100 Sobic003G351100 Sobic009G110800--Sobic003G351100 Sobic009G110800--Sobic003G445300 Sobic009G110800--Sobic005G220400 Sobic008G125801 Sobic008G125801 Sobic009G110800--Sobic008G125801 Sobic007G129800--Sobic010G107800 Sobic007G129800--Sobic001G269200 Sobic007G129800--Sobic002G414300 Sobic007G129800--Sobic007G167000 Sobic007G129800--Sobic002G414000 Sobic007G129800--Sobic005G220500 Sobic007G129800--Sobic001G269700 Sobic007G129800--Sobic001G269600 Sobic007G129800--Sobic006G043101 Sobic005G214800--Sobic001G246001 Sobic005G214800--Sobic002G414000 Sobic005G214800--Sobic007G160501 Sobic005G214800--Sobic006G043101 Sobic005G214800--Sobic009G110800 Sobic005G214800--Sobic003G445300 Sobic005G214800--Sobic005G220400 Sobic005G214800--Sobic005G220500 Sobic005G214800--Sobic001G269200
Octagon: transcription factors


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