Gene annotation
Transcriptome id Sobic.006G143900.1,Sobic.006G143900.2
Synonym INT2, Sb06g022300, ATINT2
Functional annotation transporter family protein, putative, expressed
UniProt C5YBZ8
Pfam PF00083
Panther DB PTHR23500 PTHR23500:SF149
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology K08150; SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G30220 : inositol transporter 2
RAP-DB (Rice) LOC_Os04g43210.1,LOC_Os04g43210.2 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056363 , Zm00025a056488 , Zm00025a045026
Brachypodium KQJ83524 , PNT61456
Barley HORVU2Hr1G060210.9 , HORVU2Hr1G060210.8 , HORVU2Hr1G060210.3 , HORVU2Hr1G060210.7 , HORVU2Hr1G060210.6 , HORVU2Hr1G060210.5 , HORVU2Hr1G060210.4 , HORVU2Hr1G088770.1
Wheat TraesCS2D02G382200 , TraesCS2D02G382200 , TraesCS2A02G385500 , TraesCS2B02G402400 , TraesCS2B02G402400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G273600 RNA recognition motif containing protein, putative, expressed -
2 Sobic.005G145400 RNA recognition motif containing protein, putative, expressed -
3 Sobic.007G176900 beta-galactosidase precursor, putative, expressed -
4 Sobic.001G135950 - -
5 Sobic.004G295050 - -
6 Sobic.010G001200 CCT/B-box zinc finger protein, putative, expressed -
7 Sobic.005G037700 OsFBX378 - F-box domain containing protein, expressed -
8 Sobic.003G420500 Ca ATPase 3(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
9 Sobic.003G333100 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
10 Sobic.002G295800 STRUBBELIG-RECEPTOR FAMILY 5 precursor, putative, expressed -
11 Sobic.009G068400 SSRP1-like FACT complex subunit, putative, expressed K09272: structure-specific recognition protein 1
12 Sobic.002G125100 - -
13 Sobic.004G071900 expressed protein -
14 Sobic.008G043200 - -
15 Sobic.001G525600 fringe-related protein, putative, expressed -
16 Sobic.010G276100 transporter family protein, putative, expressed -
17 Sobic.009G175400 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
18 Sobic.002G254700 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
19 Sobic.004G099200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
20 Sobic.002G279900 beta-galactosidase precursor, putative, expressed -


Gene co-expression network
sample Sobic006G143900 Sobic006G143900 Sobic004G273600 Sobic004G273600 Sobic006G143900--Sobic004G273600 Sobic005G145400 Sobic005G145400 Sobic006G143900--Sobic005G145400 Sobic007G176900 Sobic007G176900 Sobic006G143900--Sobic007G176900 Sobic001G135950 Sobic001G135950 Sobic006G143900--Sobic001G135950 Sobic004G295050 Sobic004G295050 Sobic006G143900--Sobic004G295050 Sobic010G001200 Sobic010G001200 Sobic006G143900--Sobic010G001200 Sobic005G037700 Sobic005G037700 Sobic006G143900--Sobic005G037700 Sobic003G420500 Sobic003G420500 Sobic006G143900--Sobic003G420500 Sobic003G333100 Sobic003G333100 Sobic006G143900--Sobic003G333100 Sobic004G273600--Sobic010G001200 Sobic002G125100 Sobic002G125100 Sobic004G273600--Sobic002G125100 Sobic002G279900 Sobic002G279900 Sobic004G273600--Sobic002G279900 Sobic004G273600--Sobic005G145400 Sobic004G273600--Sobic001G135950 Sobic004G099200 Sobic004G099200 Sobic004G273600--Sobic004G099200 Sobic009G105100 Sobic009G105100 Sobic004G273600--Sobic009G105100 Sobic002G254700 Sobic002G254700 Sobic004G273600--Sobic002G254700 Sobic004G071900 Sobic004G071900 Sobic004G273600--Sobic004G071900 Sobic005G145400--Sobic003G420500 Sobic008G043200 Sobic008G043200 Sobic005G145400--Sobic008G043200 Sobic009G175400 Sobic009G175400 Sobic005G145400--Sobic009G175400 Sobic010G276100 Sobic010G276100 Sobic005G145400--Sobic010G276100 Sobic005G145400--Sobic004G099200 Sobic005G145400--Sobic001G135950 Sobic005G145400--Sobic005G037700 Sobic010G040400 Sobic010G040400 Sobic005G145400--Sobic010G040400 Sobic001G525600 Sobic001G525600 Sobic005G145400--Sobic001G525600 Sobic006G205400 Sobic006G205400 Sobic007G176900--Sobic006G205400 Sobic007G176900--Sobic003G333100 Sobic001G212500 Sobic001G212500 Sobic007G176900--Sobic001G212500 Sobic010G144700 Sobic010G144700 Sobic007G176900--Sobic010G144700 Sobic001G333700 Sobic001G333700 Sobic007G176900--Sobic001G333700 Sobic001G093100 Sobic001G093100 Sobic007G176900--Sobic001G093100 Sobic005G040700 Sobic005G040700 Sobic007G176900--Sobic005G040700 Sobic010G051000 Sobic010G051000 Sobic007G176900--Sobic010G051000 Sobic001G288400 Sobic001G288400 Sobic007G176900--Sobic001G288400 Sobic001G135950--Sobic004G071900 Sobic001G135950--Sobic002G125100 Sobic006G215500 Sobic006G215500 Sobic001G135950--Sobic006G215500 Sobic001G135950--Sobic004G099200 Sobic001G135950--Sobic002G279900 Sobic001G135950--Sobic010G001200 Sobic001G135950--Sobic001G525600 Sobic001G135950--Sobic005G145400 Sobic003G313200 Sobic003G313200 Sobic001G135950--Sobic003G313200 Sobic004G295050--Sobic001G135950 Sobic004G295050--Sobic005G145400 Sobic004G295050--Sobic003G420500 Sobic004G295050--Sobic005G037700 Sobic004G295050--Sobic001G525600 Sobic004G295050--Sobic004G099200 Sobic004G295050--Sobic002G125100 Sobic004G295050--Sobic010G001200 Sobic004G295050--Sobic004G071900 Sobic010G001200--Sobic001G135950 Sobic010G001200--Sobic002G279900 Sobic010G001200--Sobic004G099200 Sobic010G001200--Sobic004G071900 Sobic010G001200--Sobic002G125100 Sobic010G001200--Sobic001G525600 Sobic010G001200--Sobic005G145400 Sobic010G001200--Sobic006G215500 Sobic010G001200--Sobic003G420500 Sobic005G037700--Sobic003G420500 Sobic001G089400 Sobic001G089400 Sobic005G037700--Sobic001G089400 Sobic004G192600 Sobic004G192600 Sobic005G037700--Sobic004G192600 Sobic005G037700--Sobic005G145400 Sobic007G204200 Sobic007G204200 Sobic005G037700--Sobic007G204200 Sobic007G197000 Sobic007G197000 Sobic005G037700--Sobic007G197000 Sobic003G004000 Sobic003G004000 Sobic005G037700--Sobic003G004000 Sobic005G037700--Sobic008G043200 Sobic005G037700--Sobic001G525600 Sobic003G420500--Sobic005G145400 Sobic003G420500--Sobic005G037700 Sobic003G420500--Sobic008G043200 Sobic003G420500--Sobic001G525600 Sobic003G420500--Sobic001G089400 Sobic003G420500--Sobic004G192600 Sobic003G420500--Sobic004G099200 Sobic010G016200 Sobic010G016200 Sobic003G420500--Sobic010G016200 Sobic003G420500--Sobic007G197000 Sobic009G082900 Sobic009G082900 Sobic003G333100--Sobic009G082900 Sobic004G002800 Sobic004G002800 Sobic003G333100--Sobic004G002800 Sobic001G252900 Sobic001G252900 Sobic003G333100--Sobic001G252900 Sobic003G073540 Sobic003G073540 Sobic003G333100--Sobic003G073540 Sobic005G025600 Sobic005G025600 Sobic003G333100--Sobic005G025600 Sobic001G412900 Sobic001G412900 Sobic003G333100--Sobic001G412900 Sobic003G333100--Sobic010G144700 Sobic006G159000 Sobic006G159000 Sobic003G333100--Sobic006G159000 Sobic003G333100--Sobic001G093100
Octagon: transcription factors


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